RNA–Protein interactions for RNA: ENSMUST00000210833.1

Ptpre-205, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 2,209 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-205ENSMUST00000210833 NischQ80TM9 1593 aa20.19■□□□□ 0.82
Ptpre-205ENSMUST00000210833 Gm35339A0A140LHH9 1649 aa19.87■□□□□ 0.77
Ptpre-205ENSMUST00000210833 Abcc9P70170 1546 aa19.65■□□□□ 0.74
Ptpre-205ENSMUST00000210833 Abcc8B2RUS7 1588 aa19.14■□□□□ 0.65
Ptpre-205ENSMUST00000210833 Rtl1Q7M732 1744 aa18.88■□□□□ 0.61
Ptpre-205ENSMUST00000210833 Rhox8Q6VSS7 320 aa18.74■□□□□ 0.59
Ptpre-205ENSMUST00000210833 Ccdc180J3QNE4 1664 aa18.5■□□□□ 0.55
Ptpre-205ENSMUST00000210833 Zcchc6Q5BLK4 1491 aaKnown RBP18.03■□□□□ 0.48
Ptpre-205ENSMUST00000210833 Dcaf1Q80TR8 1506 aa17.96■□□□□ 0.47
Ptpre-205ENSMUST00000210833 ScribQ80U72 1612 aa17.75■□□□□ 0.43
Ptpre-205ENSMUST00000210833 Rpgrip1Q9EPQ2 1331 aa17.72■□□□□ 0.43
Ptpre-205ENSMUST00000210833 Rb1cc1Q9ESK9 1588 aa17.72■□□□□ 0.43
Ptpre-205ENSMUST00000210833 Baz1aO88379 1555 aa17.53■□□□□ 0.4
Ptpre-205ENSMUST00000210833 HrcG5E8J6 738 aa17.52■□□□□ 0.4
Ptpre-205ENSMUST00000210833 Kdm5dQ62240 1548 aa17.46■□□□□ 0.39
Ptpre-205ENSMUST00000210833 Acin1Q9JIX8 1338 aaKnown RBP17.33■□□□□ 0.36
Ptpre-205ENSMUST00000210833 NacadQ5SWP3 1504 aa17.32■□□□□ 0.36
Ptpre-205ENSMUST00000210833 Ccdc136Q3TVA9 1136 aa17.32■□□□□ 0.36
Ptpre-205ENSMUST00000210833 Crybg2B7ZCC2 1516 aa17.2■□□□□ 0.34
Ptpre-205ENSMUST00000210833 Smarca2Q6DIC0 1577 aa17.15■□□□□ 0.34
Ptpre-205ENSMUST00000210833 Trim41Q5NCC3 630 aa17.06■□□□□ 0.32
Ptpre-205ENSMUST00000210833 Ehmt2Q9Z148 1263 aaKnown RBP17.01■□□□□ 0.31
Ptpre-205ENSMUST00000210833 Cep164Q5DU05 1446 aa16.98■□□□□ 0.31
Ptpre-205ENSMUST00000210833 Sycp2Q9CUU3 1500 aa16.93■□□□□ 0.3
Ptpre-205ENSMUST00000210833 Brd4Q9ESU6 1400 aaKnown RBP16.74■□□□□ 0.27
Ptpre-205ENSMUST00000210833 Rsf1E9PWW9 1441 aaKnown RBP16.64■□□□□ 0.25
Ptpre-205ENSMUST00000210833 Golga3P55937 1487 aa16.6■□□□□ 0.25
Ptpre-205ENSMUST00000210833 Cngb1E1AZ71 1325 aa16.6■□□□□ 0.25
Ptpre-205ENSMUST00000210833 Pcgf6Q99NA9 353 aa16.6■□□□□ 0.25
Ptpre-205ENSMUST00000210833 Cecr2E9Q2Z1 1453 aa16.6■□□□□ 0.25
Ptpre-205ENSMUST00000210833 Synj1Q8CHC4 1574 aa16.56■□□□□ 0.24
Ptpre-205ENSMUST00000210833 Chic1Q8CBW7 227 aa16.55■□□□□ 0.24
Ptpre-205ENSMUST00000210833 BicraF8VPZ9 1578 aa16.52■□□□□ 0.24
Ptpre-205ENSMUST00000210833 Ccdc88bQ4QRL3 1481 aa16.5■□□□□ 0.23
Ptpre-205ENSMUST00000210833 Gab3Q8BSM5 595 aa16.43■□□□□ 0.22
Ptpre-205ENSMUST00000210833 CftrP26361 1476 aa16.43■□□□□ 0.22
Ptpre-205ENSMUST00000210833 Top2bQ64511 1612 aa16.42■□□□□ 0.22
Ptpre-205ENSMUST00000210833 Cttnbp2B9EJA2 1648 aa16.4■□□□□ 0.22
Ptpre-205ENSMUST00000210833 Supt5hO55201 1082 aaKnown RBP16.3■□□□□ 0.2
Ptpre-205ENSMUST00000210833 NefmP08553 848 aa16.29■□□□□ 0.2
Ptpre-205ENSMUST00000210833 Esf1Q3V1V3 845 aaKnown RBP16.29■□□□□ 0.2
Ptpre-205ENSMUST00000210833 Smarca4Q3TKT4 1613 aaKnown RBP16.26■□□□□ 0.19
Ptpre-205ENSMUST00000210833 Cc2d2aQ8CFW7 1633 aa16.24■□□□□ 0.19
Ptpre-205ENSMUST00000210833 Mier1Q5UAK0 511 aa16.19■□□□□ 0.18
Ptpre-205ENSMUST00000210833 Rapgef2Q8CHG7 1496 aa16.16■□□□□ 0.18
Ptpre-205ENSMUST00000210833 Fmn1Q05860 1466 aa16.15■□□□□ 0.18
Ptpre-205ENSMUST00000210833 Top2aQ01320 1528 aaKnown RBP16.11■□□□□ 0.17
Ptpre-205ENSMUST00000210833 Zeb1Q64318 1117 aa16.08■□□□□ 0.16
Ptpre-205ENSMUST00000210833 Iqgap2Q3UQ44 1575 aa16.01■□□□□ 0.15
Ptpre-205ENSMUST00000210833 Pds5bQ4VA53 1446 aaKnown RBP16■□□□□ 0.15
Ptpre-205ENSMUST00000210833 Cep162Q6ZQ06 1403 aa15.99■□□□□ 0.15
Ptpre-205ENSMUST00000210833 UbtfP25976 765 aaKnown RBP15.9■□□□□ 0.14
Ptpre-205ENSMUST00000210833 Neurod1Q60867 357 aa15.9■□□□□ 0.14
Ptpre-205ENSMUST00000210833 Eif4g1Q6NZJ6 1600 aaKnown RBP15.89■□□□□ 0.13
Ptpre-205ENSMUST00000210833 Atad2bE9Q166 1460 aaKnown RBP15.89■□□□□ 0.13
Ptpre-205ENSMUST00000210833 Sall2Q9QX96 1004 aa15.88■□□□□ 0.13
Ptpre-205ENSMUST00000210833 Dnajc5bQ9CQ94 199 aa15.87■□□□□ 0.13
Ptpre-205ENSMUST00000210833 TnnQ80Z71 1560 aa15.86■□□□□ 0.13
Ptpre-205ENSMUST00000210833 Thoc2B1AZI6 1594 aaKnown RBP15.85■□□□□ 0.13
Ptpre-205ENSMUST00000210833 Las1lA2BE28 776 aaKnown RBP15.83■□□□□ 0.12
Ptpre-205ENSMUST00000210833 Myt1lP97500 1187 aa15.82■□□□□ 0.12
Ptpre-205ENSMUST00000210833 Npm2Q80W85 207 aa15.8■□□□□ 0.12
Ptpre-205ENSMUST00000210833 Clip1Q922J3 1391 aa15.76■□□□□ 0.11
Ptpre-205ENSMUST00000210833 Wdr66E9Q743 1299 aa15.69■□□□□ 0.1
Ptpre-205ENSMUST00000210833 Ncapd3Q6ZQK0 1506 aa15.68■□□□□ 0.1
Ptpre-205ENSMUST00000210833 Arhgap35Q91YM2 1499 aa15.68■□□□□ 0.1
Ptpre-205ENSMUST00000210833 NrkQ9R0G8 1455 aa15.68■□□□□ 0.1
Ptpre-205ENSMUST00000210833 ClspnQ80YR7 1315 aa15.68■□□□□ 0.1
Ptpre-205ENSMUST00000210833 Lamc3Q9R0B6 1581 aa15.67■□□□□ 0.1
Ptpre-205ENSMUST00000210833 Aebp2Q9Z248 504 aaKnown RBP15.66■□□□□ 0.1
Ptpre-205ENSMUST00000210833 Ercc6F8VPZ5 1481 aa15.65■□□□□ 0.1
Ptpre-205ENSMUST00000210833 Wdr62Q3U3T8 1523 aa15.65■□□□□ 0.1
Ptpre-205ENSMUST00000210833 TonslQ6NZL6 1363 aa15.64■□□□□ 0.09
Ptpre-205ENSMUST00000210833 Frmpd1A2AKB4 1549 aa15.63■□□□□ 0.09
Ptpre-205ENSMUST00000210833 Anks4bQ8K3X6 423 aa15.63■□□□□ 0.09
Ptpre-205ENSMUST00000210833 Plekhg3Q4VAC9 1341 aa15.62■□□□□ 0.09
Ptpre-205ENSMUST00000210833 Eea1Q8BL66 1411 aa15.6■□□□□ 0.09
Ptpre-205ENSMUST00000210833 PtprkP35822 1457 aa15.59■□□□□ 0.09
Ptpre-205ENSMUST00000210833 Map3k1P53349 1493 aa15.59■□□□□ 0.09
Ptpre-205ENSMUST00000210833 Ccdc18Q640L5 1455 aa15.58■□□□□ 0.09
Ptpre-205ENSMUST00000210833 Shroom4Q1W617 1475 aa15.58■□□□□ 0.08
Ptpre-205ENSMUST00000210833 Arap1Q4LDD4 1452 aa15.57■□□□□ 0.08
Ptpre-205ENSMUST00000210833 Camsap1A2AHC3 1581 aa15.55■□□□□ 0.08
Ptpre-205ENSMUST00000210833 Arhgef5E9Q7D5 1581 aa15.55■□□□□ 0.08
Ptpre-205ENSMUST00000210833 Unc13aQ4KUS2 1712 aa15.52■□□□□ 0.07
Ptpre-205ENSMUST00000210833 Cdk11bP24788 784 aaKnown RBP15.52■□□□□ 0.07
Ptpre-205ENSMUST00000210833 Kif15Q6P9L6 1387 aa15.52■□□□□ 0.07
Ptpre-205ENSMUST00000210833 Fam135aQ6NS59 1506 aa15.51■□□□□ 0.07
Ptpre-205ENSMUST00000210833 Nop58Q6DFW4 536 aaKnown RBP15.5■□□□□ 0.07
Ptpre-205ENSMUST00000210833 Setd5Q5XJV7 1441 aa15.49■□□□□ 0.07
Ptpre-205ENSMUST00000210833 Erich3F6QRE9 1637 aa15.47■□□□□ 0.07
Ptpre-205ENSMUST00000210833 Tiam1Q60610 1591 aa15.47■□□□□ 0.07
Ptpre-205ENSMUST00000210833 Kdm5bQ80Y84 1544 aa15.47■□□□□ 0.07
Ptpre-205ENSMUST00000210833 TchhA0A0B4J1F9 1599 aa15.44■□□□□ 0.06
Ptpre-205ENSMUST00000210833 Grin2bQ01097 1482 aa15.44■□□□□ 0.06
Ptpre-205ENSMUST00000210833 Il27Q8K3I6 234 aa15.43■□□□□ 0.06
Ptpre-205ENSMUST00000210833 Mroh2bQ7M6Y6 1581 aa15.42■□□□□ 0.06
Ptpre-205ENSMUST00000210833 AqrQ8CFQ3 1481 aaKnown RBP15.41■□□□□ 0.06
Ptpre-205ENSMUST00000210833 Phldb1Q6PDH0 1371 aaKnown RBP15.4■□□□□ 0.06
Ptpre-205ENSMUST00000210833 Ankrd26Q811D2 1581 aa15.39■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms