RNA–Protein interactions for RNA: ENST00000325921.10

PRDM7-201, Transcript of PR/SET domain 7, humanhuman

TSL 1 (best)

Gene PRDM7, Length 2,442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM7-201ENST00000325921 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
PRDM7-201ENST00000325921 SHROOM4Q9ULL8 1493 aa20.21■□□□□ 0.83
PRDM7-201ENST00000325921 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
PRDM7-201ENST00000325921 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
PRDM7-201ENST00000325921 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
PRDM7-201ENST00000325921 MYO15BQ96JP2 1530 aa19.6■□□□□ 0.73
PRDM7-201ENST00000325921 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
PRDM7-201ENST00000325921 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
PRDM7-201ENST00000325921 HRCP23327 699 aa19.39■□□□□ 0.69
PRDM7-201ENST00000325921 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
PRDM7-201ENST00000325921 PCGF6Q9BYE7 350 aa19.16■□□□□ 0.66
PRDM7-201ENST00000325921 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
PRDM7-201ENST00000325921 ABCC9O60706 1549 aa18.97■□□□□ 0.63
PRDM7-201ENST00000325921 PPARGC1BQ86YN6 1023 aaKnown RBP18.9■□□□□ 0.62
PRDM7-201ENST00000325921 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
PRDM7-201ENST00000325921 TRIM26Q12899 539 aaPredicted RBP18.79■□□□□ 0.6
PRDM7-201ENST00000325921 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
PRDM7-201ENST00000325921 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
PRDM7-201ENST00000325921 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
PRDM7-201ENST00000325921 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
PRDM7-201ENST00000325921 NACADO15069 1562 aa18.42■□□□□ 0.54
PRDM7-201ENST00000325921 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
PRDM7-201ENST00000325921 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
PRDM7-201ENST00000325921 FAM9AQ8IZU1 332 aaPredicted RBP18.39■□□□□ 0.53
PRDM7-201ENST00000325921 WIZO95785 1651 aa18.29■□□□□ 0.52
PRDM7-201ENST00000325921 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
PRDM7-201ENST00000325921 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
PRDM7-201ENST00000325921 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
PRDM7-201ENST00000325921 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.48
PRDM7-201ENST00000325921 SCAF1Q9H7N4 1312 aaKnown RBP18■□□□□ 0.47
PRDM7-201ENST00000325921 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
PRDM7-201ENST00000325921 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
PRDM7-201ENST00000325921 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
PRDM7-201ENST00000325921 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
PRDM7-201ENST00000325921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
PRDM7-201ENST00000325921 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
PRDM7-201ENST00000325921 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
PRDM7-201ENST00000325921 CCER1Q8TC90 406 aaPredicted RBP17.89■□□□□ 0.45
PRDM7-201ENST00000325921 CEP162Q5TB80 1403 aa17.87■□□□□ 0.45
PRDM7-201ENST00000325921 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
PRDM7-201ENST00000325921 SOGA1O94964 1423 aa17.84■□□□□ 0.45
PRDM7-201ENST00000325921 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.45
PRDM7-201ENST00000325921 EEA1Q15075 1411 aa17.81■□□□□ 0.44
PRDM7-201ENST00000325921 ACIN1Q9UKV3 1341 aaKnown RBP17.75■□□□□ 0.43
PRDM7-201ENST00000325921 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
PRDM7-201ENST00000325921 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
PRDM7-201ENST00000325921 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.43
PRDM7-201ENST00000325921 NEUROD1Q13562 356 aa17.7■□□□□ 0.42
PRDM7-201ENST00000325921 GOLGA3Q08378 1498 aa17.67■□□□□ 0.42
PRDM7-201ENST00000325921 TTBK1Q5TCY1 1321 aaPredicted RBP17.66■□□□□ 0.42
PRDM7-201ENST00000325921 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
PRDM7-201ENST00000325921 UBTFP17480 764 aaKnown RBP17.63■□□□□ 0.41
PRDM7-201ENST00000325921 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
PRDM7-201ENST00000325921 KIF21BO75037 1637 aa17.57■□□□□ 0.4
PRDM7-201ENST00000325921 SYNJ1O43426 1573 aa17.56■□□□□ 0.4
PRDM7-201ENST00000325921 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
PRDM7-201ENST00000325921 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
PRDM7-201ENST00000325921 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
PRDM7-201ENST00000325921 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
PRDM7-201ENST00000325921 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
PRDM7-201ENST00000325921 CLIP1P30622 1438 aa17.48■□□□□ 0.39
PRDM7-201ENST00000325921 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
PRDM7-201ENST00000325921 VPS8Q8N3P4 1428 aa17.45■□□□□ 0.38
PRDM7-201ENST00000325921 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
PRDM7-201ENST00000325921 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
PRDM7-201ENST00000325921 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
PRDM7-201ENST00000325921 TOP2BQ02880 1626 aa17.33■□□□□ 0.36
PRDM7-201ENST00000325921 MIER1Q8N108 512 aa17.31■□□□□ 0.36
PRDM7-201ENST00000325921 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
PRDM7-201ENST00000325921 APLP2Q06481 763 aa17.27■□□□□ 0.35
PRDM7-201ENST00000325921 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
PRDM7-201ENST00000325921 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
PRDM7-201ENST00000325921 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
PRDM7-201ENST00000325921 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
PRDM7-201ENST00000325921 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
PRDM7-201ENST00000325921 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
PRDM7-201ENST00000325921 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
PRDM7-201ENST00000325921 RRBP1Q9P2E9 1410 aaKnown RBP17.11■□□□□ 0.33
PRDM7-201ENST00000325921 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
PRDM7-201ENST00000325921 CUX1P39880 1505 aa17.1■□□□□ 0.33
PRDM7-201ENST00000325921 CUX2O14529 1486 aa17.08■□□□□ 0.33
PRDM7-201ENST00000325921 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
PRDM7-201ENST00000325921 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
PRDM7-201ENST00000325921 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
PRDM7-201ENST00000325921 MYT1Q01538 1121 aa17.04■□□□□ 0.32
PRDM7-201ENST00000325921 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.31
PRDM7-201ENST00000325921 CFTRP13569 1480 aa16.99■□□□□ 0.31
PRDM7-201ENST00000325921 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
PRDM7-201ENST00000325921 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
PRDM7-201ENST00000325921 MAPKBP1O60336 1514 aa16.88■□□□□ 0.29
PRDM7-201ENST00000325921 IGF1RP08069 1367 aa16.87■□□□□ 0.29
PRDM7-201ENST00000325921 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
PRDM7-201ENST00000325921 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
PRDM7-201ENST00000325921 RAB3GAP2Q9H2M9 1393 aa16.86■□□□□ 0.29
PRDM7-201ENST00000325921 SUPT16HQ9Y5B9 1047 aaKnown RBP16.86■□□□□ 0.29
PRDM7-201ENST00000325921 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
PRDM7-201ENST00000325921 ITGAEP38570 1179 aa16.79■□□□□ 0.28
PRDM7-201ENST00000325921 SETD5Q9C0A6 1442 aa16.78■□□□□ 0.28
PRDM7-201ENST00000325921 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
PRDM7-201ENST00000325921 PHLDB1Q86UU1 1377 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms