RNA–Protein interactions for RNA: ENSMUST00000209256.1

Ptpre-202, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-202ENSMUST00000209256 NischQ80TM9 1593 aa39.59■■■■□ 3.93
Ptpre-202ENSMUST00000209256 Gm35339A0A140LHH9 1649 aa39.25■■■■□ 3.87
Ptpre-202ENSMUST00000209256 Abcc9P70170 1546 aa38.35■■■■□ 3.73
Ptpre-202ENSMUST00000209256 Abcc8B2RUS7 1588 aa37.81■■■■□ 3.64
Ptpre-202ENSMUST00000209256 Rhox8Q6VSS7 320 aa35.94■■■■□ 3.34
Ptpre-202ENSMUST00000209256 ScribQ80U72 1612 aa35.73■■■■□ 3.31
Ptpre-202ENSMUST00000209256 Rpgrip1Q9EPQ2 1331 aa35.65■■■■□ 3.3
Ptpre-202ENSMUST00000209256 Rtl1Q7M732 1744 aa35.53■■■■□ 3.28
Ptpre-202ENSMUST00000209256 Ccdc180J3QNE4 1664 aa35.22■■■■□ 3.23
Ptpre-202ENSMUST00000209256 Dcaf1Q80TR8 1506 aa34.99■■■■□ 3.19
Ptpre-202ENSMUST00000209256 Kdm5dQ62240 1548 aa34.86■■■■□ 3.17
Ptpre-202ENSMUST00000209256 Acin1Q9JIX8 1338 aaKnown RBP34.66■■■■□ 3.14
Ptpre-202ENSMUST00000209256 NacadQ5SWP3 1504 aa34.64■■■■□ 3.14
Ptpre-202ENSMUST00000209256 Rb1cc1Q9ESK9 1588 aa34.63■■■■□ 3.13
Ptpre-202ENSMUST00000209256 Baz1aO88379 1555 aa34.15■■■■□ 3.06
Ptpre-202ENSMUST00000209256 Zcchc6Q5BLK4 1491 aaKnown RBP34.1■■■■□ 3.05
Ptpre-202ENSMUST00000209256 Pcgf6Q99NA9 353 aa34.03■■■■□ 3.04
Ptpre-202ENSMUST00000209256 Ehmt2Q9Z148 1263 aaKnown RBP33.98■■■■□ 3.03
Ptpre-202ENSMUST00000209256 Sycp2Q9CUU3 1500 aa33.94■■■■□ 3.02
Ptpre-202ENSMUST00000209256 Crybg2B7ZCC2 1516 aa33.61■■■□□ 2.97
Ptpre-202ENSMUST00000209256 Ccdc136Q3TVA9 1136 aa33.48■■■□□ 2.95
Ptpre-202ENSMUST00000209256 HrcG5E8J6 738 aa33.46■■■□□ 2.95
Ptpre-202ENSMUST00000209256 BicraF8VPZ9 1578 aa33.34■■■□□ 2.93
Ptpre-202ENSMUST00000209256 Smarca2Q6DIC0 1577 aa33.31■■■□□ 2.92
Ptpre-202ENSMUST00000209256 Trim41Q5NCC3 630 aa33.12■■■□□ 2.89
Ptpre-202ENSMUST00000209256 Supt5hO55201 1082 aaKnown RBP33.11■■■□□ 2.89
Ptpre-202ENSMUST00000209256 Cecr2E9Q2Z1 1453 aa32.86■■■□□ 2.85
Ptpre-202ENSMUST00000209256 Neurod1Q60867 357 aa32.82■■■□□ 2.84
Ptpre-202ENSMUST00000209256 Brd4Q9ESU6 1400 aaKnown RBP32.45■■■□□ 2.78
Ptpre-202ENSMUST00000209256 Synj1Q8CHC4 1574 aa32.37■■■□□ 2.77
Ptpre-202ENSMUST00000209256 Las1lA2BE28 776 aaKnown RBP32.34■■■□□ 2.77
Ptpre-202ENSMUST00000209256 Smarca4Q3TKT4 1613 aaKnown RBP32.29■■■□□ 2.76
Ptpre-202ENSMUST00000209256 CftrP26361 1476 aa32.21■■■□□ 2.75
Ptpre-202ENSMUST00000209256 Zeb1Q64318 1117 aa32.16■■■□□ 2.74
Ptpre-202ENSMUST00000209256 Cep164Q5DU05 1446 aa32.1■■■□□ 2.73
Ptpre-202ENSMUST00000209256 Cngb1E1AZ71 1325 aa32.07■■■□□ 2.72
Ptpre-202ENSMUST00000209256 Cttnbp2B9EJA2 1648 aa32.06■■■□□ 2.72
Ptpre-202ENSMUST00000209256 Esf1Q3V1V3 845 aaKnown RBP32■■■□□ 2.71
Ptpre-202ENSMUST00000209256 Atad2bE9Q166 1460 aaKnown RBP31.97■■■□□ 2.71
Ptpre-202ENSMUST00000209256 1700123L14RikQ3V2K7 440 aa31.97■■■□□ 2.71
Ptpre-202ENSMUST00000209256 Iqgap2Q3UQ44 1575 aa31.97■■■□□ 2.71
Ptpre-202ENSMUST00000209256 Pds5bQ4VA53 1446 aaKnown RBP31.96■■■□□ 2.71
Ptpre-202ENSMUST00000209256 Sall2Q9QX96 1004 aa31.91■■■□□ 2.7
Ptpre-202ENSMUST00000209256 NefmP08553 848 aa31.89■■■□□ 2.7
Ptpre-202ENSMUST00000209256 Golga3P55937 1487 aa31.87■■■□□ 2.69
Ptpre-202ENSMUST00000209256 Anks4bQ8K3X6 423 aa31.84■■■□□ 2.69
Ptpre-202ENSMUST00000209256 Csrnp3P59055 597 aa31.76■■■□□ 2.67
Ptpre-202ENSMUST00000209256 Mier1Q5UAK0 511 aa31.68■■■□□ 2.66
Ptpre-202ENSMUST00000209256 Chic1Q8CBW7 227 aa31.67■■■□□ 2.66
Ptpre-202ENSMUST00000209256 Rsf1E9PWW9 1441 aaKnown RBP31.64■■■□□ 2.66
Ptpre-202ENSMUST00000209256 Top2bQ64511 1612 aa31.62■■■□□ 2.65
Ptpre-202ENSMUST00000209256 Ccdc88bQ4QRL3 1481 aa31.59■■■□□ 2.65
Ptpre-202ENSMUST00000209256 Frmpd1A2AKB4 1549 aa31.47■■■□□ 2.63
Ptpre-202ENSMUST00000209256 Cc2d2aQ8CFW7 1633 aa31.43■■■□□ 2.62
Ptpre-202ENSMUST00000209256 Wdr62Q3U3T8 1523 aa31.43■■■□□ 2.62
Ptpre-202ENSMUST00000209256 CenpbP27790 599 aa31.42■■■□□ 2.62
Ptpre-202ENSMUST00000209256 Gab3Q8BSM5 595 aa31.39■■■□□ 2.62
Ptpre-202ENSMUST00000209256 Myt1Q8CFC2 1127 aa31.39■■■□□ 2.62
Ptpre-202ENSMUST00000209256 Ercc6F8VPZ5 1481 aa31.38■■■□□ 2.61
Ptpre-202ENSMUST00000209256 Aplp2Q06335 707 aa31.31■■■□□ 2.6
Ptpre-202ENSMUST00000209256 Thoc2B1AZI6 1594 aaKnown RBP31.19■■■□□ 2.58
Ptpre-202ENSMUST00000209256 Cdk11bP24788 784 aaKnown RBP31.17■■■□□ 2.58
Ptpre-202ENSMUST00000209256 Fmn1Q05860 1466 aa31.17■■■□□ 2.58
Ptpre-202ENSMUST00000209256 Aebp2Q9Z248 504 aaKnown RBP31.16■■■□□ 2.58
Ptpre-202ENSMUST00000209256 Wdr66E9Q743 1299 aa31.15■■■□□ 2.58
Ptpre-202ENSMUST00000209256 Unc13aQ4KUS2 1712 aa31.15■■■□□ 2.58
Ptpre-202ENSMUST00000209256 Nop58Q6DFW4 536 aaKnown RBP31.1■■■□□ 2.57
Ptpre-202ENSMUST00000209256 ClspnQ80YR7 1315 aa30.97■■■□□ 2.55
Ptpre-202ENSMUST00000209256 TnnQ80Z71 1560 aa30.91■■■□□ 2.54
Ptpre-202ENSMUST00000209256 Top2aQ01320 1528 aaKnown RBP30.9■■■□□ 2.54
Ptpre-202ENSMUST00000209256 Kif15Q6P9L6 1387 aa30.89■■■□□ 2.54
Ptpre-202ENSMUST00000209256 Phldb1Q6PDH0 1371 aaKnown RBP30.89■■■□□ 2.54
Ptpre-202ENSMUST00000209256 Gm38655A0A286YDK6 273 aa30.88■■■□□ 2.53
Ptpre-202ENSMUST00000209256 Lamc3Q9R0B6 1581 aa30.86■■■□□ 2.53
Ptpre-202ENSMUST00000209256 Ppargc1bQ8VHJ7 1014 aa30.81■■■□□ 2.52
Ptpre-202ENSMUST00000209256 Ubl4bQ9CQ84 188 aa30.77■■■□□ 2.52
Ptpre-202ENSMUST00000209256 UbtfP25976 765 aaKnown RBP30.74■■■□□ 2.51
Ptpre-202ENSMUST00000209256 Il27Q8K3I6 234 aa30.73■■■□□ 2.51
Ptpre-202ENSMUST00000209256 Dnajc5bQ9CQ94 199 aa30.73■■■□□ 2.51
Ptpre-202ENSMUST00000209256 Fam135aQ6NS59 1506 aa30.73■■■□□ 2.51
Ptpre-202ENSMUST00000209256 Rapgef2Q8CHG7 1496 aa30.59■■■□□ 2.49
Ptpre-202ENSMUST00000209256 Camsap1A2AHC3 1581 aa30.54■■■□□ 2.48
Ptpre-202ENSMUST00000209256 Cux2P70298 1426 aa30.53■■■□□ 2.48
Ptpre-202ENSMUST00000209256 DiexfQ8BTT6 772 aaKnown RBP30.53■■■□□ 2.48
Ptpre-202ENSMUST00000209256 Npm2Q80W85 207 aa30.48■■■□□ 2.47
Ptpre-202ENSMUST00000209256 TonslQ6NZL6 1363 aa30.45■■■□□ 2.47
Ptpre-202ENSMUST00000209256 Ccdc18Q640L5 1455 aa30.44■■■□□ 2.46
Ptpre-202ENSMUST00000209256 PtprkP35822 1457 aa30.39■■■□□ 2.46
Ptpre-202ENSMUST00000209256 Cep162Q6ZQ06 1403 aa30.39■■■□□ 2.46
Ptpre-202ENSMUST00000209256 Myt1lP97500 1187 aa30.36■■■□□ 2.45
Ptpre-202ENSMUST00000209256 Npm1Q61937 292 aaKnown RBP30.36■■■□□ 2.45
Ptpre-202ENSMUST00000209256 Fam71e1A1L3C1 212 aa30.33■■■□□ 2.45
Ptpre-202ENSMUST00000209256 Bcl11aQ9QYE3 773 aa30.32■■■□□ 2.44
Ptpre-202ENSMUST00000209256 Grin2bQ01097 1482 aa30.27■■■□□ 2.44
Ptpre-202ENSMUST00000209256 Hnrnpul2Q00PI9 745 aaKnown RBP30.22■■■□□ 2.43
Ptpre-202ENSMUST00000209256 NrkQ9R0G8 1455 aa30.21■■■□□ 2.43
Ptpre-202ENSMUST00000209256 SafbD3YXK2 937 aaKnown RBP30.2■■■□□ 2.43
Ptpre-202ENSMUST00000209256 Shroom4Q1W617 1475 aa30.2■■■□□ 2.42
Ptpre-202ENSMUST00000209256 Eif4g1Q6NZJ6 1600 aaKnown RBP30.19■■■□□ 2.42
Ptpre-202ENSMUST00000209256 Mapk8ip2Q9ERE9 830 aa30.16■■■□□ 2.42
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms