RNA–Protein interactions for RNA: ENSMUST00000210309.1

Usp47-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp47, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-202ENSMUST00000210309 Rhox8Q6VSS7 320 aa10.8□□□□□ -0.68
Usp47-202ENSMUST00000210309 NischQ80TM9 1593 aa10.57□□□□□ -0.72
Usp47-202ENSMUST00000210309 Abcc9P70170 1546 aa10.07□□□□□ -0.8
Usp47-202ENSMUST00000210309 Abcc8B2RUS7 1588 aa9.96□□□□□ -0.82
Usp47-202ENSMUST00000210309 Ccdc136Q3TVA9 1136 aa9.87□□□□□ -0.83
Usp47-202ENSMUST00000210309 Gm35339A0A140LHH9 1649 aa9.69□□□□□ -0.86
Usp47-202ENSMUST00000210309 Ehmt2Q9Z148 1263 aaKnown RBP9.6□□□□□ -0.87
Usp47-202ENSMUST00000210309 Trim41Q5NCC3 630 aa9.59□□□□□ -0.87
Usp47-202ENSMUST00000210309 Esf1Q3V1V3 845 aaKnown RBP9.47□□□□□ -0.89
Usp47-202ENSMUST00000210309 Zcchc6Q5BLK4 1491 aaKnown RBP9.41□□□□□ -0.9
Usp47-202ENSMUST00000210309 Cngb1E1AZ71 1325 aa9.4□□□□□ -0.9
Usp47-202ENSMUST00000210309 Ube2uB1AUC4 352 aa9.38□□□□□ -0.91
Usp47-202ENSMUST00000210309 Gab3Q8BSM5 595 aa9.36□□□□□ -0.91
Usp47-202ENSMUST00000210309 HrcG5E8J6 738 aa9.36□□□□□ -0.91
Usp47-202ENSMUST00000210309 Wdr66E9Q743 1299 aa9.31□□□□□ -0.92
Usp47-202ENSMUST00000210309 Rpgrip1Q9EPQ2 1331 aa9.31□□□□□ -0.92
Usp47-202ENSMUST00000210309 NacadQ5SWP3 1504 aa9.22□□□□□ -0.93
Usp47-202ENSMUST00000210309 Zeb1Q64318 1117 aa9.2□□□□□ -0.94
Usp47-202ENSMUST00000210309 Dcaf1Q80TR8 1506 aa9.18□□□□□ -0.94
Usp47-202ENSMUST00000210309 Rb1cc1Q9ESK9 1588 aa9.17□□□□□ -0.94
Usp47-202ENSMUST00000210309 Kdm5dQ62240 1548 aa9.14□□□□□ -0.95
Usp47-202ENSMUST00000210309 ScribQ80U72 1612 aa9.13□□□□□ -0.95
Usp47-202ENSMUST00000210309 Las1lA2BE28 776 aaKnown RBP9.12□□□□□ -0.95
Usp47-202ENSMUST00000210309 Ccdc180J3QNE4 1664 aa9.12□□□□□ -0.95
Usp47-202ENSMUST00000210309 Myt1lP97500 1187 aa9.1□□□□□ -0.95
Usp47-202ENSMUST00000210309 Il27Q8K3I6 234 aa9.08□□□□□ -0.96
Usp47-202ENSMUST00000210309 Pelp1Q9DBD5 1123 aaKnown RBP9.08□□□□□ -0.96
Usp47-202ENSMUST00000210309 Npm2Q80W85 207 aa9.08□□□□□ -0.96
Usp47-202ENSMUST00000210309 Baz1aO88379 1555 aa9.07□□□□□ -0.96
Usp47-202ENSMUST00000210309 Chic1Q8CBW7 227 aa9.07□□□□□ -0.96
Usp47-202ENSMUST00000210309 Amer1Q7TS75 1132 aa9.04□□□□□ -0.96
Usp47-202ENSMUST00000210309 Brd4Q9ESU6 1400 aaKnown RBP9.03□□□□□ -0.96
Usp47-202ENSMUST00000210309 Rtl1Q7M732 1744 aa8.98□□□□□ -0.97
Usp47-202ENSMUST00000210309 Slc24a1Q91WD8 1130 aa8.95□□□□□ -0.98
Usp47-202ENSMUST00000210309 Sycp2Q9CUU3 1500 aa8.94□□□□□ -0.98
Usp47-202ENSMUST00000210309 Acin1Q9JIX8 1338 aaKnown RBP8.92□□□□□ -0.98
Usp47-202ENSMUST00000210309 Crybg2B7ZCC2 1516 aa8.9□□□□□ -0.98
Usp47-202ENSMUST00000210309 Cep164Q5DU05 1446 aa8.89□□□□□ -0.99
Usp47-202ENSMUST00000210309 UbtfP25976 765 aaKnown RBP8.88□□□□□ -0.99
Usp47-202ENSMUST00000210309 Cecr2E9Q2Z1 1453 aa8.86□□□□□ -0.99
Usp47-202ENSMUST00000210309 Npm1Q61937 292 aaKnown RBP8.84□□□□□ -0.99
Usp47-202ENSMUST00000210309 Rsf1E9PWW9 1441 aaKnown RBP8.84□□□□□ -0.99
Usp47-202ENSMUST00000210309 Golga3P55937 1487 aa8.83□□□□□ -1
Usp47-202ENSMUST00000210309 Ubl4bQ9CQ84 188 aa8.78□□□□□ -1
Usp47-202ENSMUST00000210309 CftrP26361 1476 aa8.77□□□□□ -1
Usp47-202ENSMUST00000210309 Ccdc88bQ4QRL3 1481 aa8.77□□□□□ -1.01
Usp47-202ENSMUST00000210309 Ttbk1Q6PCN3 1308 aa8.76□□□□□ -1.01
Usp47-202ENSMUST00000210309 Smarca2Q6DIC0 1577 aa8.76□□□□□ -1.01
Usp47-202ENSMUST00000210309 NefmP08553 848 aa8.74□□□□□ -1.01
Usp47-202ENSMUST00000210309 Plekhg3Q4VAC9 1341 aa8.72□□□□□ -1.01
Usp47-202ENSMUST00000210309 Ap3b1Q9Z1T1 1105 aa8.7□□□□□ -1.02
Usp47-202ENSMUST00000210309 Pds5bQ4VA53 1446 aaKnown RBP8.69□□□□□ -1.02
Usp47-202ENSMUST00000210309 Kif15Q6P9L6 1387 aa8.69□□□□□ -1.02
Usp47-202ENSMUST00000210309 Stra8P70278 393 aa8.67□□□□□ -1.02
Usp47-202ENSMUST00000210309 Neurod1Q60867 357 aa8.67□□□□□ -1.02
Usp47-202ENSMUST00000210309 Atad2bE9Q166 1460 aaKnown RBP8.67□□□□□ -1.02
Usp47-202ENSMUST00000210309 Mier1Q5UAK0 511 aa8.67□□□□□ -1.02
Usp47-202ENSMUST00000210309 CenpbP27790 599 aa8.65□□□□□ -1.02
Usp47-202ENSMUST00000210309 Lmod2Q3UHZ5 550 aa8.65□□□□□ -1.02
Usp47-202ENSMUST00000210309 Clip1Q922J3 1391 aa8.64□□□□□ -1.03
Usp47-202ENSMUST00000210309 Fam50aQ9WV03 339 aaKnown RBP8.63□□□□□ -1.03
Usp47-202ENSMUST00000210309 4930567H17RikQ3V0K5 233 aa8.61□□□□□ -1.03
Usp47-202ENSMUST00000210309 Os9Q8K2C7 672 aa8.61□□□□□ -1.03
Usp47-202ENSMUST00000210309 Ppargc1bQ8VHJ7 1014 aa8.61□□□□□ -1.03
Usp47-202ENSMUST00000210309 BicraF8VPZ9 1578 aa8.59□□□□□ -1.03
Usp47-202ENSMUST00000210309 4933416C03RikQ3V063 378 aa8.58□□□□□ -1.04
Usp47-202ENSMUST00000210309 Pcgf6Q99NA9 353 aa8.58□□□□□ -1.04
Usp47-202ENSMUST00000210309 Eif5bQ05D44 1216 aaKnown RBP8.57□□□□□ -1.04
Usp47-202ENSMUST00000210309 Eid3Q3V124 375 aa8.56□□□□□ -1.04
Usp47-202ENSMUST00000210309 Synj1Q8CHC4 1574 aa8.56□□□□□ -1.04
Usp47-202ENSMUST00000210309 Setd5Q5XJV7 1441 aa8.54□□□□□ -1.04
Usp47-202ENSMUST00000210309 Fmn1Q05860 1466 aa8.54□□□□□ -1.04
Usp47-202ENSMUST00000210309 Anp32bQ9EST5 272 aaKnown RBP8.53□□□□□ -1.04
Usp47-202ENSMUST00000210309 Cep162Q6ZQ06 1403 aa8.52□□□□□ -1.05
Usp47-202ENSMUST00000210309 Phldb1Q6PDH0 1371 aaKnown RBP8.51□□□□□ -1.05
Usp47-202ENSMUST00000210309 Zbtb7cQ8VCZ7 619 aa8.51□□□□□ -1.05
Usp47-202ENSMUST00000210309 Ercc6F8VPZ5 1481 aa8.51□□□□□ -1.05
Usp47-202ENSMUST00000210309 Smarca4Q3TKT4 1613 aaKnown RBP8.5□□□□□ -1.05
Usp47-202ENSMUST00000210309 Supt5hO55201 1082 aaKnown RBP8.5□□□□□ -1.05
Usp47-202ENSMUST00000210309 Cux2P70298 1426 aa8.49□□□□□ -1.05
Usp47-202ENSMUST00000210309 NrdcQ8BHG1 1161 aa8.49□□□□□ -1.05
Usp47-202ENSMUST00000210309 BlmO88700 1416 aa8.47□□□□□ -1.05
Usp47-202ENSMUST00000210309 Ccdc18Q640L5 1455 aa8.47□□□□□ -1.05
Usp47-202ENSMUST00000210309 Eea1Q8BL66 1411 aa8.45□□□□□ -1.06
Usp47-202ENSMUST00000210309 LrpprcQ6PB66 1392 aaKnown RBP8.44□□□□□ -1.06
Usp47-202ENSMUST00000210309 NclP09405 707 aaKnown RBP8.44□□□□□ -1.06
Usp47-202ENSMUST00000210309 Fkbp15Q6P9Q6 1216 aaKnown RBP8.44□□□□□ -1.06
Usp47-202ENSMUST00000210309 Ifnlr1Q8CGK5 535 aa8.43□□□□□ -1.06
Usp47-202ENSMUST00000210309 NeflP08551 543 aa8.43□□□□□ -1.06
Usp47-202ENSMUST00000210309 Rapgef2Q8CHG7 1496 aa8.42□□□□□ -1.06
Usp47-202ENSMUST00000210309 Iqgap2Q3UQ44 1575 aa8.42□□□□□ -1.06
Usp47-202ENSMUST00000210309 TonslQ6NZL6 1363 aa8.42□□□□□ -1.06
Usp47-202ENSMUST00000210309 Dnajc5bQ9CQ94 199 aa8.41□□□□□ -1.06
Usp47-202ENSMUST00000210309 Sall2Q9QX96 1004 aa8.4□□□□□ -1.06
Usp47-202ENSMUST00000210309 Zbtb4Q5F293 982 aa8.4□□□□□ -1.06
Usp47-202ENSMUST00000210309 Cdk11bP24788 784 aaKnown RBP8.4□□□□□ -1.06
Usp47-202ENSMUST00000210309 Plppr3Q7TPB0 716 aa8.4□□□□□ -1.06
Usp47-202ENSMUST00000210309 Dhx29Q6PGC1 1365 aaKnown RBP8.39□□□□□ -1.07
Usp47-202ENSMUST00000210309 Gm13697A2AK42 830 aa8.38□□□□□ -1.07
Usp47-202ENSMUST00000210309 Cttnbp2B9EJA2 1648 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 6.8 ms