RNA–Protein interactions for RNA: ENST00000305368.8

EPB41L4A-202, Transcript of erythrocyte membrane protein band 4.1 like 4A, humanhuman

TSL 1 (best)

Gene EPB41L4A, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L4A-202ENST00000305368 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
EPB41L4A-202ENST00000305368 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
EPB41L4A-202ENST00000305368 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
EPB41L4A-202ENST00000305368 SUPT5HO00267 1087 aaKnown RBP29.51■■■□□ 2.32
EPB41L4A-202ENST00000305368 HRCP23327 699 aa29.46■■■□□ 2.31
EPB41L4A-202ENST00000305368 ZCCHC6Q5VYS8 1495 aaKnown RBP29.26■■■□□ 2.27
EPB41L4A-202ENST00000305368 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.26
EPB41L4A-202ENST00000305368 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
EPB41L4A-202ENST00000305368 PCGF6Q9BYE7 350 aa28.93■■■□□ 2.22
EPB41L4A-202ENST00000305368 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
EPB41L4A-202ENST00000305368 PPARGC1BQ86YN6 1023 aaKnown RBP28.76■■■□□ 2.2
EPB41L4A-202ENST00000305368 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
EPB41L4A-202ENST00000305368 LOC105371045A0A1W2PR82 267 aa28.26■■■□□ 2.12
EPB41L4A-202ENST00000305368 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
EPB41L4A-202ENST00000305368 PELP1Q8IZL8 1130 aaKnown RBP27.92■■■□□ 2.06
EPB41L4A-202ENST00000305368 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
EPB41L4A-202ENST00000305368 ABCC9O60706 1549 aa27.77■■■□□ 2.04
EPB41L4A-202ENST00000305368 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
EPB41L4A-202ENST00000305368 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.02
EPB41L4A-202ENST00000305368 NACADO15069 1562 aa27.51■■□□□ 1.99
EPB41L4A-202ENST00000305368 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
EPB41L4A-202ENST00000305368 RSF1Q96T23 1441 aaPredicted RBP27.37■■□□□ 1.97
EPB41L4A-202ENST00000305368 FAM9AQ8IZU1 332 aaPredicted RBP27.25■■□□□ 1.95
EPB41L4A-202ENST00000305368 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.95
EPB41L4A-202ENST00000305368 ACIN1Q9UKV3 1341 aaKnown RBP27.1■■□□□ 1.93
EPB41L4A-202ENST00000305368 CECR2Q9BXF3 1484 aa27.07■■□□□ 1.92
EPB41L4A-202ENST00000305368 EHMT2Q96KQ7 1210 aa27.03■■□□□ 1.92
EPB41L4A-202ENST00000305368 NEUROD1Q13562 356 aa27■■□□□ 1.91
EPB41L4A-202ENST00000305368 MROH2BQ7Z745 1585 aa26.95■■□□□ 1.9
EPB41L4A-202ENST00000305368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.93■■□□□ 1.9
EPB41L4A-202ENST00000305368 CCER1Q8TC90 406 aaPredicted RBP26.88■■□□□ 1.89
EPB41L4A-202ENST00000305368 GTF3C3Q9Y5Q9 886 aa26.8■■□□□ 1.88
EPB41L4A-202ENST00000305368 WIZO95785 1651 aa26.79■■□□□ 1.88
EPB41L4A-202ENST00000305368 DIEXFQ68CQ4 756 aaKnown RBP26.78■■□□□ 1.88
EPB41L4A-202ENST00000305368 CENPBP07199 599 aaPredicted RBP26.77■■□□□ 1.88
EPB41L4A-202ENST00000305368 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.87
EPB41L4A-202ENST00000305368 MYT1Q01538 1121 aa26.73■■□□□ 1.87
EPB41L4A-202ENST00000305368 BAZ1AQ9NRL2 1556 aaPredicted RBP26.66■■□□□ 1.86
EPB41L4A-202ENST00000305368 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
EPB41L4A-202ENST00000305368 EIF4G1Q04637 1599 aaKnown RBP26.52■■□□□ 1.84
EPB41L4A-202ENST00000305368 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
EPB41L4A-202ENST00000305368 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
EPB41L4A-202ENST00000305368 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
EPB41L4A-202ENST00000305368 ZNF316A6NFI3 1004 aaPredicted RBP26.39■■□□□ 1.81
EPB41L4A-202ENST00000305368 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
EPB41L4A-202ENST00000305368 TTBK1Q5TCY1 1321 aaPredicted RBP26.36■■□□□ 1.81
EPB41L4A-202ENST00000305368 CEP162Q5TB80 1403 aa26.35■■□□□ 1.81
EPB41L4A-202ENST00000305368 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
EPB41L4A-202ENST00000305368 TNIKQ9UKE5 1360 aa26.25■■□□□ 1.79
EPB41L4A-202ENST00000305368 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
EPB41L4A-202ENST00000305368 YTHDC1Q96MU7 727 aaKnown RBP26.21■■□□□ 1.79
EPB41L4A-202ENST00000305368 SMARCA2P51531 1590 aa26.21■■□□□ 1.79
EPB41L4A-202ENST00000305368 SOGA1O94964 1423 aa26.15■■□□□ 1.78
EPB41L4A-202ENST00000305368 MIER1Q8N108 512 aa26.13■■□□□ 1.77
EPB41L4A-202ENST00000305368 EEA1Q15075 1411 aa26.06■■□□□ 1.76
EPB41L4A-202ENST00000305368 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
EPB41L4A-202ENST00000305368 UBTFP17480 764 aaKnown RBP25.99■■□□□ 1.75
EPB41L4A-202ENST00000305368 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
EPB41L4A-202ENST00000305368 RUSC2Q8N2Y8 1516 aa25.99■■□□□ 1.75
EPB41L4A-202ENST00000305368 GOLGA3Q08378 1498 aa25.95■■□□□ 1.75
EPB41L4A-202ENST00000305368 HNRNPUL2Q1KMD3 747 aaKnown RBP25.89■■□□□ 1.74
EPB41L4A-202ENST00000305368 ATAD2BQ9ULI0 1458 aa25.89■■□□□ 1.74
EPB41L4A-202ENST00000305368 BAZ1BQ9UIG0 1483 aaKnown RBP25.8■■□□□ 1.72
EPB41L4A-202ENST00000305368 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
EPB41L4A-202ENST00000305368 CLSPNQ9HAW4 1339 aa25.7■■□□□ 1.7
EPB41L4A-202ENST00000305368 CLIP1P30622 1438 aa25.7■■□□□ 1.7
EPB41L4A-202ENST00000305368 KIF21BO75037 1637 aa25.7■■□□□ 1.7
EPB41L4A-202ENST00000305368 VPS8Q8N3P4 1428 aa25.69■■□□□ 1.7
EPB41L4A-202ENST00000305368 SUPT16HQ9Y5B9 1047 aaKnown RBP25.64■■□□□ 1.69
EPB41L4A-202ENST00000305368 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
EPB41L4A-202ENST00000305368 APLP2Q06481 763 aa25.55■■□□□ 1.68
EPB41L4A-202ENST00000305368 DHX57Q6P158 1386 aaKnown RBP25.52■■□□□ 1.68
EPB41L4A-202ENST00000305368 RAPGEF2Q9Y4G8 1499 aa25.46■■□□□ 1.67
EPB41L4A-202ENST00000305368 NCAPD3P42695 1498 aa25.45■■□□□ 1.66
EPB41L4A-202ENST00000305368 TSHZ2Q9NRE2 1034 aa25.45■■□□□ 1.66
EPB41L4A-202ENST00000305368 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
EPB41L4A-202ENST00000305368 ANP32EQ9BTT0 268 aa25.33■■□□□ 1.65
EPB41L4A-202ENST00000305368 RANGAP1P46060 587 aaPredicted RBP25.32■■□□□ 1.64
EPB41L4A-202ENST00000305368 TOP2BQ02880 1626 aa25.27■■□□□ 1.64
EPB41L4A-202ENST00000305368 ARAP1Q96P48 1450 aa25.22■■□□□ 1.63
EPB41L4A-202ENST00000305368 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
EPB41L4A-202ENST00000305368 KANK4Q5T7N3 995 aaPredicted RBP25.21■■□□□ 1.63
EPB41L4A-202ENST00000305368 CUX2O14529 1486 aa25.2■■□□□ 1.62
EPB41L4A-202ENST00000305368 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
EPB41L4A-202ENST00000305368 KCNH8Q96L42 1107 aa25.15■■□□□ 1.62
EPB41L4A-202ENST00000305368 CFTRP13569 1480 aa25.15■■□□□ 1.62
EPB41L4A-202ENST00000305368 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.62
EPB41L4A-202ENST00000305368 CUX1P39880 1505 aa25.11■■□□□ 1.61
EPB41L4A-202ENST00000305368 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
EPB41L4A-202ENST00000305368 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
EPB41L4A-202ENST00000305368 BCANQ96GW7 911 aa25.03■■□□□ 1.6
EPB41L4A-202ENST00000305368 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
EPB41L4A-202ENST00000305368 BCL11AQ9H165 835 aa25■■□□□ 1.59
EPB41L4A-202ENST00000305368 MAPKBP1O60336 1514 aa24.99■■□□□ 1.59
EPB41L4A-202ENST00000305368 FKBP8Q14318 412 aa24.99■■□□□ 1.59
EPB41L4A-202ENST00000305368 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
EPB41L4A-202ENST00000305368 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
EPB41L4A-202ENST00000305368 RAB3GAP2Q9H2M9 1393 aa24.94■■□□□ 1.58
EPB41L4A-202ENST00000305368 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
EPB41L4A-202ENST00000305368 ITGAEP38570 1179 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms