RNA–Protein interactions for RNA: ENST00000254299.8

GCH1-201, Transcript of GTP cyclohydrolase 1, humanhuman

TSL 1 (best)

Gene GCH1, Length 2,901 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCH1-201ENST00000254299 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
GCH1-201ENST00000254299 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
GCH1-201ENST00000254299 SUPT5HO00267 1087 aaKnown RBP27.84■■■□□ 2.05
GCH1-201ENST00000254299 CCDC180Q9P1Z9 1646 aa27.51■■■□□ 2
GCH1-201ENST00000254299 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
GCH1-201ENST00000254299 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
GCH1-201ENST00000254299 MYO15BQ96JP2 1530 aa27.04■■□□□ 1.92
GCH1-201ENST00000254299 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
GCH1-201ENST00000254299 PCGF6Q9BYE7 350 aa26.78■■□□□ 1.88
GCH1-201ENST00000254299 HRCP23327 699 aa26.75■■□□□ 1.87
GCH1-201ENST00000254299 PPARGC1BQ86YN6 1023 aaKnown RBP26.61■■□□□ 1.85
GCH1-201ENST00000254299 LOC105371045A0A1W2PR82 267 aa26.5■■□□□ 1.83
GCH1-201ENST00000254299 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
GCH1-201ENST00000254299 ABCC9O60706 1549 aa25.95■■□□□ 1.74
GCH1-201ENST00000254299 EHMT2Q96KQ7 1210 aa25.94■■□□□ 1.74
GCH1-201ENST00000254299 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
GCH1-201ENST00000254299 TRIM26Q12899 539 aaPredicted RBP25.81■■□□□ 1.72
GCH1-201ENST00000254299 SCRIBQ14160 1630 aa25.79■■□□□ 1.72
GCH1-201ENST00000254299 TRIM41Q8WV44 630 aa25.64■■□□□ 1.69
GCH1-201ENST00000254299 NACADO15069 1562 aa25.56■■□□□ 1.68
GCH1-201ENST00000254299 RSF1Q96T23 1441 aaPredicted RBP25.53■■□□□ 1.68
GCH1-201ENST00000254299 RB1CC1Q8TDY2 1594 aa25.4■■□□□ 1.66
GCH1-201ENST00000254299 CECR2Q9BXF3 1484 aa25.22■■□□□ 1.63
GCH1-201ENST00000254299 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
GCH1-201ENST00000254299 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
GCH1-201ENST00000254299 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
GCH1-201ENST00000254299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.08■■□□□ 1.61
GCH1-201ENST00000254299 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
GCH1-201ENST00000254299 UNC13AQ9UPW8 1703 aa24.91■■□□□ 1.58
GCH1-201ENST00000254299 WIZO95785 1651 aa24.91■■□□□ 1.58
GCH1-201ENST00000254299 CCER1Q8TC90 406 aaPredicted RBP24.89■■□□□ 1.57
GCH1-201ENST00000254299 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
GCH1-201ENST00000254299 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
GCH1-201ENST00000254299 NEUROD1Q13562 356 aa24.67■■□□□ 1.54
GCH1-201ENST00000254299 ABCC8Q09428 1581 aa24.64■■□□□ 1.53
GCH1-201ENST00000254299 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
GCH1-201ENST00000254299 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
GCH1-201ENST00000254299 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
GCH1-201ENST00000254299 DIEXFQ68CQ4 756 aaKnown RBP24.55■■□□□ 1.52
GCH1-201ENST00000254299 ACIN1Q9UKV3 1341 aaKnown RBP24.55■■□□□ 1.52
GCH1-201ENST00000254299 SOGA1O94964 1423 aa24.49■■□□□ 1.51
GCH1-201ENST00000254299 UBTFP17480 764 aaKnown RBP24.46■■□□□ 1.51
GCH1-201ENST00000254299 PELP1Q8IZL8 1130 aaKnown RBP24.46■■□□□ 1.51
GCH1-201ENST00000254299 GTF3C3Q9Y5Q9 886 aa24.45■■□□□ 1.51
GCH1-201ENST00000254299 EIF4G1Q04637 1599 aaKnown RBP24.44■■□□□ 1.5
GCH1-201ENST00000254299 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
GCH1-201ENST00000254299 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
GCH1-201ENST00000254299 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
GCH1-201ENST00000254299 YTHDC1Q96MU7 727 aaKnown RBP24.35■■□□□ 1.49
GCH1-201ENST00000254299 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
GCH1-201ENST00000254299 RANGAP1P46060 587 aaPredicted RBP24.31■■□□□ 1.48
GCH1-201ENST00000254299 HNRNPUL2Q1KMD3 747 aaKnown RBP24.29■■□□□ 1.48
GCH1-201ENST00000254299 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
GCH1-201ENST00000254299 CENPBP07199 599 aaPredicted RBP24.23■■□□□ 1.47
GCH1-201ENST00000254299 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
GCH1-201ENST00000254299 TNIKQ9UKE5 1360 aa24.19■■□□□ 1.46
GCH1-201ENST00000254299 ZNF316A6NFI3 1004 aaPredicted RBP24.15■■□□□ 1.46
GCH1-201ENST00000254299 PEG3Q9GZU2 1588 aa24.14■■□□□ 1.46
GCH1-201ENST00000254299 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
GCH1-201ENST00000254299 MIER1Q8N108 512 aa24.08■■□□□ 1.45
GCH1-201ENST00000254299 GOLGA3Q08378 1498 aa23.99■■□□□ 1.43
GCH1-201ENST00000254299 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
GCH1-201ENST00000254299 EEA1Q15075 1411 aa23.89■■□□□ 1.42
GCH1-201ENST00000254299 CLIP1P30622 1438 aa23.88■■□□□ 1.41
GCH1-201ENST00000254299 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
GCH1-201ENST00000254299 APLP2Q06481 763 aa23.84■■□□□ 1.41
GCH1-201ENST00000254299 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
GCH1-201ENST00000254299 CEP164Q9UPV0 1460 aa23.77■■□□□ 1.4
GCH1-201ENST00000254299 VPS8Q8N3P4 1428 aa23.71■■□□□ 1.39
GCH1-201ENST00000254299 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
GCH1-201ENST00000254299 KANK4Q5T7N3 995 aaPredicted RBP23.64■■□□□ 1.38
GCH1-201ENST00000254299 KIF21BO75037 1637 aa23.62■■□□□ 1.37
GCH1-201ENST00000254299 ITGAEP38570 1179 aa23.62■■□□□ 1.37
GCH1-201ENST00000254299 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
GCH1-201ENST00000254299 DHX57Q6P158 1386 aaKnown RBP23.5■■□□□ 1.35
GCH1-201ENST00000254299 TOP2BQ02880 1626 aa23.43■■□□□ 1.34
GCH1-201ENST00000254299 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
GCH1-201ENST00000254299 MYT1Q01538 1121 aa23.4■■□□□ 1.34
GCH1-201ENST00000254299 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
GCH1-201ENST00000254299 CFTRP13569 1480 aa23.4■■□□□ 1.34
GCH1-201ENST00000254299 SUPT16HQ9Y5B9 1047 aaKnown RBP23.35■■□□□ 1.33
GCH1-201ENST00000254299 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
GCH1-201ENST00000254299 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
GCH1-201ENST00000254299 CUX1P39880 1505 aa23.34■■□□□ 1.33
GCH1-201ENST00000254299 PRXQ9BXM0 1461 aa23.27■■□□□ 1.32
GCH1-201ENST00000254299 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
GCH1-201ENST00000254299 BCANQ96GW7 911 aa23.22■■□□□ 1.31
GCH1-201ENST00000254299 HIRIP3Q9BW71 556 aaPredicted RBP23.22■■□□□ 1.31
GCH1-201ENST00000254299 CLSPNQ9HAW4 1339 aa23.19■■□□□ 1.3
GCH1-201ENST00000254299 CCNB3Q8WWL7 1395 aa23.19■■□□□ 1.3
GCH1-201ENST00000254299 ATP1B4Q9UN42 357 aaPredicted RBP23.18■■□□□ 1.3
GCH1-201ENST00000254299 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
GCH1-201ENST00000254299 SIN3AQ96ST3 1273 aa23.17■■□□□ 1.3
GCH1-201ENST00000254299 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
GCH1-201ENST00000254299 ARHGAP35Q9NRY4 1499 aa23.14■■□□□ 1.3
GCH1-201ENST00000254299 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
GCH1-201ENST00000254299 RAB3GAP2Q9H2M9 1393 aa23.13■■□□□ 1.29
GCH1-201ENST00000254299 DDX10Q13206 875 aaKnown RBP23.13■■□□□ 1.29
GCH1-201ENST00000254299 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
GCH1-201ENST00000254299 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms