RNA–Protein interactions for RNA: ENSMUST00000221749.1

Hmgb1-ps11-201, mousemouse

BASIC

Gene Hmgb1-ps11, Length 621 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps11-201ENSMUST00000221749 Chic1Q8CBW7 227 aa28.58■■■□□ 2.17
Hmgb1-ps11-201ENSMUST00000221749 Mapk8ip2Q9ERE9 830 aa27.73■■■□□ 2.03
Hmgb1-ps11-201ENSMUST00000221749 Phf23Q8BSN5 401 aa25.7■■□□□ 1.7
Hmgb1-ps11-201ENSMUST00000221749 Plppr3Q7TPB0 716 aa24.89■■□□□ 1.58
Hmgb1-ps11-201ENSMUST00000221749 Gab3Q8BSM5 595 aa24.65■■□□□ 1.54
Hmgb1-ps11-201ENSMUST00000221749 Senp3Q9EP97 568 aaKnown RBP23.61■■□□□ 1.37
Hmgb1-ps11-201ENSMUST00000221749 Kcna4Q61423 654 aa22.76■■□□□ 1.23
Hmgb1-ps11-201ENSMUST00000221749 Trap1aP19473 224 aa20.85■□□□□ 0.93
Hmgb1-ps11-201ENSMUST00000221749 Hoxd11P23813 323 aa20.78■□□□□ 0.92
Hmgb1-ps11-201ENSMUST00000221749 Fam163aQ8CAA5 168 aa20.52■□□□□ 0.88
Hmgb1-ps11-201ENSMUST00000221749 Dmrt2Q8BG36 561 aa20.35■□□□□ 0.85
Hmgb1-ps11-201ENSMUST00000221749 Ppargc1bQ8VHJ7 1014 aa20.05■□□□□ 0.8
Hmgb1-ps11-201ENSMUST00000221749 Znf219Q6IQX8 726 aa19.94■□□□□ 0.78
Hmgb1-ps11-201ENSMUST00000221749 Chrna2Q91X60 512 aa19.73■□□□□ 0.75
Hmgb1-ps11-201ENSMUST00000221749 Slc4a1apE9PX68 744 aa19.57■□□□□ 0.72
Hmgb1-ps11-201ENSMUST00000221749 Rsph4aQ8BYM7 716 aa19.55■□□□□ 0.72
Hmgb1-ps11-201ENSMUST00000221749 Dnajc5bQ9CQ94 199 aa19.31■□□□□ 0.68
Hmgb1-ps11-201ENSMUST00000221749 Atf5O70191 283 aa19.28■□□□□ 0.68
Hmgb1-ps11-201ENSMUST00000221749 Rimbp2Q80U40 1072 aa19.28■□□□□ 0.68
Hmgb1-ps11-201ENSMUST00000221749 Ppp4r2Q0VGB7 417 aa19.13■□□□□ 0.65
Hmgb1-ps11-201ENSMUST00000221749 Hs6st3Q9QYK4 470 aa19.09■□□□□ 0.65
Hmgb1-ps11-201ENSMUST00000221749 ArsiQ32KI9 573 aa18.99■□□□□ 0.63
Hmgb1-ps11-201ENSMUST00000221749 Akt1s1Q9D1F4 257 aa18.86■□□□□ 0.61
Hmgb1-ps11-201ENSMUST00000221749 1700123L14RikQ3V2K7 440 aa18.66■□□□□ 0.58
Hmgb1-ps11-201ENSMUST00000221749 Slc34a2Q9DBP0 697 aa18.54■□□□□ 0.56
Hmgb1-ps11-201ENSMUST00000221749 Bach1P97302 739 aa18.36■□□□□ 0.53
Hmgb1-ps11-201ENSMUST00000221749 Sox12Q04890 314 aa18.2■□□□□ 0.5
Hmgb1-ps11-201ENSMUST00000221749 Fam71e1A1L3C1 212 aa18.02■□□□□ 0.48
Hmgb1-ps11-201ENSMUST00000221749 WdpcpQ8C456 722 aa17.93■□□□□ 0.46
Hmgb1-ps11-201ENSMUST00000221749 Ube2uB1AUC4 352 aa17.86■□□□□ 0.45
Hmgb1-ps11-201ENSMUST00000221749 Cdca7Q9D0M2 382 aa17.84■□□□□ 0.45
Hmgb1-ps11-201ENSMUST00000221749 Nlrp6Q91WS2 869 aa17.83■□□□□ 0.44
Hmgb1-ps11-201ENSMUST00000221749 C1qtnf12Q8R2Z0 308 aa17.73■□□□□ 0.43
Hmgb1-ps11-201ENSMUST00000221749 AcrbpQ3V140 540 aa17.5■□□□□ 0.39
Hmgb1-ps11-201ENSMUST00000221749 Pde4cQ3UEI1 686 aa17.45■□□□□ 0.38
Hmgb1-ps11-201ENSMUST00000221749 Riok3Q9DBU3 519 aaKnown RBP17.35■□□□□ 0.37
Hmgb1-ps11-201ENSMUST00000221749 Ifnlr1Q8CGK5 535 aa17.34■□□□□ 0.37
Hmgb1-ps11-201ENSMUST00000221749 G430095P16RikE9Q913 147 aa17.32■□□□□ 0.36
Hmgb1-ps11-201ENSMUST00000221749 Npm2Q80W85 207 aa17.32■□□□□ 0.36
Hmgb1-ps11-201ENSMUST00000221749 Egfem1Q8C088 590 aa17.23■□□□□ 0.35
Hmgb1-ps11-201ENSMUST00000221749 Zbtb7aO88939 569 aaKnown RBP17.22■□□□□ 0.35
Hmgb1-ps11-201ENSMUST00000221749 MyclP10166 368 aa17.22■□□□□ 0.35
Hmgb1-ps11-201ENSMUST00000221749 Prm3Q62100 101 aa17.19■□□□□ 0.34
Hmgb1-ps11-201ENSMUST00000221749 Ms4a5Q810P8 197 aa17.18■□□□□ 0.34
Hmgb1-ps11-201ENSMUST00000221749 Trim41Q5NCC3 630 aa17.17■□□□□ 0.34
Hmgb1-ps11-201ENSMUST00000221749 Grwd1Q810D6 446 aaKnown RBP17.14■□□□□ 0.33
Hmgb1-ps11-201ENSMUST00000221749 Rtn4Q99P72 1162 aaKnown RBP17.09■□□□□ 0.33
Hmgb1-ps11-201ENSMUST00000221749 Znf704Q9ERQ3 566 aa17.08■□□□□ 0.32
Hmgb1-ps11-201ENSMUST00000221749 Slc4a5E9Q3M5 1116 aa17■□□□□ 0.31
Hmgb1-ps11-201ENSMUST00000221749 Zbtb12Q9Z150 459 aa16.97■□□□□ 0.31
Hmgb1-ps11-201ENSMUST00000221749 Tshz2Q68FE9 1030 aa16.92■□□□□ 0.3
Hmgb1-ps11-201ENSMUST00000221749 Rnf216P58283 853 aa16.91■□□□□ 0.3
Hmgb1-ps11-201ENSMUST00000221749 Styxl1Q9DAR2 321 aa16.9■□□□□ 0.3
Hmgb1-ps11-201ENSMUST00000221749 Abcb7Q61102 752 aaKnown RBP16.85■□□□□ 0.29
Hmgb1-ps11-201ENSMUST00000221749 Gtpbp6Q3U6U5 514 aa16.81■□□□□ 0.28
Hmgb1-ps11-201ENSMUST00000221749 Nkx1-1G3UXB3 402 aa16.61■□□□□ 0.25
Hmgb1-ps11-201ENSMUST00000221749 Fbln2P37889 1221 aa16.57■□□□□ 0.24
Hmgb1-ps11-201ENSMUST00000221749 Npm3Q9CPP0 175 aaKnown RBP16.44■□□□□ 0.22
Hmgb1-ps11-201ENSMUST00000221749 Ehmt2Q9Z148 1263 aaKnown RBP16.43■□□□□ 0.22
Hmgb1-ps11-201ENSMUST00000221749 MpndQ3TV65 487 aa16.42■□□□□ 0.22
Hmgb1-ps11-201ENSMUST00000221749 Skida1Q80YR3 822 aa16.25■□□□□ 0.19
Hmgb1-ps11-201ENSMUST00000221749 Tcf3P15806 651 aa16.23■□□□□ 0.19
Hmgb1-ps11-201ENSMUST00000221749 GapdhsQ64467 440 aa16.22■□□□□ 0.19
Hmgb1-ps11-201ENSMUST00000221749 Ecm2Q5FW85 670 aa16.09■□□□□ 0.17
Hmgb1-ps11-201ENSMUST00000221749 Ppp1r37Q8BKR5 712 aa16.08■□□□□ 0.16
Hmgb1-ps11-201ENSMUST00000221749 Kcnn1Q9EQR3 537 aa15.92■□□□□ 0.14
Hmgb1-ps11-201ENSMUST00000221749 Pitpnm1O35954 1243 aa15.9■□□□□ 0.14
Hmgb1-ps11-201ENSMUST00000221749 Lrrc43Q3V0L5 667 aa15.86■□□□□ 0.13
Hmgb1-ps11-201ENSMUST00000221749 Znf703P0CL69 594 aa15.85■□□□□ 0.13
Hmgb1-ps11-201ENSMUST00000221749 Prr29B1ARI9 187 aa15.83■□□□□ 0.12
Hmgb1-ps11-201ENSMUST00000221749 Ildr2B5TVM2 661 aa15.82■□□□□ 0.12
Hmgb1-ps11-201ENSMUST00000221749 Jarid2Q62315 1234 aa15.78■□□□□ 0.12
Hmgb1-ps11-201ENSMUST00000221749 Trim35Q8C006 501 aa15.77■□□□□ 0.12
Hmgb1-ps11-201ENSMUST00000221749 Prdm10Q3UTQ7 1184 aa15.73■□□□□ 0.11
Hmgb1-ps11-201ENSMUST00000221749 Kank3Q9Z1P7 791 aa15.68■□□□□ 0.1
Hmgb1-ps11-201ENSMUST00000221749 Cadps2Q8BYR5 1297 aa15.65■□□□□ 0.1
Hmgb1-ps11-201ENSMUST00000221749 Clcn6O35454 870 aa15.64■□□□□ 0.09
Hmgb1-ps11-201ENSMUST00000221749 Pip4p2Q9CZX7 257 aa15.62■□□□□ 0.09
Hmgb1-ps11-201ENSMUST00000221749 Nyap1Q6PFX7 833 aa15.57■□□□□ 0.08
Hmgb1-ps11-201ENSMUST00000221749 Cacnb1Q8R3Z5 597 aa15.56■□□□□ 0.08
Hmgb1-ps11-201ENSMUST00000221749 MycnP03966 462 aaKnown RBP15.47■□□□□ 0.07
Hmgb1-ps11-201ENSMUST00000221749 Hnrnpul2Q00PI9 745 aaKnown RBP15.47■□□□□ 0.07
Hmgb1-ps11-201ENSMUST00000221749 Sra1Q80VJ2 232 aa15.44■□□□□ 0.06
Hmgb1-ps11-201ENSMUST00000221749 Spock2Q9ER58 423 aa15.34■□□□□ 0.05
Hmgb1-ps11-201ENSMUST00000221749 Hdac5Q9Z2V6 1113 aa15.31■□□□□ 0.04
Hmgb1-ps11-201ENSMUST00000221749 Ppp6r1Q7TSI3 856 aa15.29■□□□□ 0.04
Hmgb1-ps11-201ENSMUST00000221749 SnphQ80U23 495 aa15.29■□□□□ 0.04
Hmgb1-ps11-201ENSMUST00000221749 Pde4dQ01063 747 aa15.25■□□□□ 0.03
Hmgb1-ps11-201ENSMUST00000221749 Repin1Q5U4E2 545 aa15.24■□□□□ 0.03
Hmgb1-ps11-201ENSMUST00000221749 Fam117bQ3U3E2 584 aa15.22■□□□□ 0.03
Hmgb1-ps11-201ENSMUST00000221749 CatipB9EKE5 520 aa15.18■□□□□ 0.02
Hmgb1-ps11-201ENSMUST00000221749 Dok7Q18PE0 504 aa15.17■□□□□ 0.02
Hmgb1-ps11-201ENSMUST00000221749 Zbtb7bQ64321 544 aa15.13■□□□□ 0.01
Hmgb1-ps11-201ENSMUST00000221749 Gm13697A2AK42 830 aa15.09■□□□□ 0.01
Hmgb1-ps11-201ENSMUST00000221749 Ferd3lQ923Z4 168 aa15.09■□□□□ 0.01
Hmgb1-ps11-201ENSMUST00000221749 PygbQ8CI94 843 aaKnown RBP15.06■□□□□ 0
Hmgb1-ps11-201ENSMUST00000221749 Atad2Q8CDM1 1040 aa15.02■□□□□ -0
Hmgb1-ps11-201ENSMUST00000221749 Pdap1Q3UHX2 181 aaKnown RBP15.01□□□□□ -0.01
Hmgb1-ps11-201ENSMUST00000221749 Zbtb22Q9Z0G7 638 aa15.01□□□□□ -0.01
Hmgb1-ps11-201ENSMUST00000221749 CrebzfQ91ZR3 358 aa14.97□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms