RNA–Protein interactions for RNA: ENST00000344222.5

ZNF550-202, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-202ENST00000344222 AEBP2Q6ZN18 517 aaPredicted RBP13.55□□□□□ -0.24
ZNF550-202ENST00000344222 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
ZNF550-202ENST00000344222 PHF23Q9BUL5 403 aaPredicted RBP12.34□□□□□ -0.43
ZNF550-202ENST00000344222 NISCHQ9Y2I1 1504 aa12.14□□□□□ -0.47
ZNF550-202ENST00000344222 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
ZNF550-202ENST00000344222 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
ZNF550-202ENST00000344222 PLPPR3Q6T4P5 718 aa11.21□□□□□ -0.62
ZNF550-202ENST00000344222 ADRA2BP18089 450 aa11.15□□□□□ -0.63
ZNF550-202ENST00000344222 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
ZNF550-202ENST00000344222 KCNA4P22459 653 aa11.09□□□□□ -0.63
ZNF550-202ENST00000344222 HRCP23327 699 aa10.94□□□□□ -0.66
ZNF550-202ENST00000344222 SENP3Q9H4L4 574 aaPredicted RBP10.82□□□□□ -0.68
ZNF550-202ENST00000344222 PPP6R1Q9UPN7 881 aa10.82□□□□□ -0.68
ZNF550-202ENST00000344222 MYT1Q01538 1121 aa10.78□□□□□ -0.68
ZNF550-202ENST00000344222 MYO15BQ96JP2 1530 aa10.76□□□□□ -0.69
ZNF550-202ENST00000344222 CSRNP3Q8WYN3 585 aa10.74□□□□□ -0.69
ZNF550-202ENST00000344222 DNAJC5Q9H3Z4 198 aa10.68□□□□□ -0.7
ZNF550-202ENST00000344222 DNAJC5BQ9UF47 199 aa10.67□□□□□ -0.7
ZNF550-202ENST00000344222 ABCC9O60706 1549 aa10.64□□□□□ -0.71
ZNF550-202ENST00000344222 SCAF1Q9H7N4 1312 aaKnown RBP10.61□□□□□ -0.71
ZNF550-202ENST00000344222 DCAF1Q9Y4B6 1507 aa10.54□□□□□ -0.72
ZNF550-202ENST00000344222 SHROOM4Q9ULL8 1493 aa10.5□□□□□ -0.73
ZNF550-202ENST00000344222 PPARGC1BQ86YN6 1023 aaKnown RBP10.5□□□□□ -0.73
ZNF550-202ENST00000344222 TTBK1Q5TCY1 1321 aaPredicted RBP10.43□□□□□ -0.74
ZNF550-202ENST00000344222 SLC4A1APQ9BWU0 796 aaKnown RBP10.43□□□□□ -0.74
ZNF550-202ENST00000344222 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.75
ZNF550-202ENST00000344222 FOXD1Q16676 465 aa10.35□□□□□ -0.75
ZNF550-202ENST00000344222 RTN4Q9NQC3 1192 aaKnown RBP10.35□□□□□ -0.75
ZNF550-202ENST00000344222 ZBTB22O15209 634 aa10.34□□□□□ -0.75
ZNF550-202ENST00000344222 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
ZNF550-202ENST00000344222 NACADO15069 1562 aa10.25□□□□□ -0.77
ZNF550-202ENST00000344222 RB1CC1Q8TDY2 1594 aa10.22□□□□□ -0.77
ZNF550-202ENST00000344222 PPP4R3CPQ6ZMV5 832 aa10.16□□□□□ -0.78
ZNF550-202ENST00000344222 UNC13AQ9UPW8 1703 aa10.15□□□□□ -0.78
ZNF550-202ENST00000344222 PRKCSHP14314 528 aaPredicted RBP10.15□□□□□ -0.78
ZNF550-202ENST00000344222 PCGF6Q9BYE7 350 aa10.12□□□□□ -0.79
ZNF550-202ENST00000344222 ACIN1Q9UKV3 1341 aaKnown RBP10.11□□□□□ -0.79
ZNF550-202ENST00000344222 FAM9AQ8IZU1 332 aaPredicted RBP10.07□□□□□ -0.8
ZNF550-202ENST00000344222 BCL11AQ9H165 835 aa10.07□□□□□ -0.8
ZNF550-202ENST00000344222 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
ZNF550-202ENST00000344222 NEUROD1Q13562 356 aa10.05□□□□□ -0.8
ZNF550-202ENST00000344222 APLP2Q06481 763 aa10.03□□□□□ -0.8
ZNF550-202ENST00000344222 CUX2O14529 1486 aa10.03□□□□□ -0.8
ZNF550-202ENST00000344222 ZEB1P37275 1124 aaPredicted RBP9.93□□□□□ -0.82
ZNF550-202ENST00000344222 PIAS4Q8N2W9 510 aaPredicted RBP9.92□□□□□ -0.82
ZNF550-202ENST00000344222 BICRAQ9NZM4 1560 aa9.91□□□□□ -0.82
ZNF550-202ENST00000344222 TRIM26Q12899 539 aaPredicted RBP9.9□□□□□ -0.83
ZNF550-202ENST00000344222 GTF3C3Q9Y5Q9 886 aa9.89□□□□□ -0.83
ZNF550-202ENST00000344222 CECR2Q9BXF3 1484 aa9.86□□□□□ -0.83
ZNF550-202ENST00000344222 CC2D2AQ9P2K1 1620 aa9.85□□□□□ -0.83
ZNF550-202ENST00000344222 CENPBP07199 599 aaPredicted RBP9.78□□□□□ -0.84
ZNF550-202ENST00000344222 ANP32EQ9BTT0 268 aa9.77□□□□□ -0.84
ZNF550-202ENST00000344222 PEG3Q9GZU2 1588 aa9.75□□□□□ -0.85
ZNF550-202ENST00000344222 AMER1Q5JTC6 1135 aaPredicted RBP9.71□□□□□ -0.85
ZNF550-202ENST00000344222 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
ZNF550-202ENST00000344222 MAPK8IP2Q13387 824 aaPredicted RBP9.69□□□□□ -0.86
ZNF550-202ENST00000344222 TRIM41Q8WV44 630 aa9.68□□□□□ -0.86
ZNF550-202ENST00000344222 EIF4G1Q04637 1599 aaKnown RBP9.67□□□□□ -0.86
ZNF550-202ENST00000344222 ERICH6Q7L0X2 663 aa9.67□□□□□ -0.86
ZNF550-202ENST00000344222 FKBP8Q14318 412 aa9.66□□□□□ -0.86
ZNF550-202ENST00000344222 SMARCA2P51531 1590 aa9.6□□□□□ -0.87
ZNF550-202ENST00000344222 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
ZNF550-202ENST00000344222 FOXD4L1Q9NU39 408 aa9.59□□□□□ -0.87
ZNF550-202ENST00000344222 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
ZNF550-202ENST00000344222 LOC105371045A0A1W2PR82 267 aa9.54□□□□□ -0.88
ZNF550-202ENST00000344222 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
ZNF550-202ENST00000344222 DIEXFQ68CQ4 756 aaKnown RBP9.52□□□□□ -0.89
ZNF550-202ENST00000344222 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.89
ZNF550-202ENST00000344222 HMGXB3Q12766 1538 aa9.49□□□□□ -0.89
ZNF550-202ENST00000344222 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
ZNF550-202ENST00000344222 SUPT16HQ9Y5B9 1047 aaKnown RBP9.48□□□□□ -0.89
ZNF550-202ENST00000344222 BAZ1AQ9NRL2 1556 aaPredicted RBP9.47□□□□□ -0.89
ZNF550-202ENST00000344222 SUPT5HO00267 1087 aaKnown RBP9.47□□□□□ -0.89
ZNF550-202ENST00000344222 UBE2Q2Q8WVN8 375 aa9.41□□□□□ -0.9
ZNF550-202ENST00000344222 SLC4A2P04920 1241 aa9.4□□□□□ -0.9
ZNF550-202ENST00000344222 THOC2Q8NI27 1593 aaKnown RBP9.4□□□□□ -0.91
ZNF550-202ENST00000344222 MSH5O43196 834 aa9.38□□□□□ -0.91
ZNF550-202ENST00000344222 RSF1Q96T23 1441 aaPredicted RBP9.37□□□□□ -0.91
ZNF550-202ENST00000344222 WRNQ14191 1432 aaPredicted RBP eCLIP9.36□□□□□ -0.91
ZNF550-202ENST00000344222 ANO8Q9HCE9 1232 aaPredicted RBP9.35□□□□□ -0.91
ZNF550-202ENST00000344222 WDR97A6NE52 1622 aa9.33□□□□□ -0.92
ZNF550-202ENST00000344222 MIER1Q8N108 512 aa9.32□□□□□ -0.92
ZNF550-202ENST00000344222 ERCC6Q03468 1493 aa9.32□□□□□ -0.92
ZNF550-202ENST00000344222 SCRIBQ14160 1630 aa9.31□□□□□ -0.92
ZNF550-202ENST00000344222 TOP2AP11388 1531 aaKnown RBP9.31□□□□□ -0.92
ZNF550-202ENST00000344222 SMARCA4P51532 1647 aa9.31□□□□□ -0.92
ZNF550-202ENST00000344222 ZNF316A6NFI3 1004 aaPredicted RBP9.31□□□□□ -0.92
ZNF550-202ENST00000344222 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
ZNF550-202ENST00000344222 NCAPD3P42695 1498 aa9.24□□□□□ -0.93
ZNF550-202ENST00000344222 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
ZNF550-202ENST00000344222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.24□□□□□ -0.93
ZNF550-202ENST00000344222 ERICH6BQ5W0A0 696 aa9.23□□□□□ -0.93
ZNF550-202ENST00000344222 MROH2BQ7Z745 1585 aa9.22□□□□□ -0.93
ZNF550-202ENST00000344222 RBM19Q9Y4C8 960 aaKnown RBP9.22□□□□□ -0.93
ZNF550-202ENST00000344222 SALL2Q9Y467 1007 aaPredicted RBP9.21□□□□□ -0.94
ZNF550-202ENST00000344222 DCAF8L2P0C7V8 631 aa9.2□□□□□ -0.94
ZNF550-202ENST00000344222 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
ZNF550-202ENST00000344222 RIMBP3CA6NJZ7 1639 aa9.18□□□□□ -0.94
ZNF550-202ENST00000344222 RIMBP3BA6NNM3 1639 aa9.18□□□□□ -0.94
ZNF550-202ENST00000344222 RIMBP3Q9UFD9 1639 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms