RNA–Protein interactions for RNA: ENSMUST00000198359.1

Trav13n-1-201, Transcript of T cell receptor alpha variable 13N-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13n-1, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1-201ENSMUST00000198359 Chic1Q8CBW7 227 aa17.37■□□□□ 0.37
Trav13n-1-201ENSMUST00000198359 Mapk8ip2Q9ERE9 830 aa16.05■□□□□ 0.16
Trav13n-1-201ENSMUST00000198359 Gm35339A0A140LHH9 1649 aa16.04■□□□□ 0.16
Trav13n-1-201ENSMUST00000198359 Plppr3Q7TPB0 716 aa15.85■□□□□ 0.13
Trav13n-1-201ENSMUST00000198359 Phf23Q8BSN5 401 aa15.8■□□□□ 0.12
Trav13n-1-201ENSMUST00000198359 NischQ80TM9 1593 aa15.64■□□□□ 0.09
Trav13n-1-201ENSMUST00000198359 Abcc9P70170 1546 aa15.41■□□□□ 0.06
Trav13n-1-201ENSMUST00000198359 Gab3Q8BSM5 595 aa15.32■□□□□ 0.04
Trav13n-1-201ENSMUST00000198359 Abcc8B2RUS7 1588 aa15.28■□□□□ 0.04
Trav13n-1-201ENSMUST00000198359 Kcna4Q61423 654 aa15.12■□□□□ 0.01
Trav13n-1-201ENSMUST00000198359 ScribQ80U72 1612 aa14.99□□□□□ -0.01
Trav13n-1-201ENSMUST00000198359 Senp3Q9EP97 568 aaKnown RBP14.8□□□□□ -0.04
Trav13n-1-201ENSMUST00000198359 NacadQ5SWP3 1504 aa14.46□□□□□ -0.1
Trav13n-1-201ENSMUST00000198359 Dnajc5bQ9CQ94 199 aa14.44□□□□□ -0.1
Trav13n-1-201ENSMUST00000198359 Kdm5dQ62240 1548 aa14.37□□□□□ -0.11
Trav13n-1-201ENSMUST00000198359 Sycp2Q9CUU3 1500 aa14.2□□□□□ -0.14
Trav13n-1-201ENSMUST00000198359 Ube2uB1AUC4 352 aa14.18□□□□□ -0.14
Trav13n-1-201ENSMUST00000198359 BicraF8VPZ9 1578 aa14.09□□□□□ -0.15
Trav13n-1-201ENSMUST00000198359 Ppargc1bQ8VHJ7 1014 aa14.03□□□□□ -0.16
Trav13n-1-201ENSMUST00000198359 Dcaf1Q80TR8 1506 aa13.95□□□□□ -0.18
Trav13n-1-201ENSMUST00000198359 Thoc2B1AZI6 1594 aaKnown RBP13.8□□□□□ -0.2
Trav13n-1-201ENSMUST00000198359 Pds5bQ4VA53 1446 aaKnown RBP13.77□□□□□ -0.21
Trav13n-1-201ENSMUST00000198359 Dmrt2Q8BG36 561 aa13.57□□□□□ -0.24
Trav13n-1-201ENSMUST00000198359 Cc2d2aQ8CFW7 1633 aa13.57□□□□□ -0.24
Trav13n-1-201ENSMUST00000198359 Rb1cc1Q9ESK9 1588 aa13.56□□□□□ -0.24
Trav13n-1-201ENSMUST00000198359 Atad2bE9Q166 1460 aaKnown RBP13.55□□□□□ -0.24
Trav13n-1-201ENSMUST00000198359 Dnajc5P60904 198 aa13.49□□□□□ -0.25
Trav13n-1-201ENSMUST00000198359 Crybg2B7ZCC2 1516 aa13.44□□□□□ -0.26
Trav13n-1-201ENSMUST00000198359 Ercc6F8VPZ5 1481 aa13.4□□□□□ -0.26
Trav13n-1-201ENSMUST00000198359 Fam135aQ6NS59 1506 aa13.39□□□□□ -0.27
Trav13n-1-201ENSMUST00000198359 Slc4a1apE9PX68 744 aa13.37□□□□□ -0.27
Trav13n-1-201ENSMUST00000198359 Baz1aO88379 1555 aa13.36□□□□□ -0.27
Trav13n-1-201ENSMUST00000198359 Smarca2Q6DIC0 1577 aa13.34□□□□□ -0.27
Trav13n-1-201ENSMUST00000198359 Ccdc180J3QNE4 1664 aa13.28□□□□□ -0.28
Trav13n-1-201ENSMUST00000198359 Phldb1Q6PDH0 1371 aaKnown RBP13.24□□□□□ -0.29
Trav13n-1-201ENSMUST00000198359 Baz1bQ9Z277 1479 aa13.23□□□□□ -0.29
Trav13n-1-201ENSMUST00000198359 Smarca4Q3TKT4 1613 aaKnown RBP13.23□□□□□ -0.29
Trav13n-1-201ENSMUST00000198359 Zcchc6Q5BLK4 1491 aaKnown RBP13.23□□□□□ -0.29
Trav13n-1-201ENSMUST00000198359 Iqgap2Q3UQ44 1575 aa13.22□□□□□ -0.29
Trav13n-1-201ENSMUST00000198359 Frmpd1A2AKB4 1549 aa13.22□□□□□ -0.29
Trav13n-1-201ENSMUST00000198359 Wdr62Q3U3T8 1523 aa13.2□□□□□ -0.3
Trav13n-1-201ENSMUST00000198359 Ubl4bQ9CQ84 188 aa13.17□□□□□ -0.3
Trav13n-1-201ENSMUST00000198359 Trim41Q5NCC3 630 aa13.15□□□□□ -0.3
Trav13n-1-201ENSMUST00000198359 Cecr2E9Q2Z1 1453 aa13.13□□□□□ -0.31
Trav13n-1-201ENSMUST00000198359 Mrc2Q64449 1479 aa13.08□□□□□ -0.32
Trav13n-1-201ENSMUST00000198359 Rhox8Q6VSS7 320 aa13.06□□□□□ -0.32
Trav13n-1-201ENSMUST00000198359 Fam71e1A1L3C1 212 aa13.05□□□□□ -0.32
Trav13n-1-201ENSMUST00000198359 Trap1aP19473 224 aa12.99□□□□□ -0.33
Trav13n-1-201ENSMUST00000198359 Unc13aQ4KUS2 1712 aa12.97□□□□□ -0.33
Trav13n-1-201ENSMUST00000198359 Ehmt2Q9Z148 1263 aaKnown RBP12.84□□□□□ -0.35
Trav13n-1-201ENSMUST00000198359 Lrriq1Q0P5X1 1673 aa12.81□□□□□ -0.36
Trav13n-1-201ENSMUST00000198359 Rsf1E9PWW9 1441 aaKnown RBP12.79□□□□□ -0.36
Trav13n-1-201ENSMUST00000198359 Shroom2A2ALU4 1481 aa12.76□□□□□ -0.37
Trav13n-1-201ENSMUST00000198359 Hoxd11P23813 323 aa12.73□□□□□ -0.37
Trav13n-1-201ENSMUST00000198359 CftrP26361 1476 aa12.72□□□□□ -0.37
Trav13n-1-201ENSMUST00000198359 Col17a1Q07563 1470 aa12.7□□□□□ -0.38
Trav13n-1-201ENSMUST00000198359 Cux2P70298 1426 aa12.67□□□□□ -0.38
Trav13n-1-201ENSMUST00000198359 Cttnbp2B9EJA2 1648 aa12.66□□□□□ -0.38
Trav13n-1-201ENSMUST00000198359 Kif21aQ9QXL2 1672 aa12.63□□□□□ -0.39
Trav13n-1-201ENSMUST00000198359 Synj1Q8CHC4 1574 aa12.62□□□□□ -0.39
Trav13n-1-201ENSMUST00000198359 Eif4g3Q80XI3 1579 aaKnown RBP12.61□□□□□ -0.39
Trav13n-1-201ENSMUST00000198359 Atf5O70191 283 aa12.61□□□□□ -0.39
Trav13n-1-201ENSMUST00000198359 Pabpn1Q8CCS6 302 aaKnown RBP12.57□□□□□ -0.4
Trav13n-1-201ENSMUST00000198359 Kif15Q6P9L6 1387 aa12.56□□□□□ -0.4
Trav13n-1-201ENSMUST00000198359 Brd4Q9ESU6 1400 aaKnown RBP12.54□□□□□ -0.4
Trav13n-1-201ENSMUST00000198359 Npm1Q61937 292 aaKnown RBP12.51□□□□□ -0.41
Trav13n-1-201ENSMUST00000198359 Top2bQ64511 1612 aa12.5□□□□□ -0.41
Trav13n-1-201ENSMUST00000198359 Pde4cQ3UEI1 686 aa12.49□□□□□ -0.41
Trav13n-1-201ENSMUST00000198359 AcrbpQ3V140 540 aa12.49□□□□□ -0.41
Trav13n-1-201ENSMUST00000198359 Nlrp6Q91WS2 869 aa12.49□□□□□ -0.41
Trav13n-1-201ENSMUST00000198359 Urb2E9Q7L1 1524 aaKnown RBP12.47□□□□□ -0.41
Trav13n-1-201ENSMUST00000198359 1700123L14RikQ3V2K7 440 aa12.46□□□□□ -0.41
Trav13n-1-201ENSMUST00000198359 Ppp4r2Q0VGB7 417 aa12.45□□□□□ -0.42
Trav13n-1-201ENSMUST00000198359 Lamc3Q9R0B6 1581 aa12.44□□□□□ -0.42
Trav13n-1-201ENSMUST00000198359 Esf1Q3V1V3 845 aaKnown RBP12.44□□□□□ -0.42
Trav13n-1-201ENSMUST00000198359 Plb1Q3TTY0 1478 aa12.42□□□□□ -0.42
Trav13n-1-201ENSMUST00000198359 Zcchc11B2RX14 1644 aaKnown RBP12.41□□□□□ -0.42
Trav13n-1-201ENSMUST00000198359 Pcdh10E9PXQ7 1057 aa12.41□□□□□ -0.42
Trav13n-1-201ENSMUST00000198359 Cep164Q5DU05 1446 aa12.41□□□□□ -0.42
Trav13n-1-201ENSMUST00000198359 Pelp1Q9DBD5 1123 aaKnown RBP12.39□□□□□ -0.43
Trav13n-1-201ENSMUST00000198359 Hs6st3Q9QYK4 470 aa12.38□□□□□ -0.43
Trav13n-1-201ENSMUST00000198359 Dhx29Q6PGC1 1365 aaKnown RBP12.37□□□□□ -0.43
Trav13n-1-201ENSMUST00000198359 Ccdc136Q3TVA9 1136 aa12.35□□□□□ -0.43
Trav13n-1-201ENSMUST00000198359 Cdca7Q9D0M2 382 aa12.33□□□□□ -0.44
Trav13n-1-201ENSMUST00000198359 Rtn4Q99P72 1162 aaKnown RBP12.32□□□□□ -0.44
Trav13n-1-201ENSMUST00000198359 LrpprcQ6PB66 1392 aaKnown RBP12.3□□□□□ -0.44
Trav13n-1-201ENSMUST00000198359 Rusc2Q80U22 1514 aa12.29□□□□□ -0.44
Trav13n-1-201ENSMUST00000198359 Ift140E9PY46 1464 aa12.27□□□□□ -0.45
Trav13n-1-201ENSMUST00000198359 Crocc2F6XLV1 1638 aa12.26□□□□□ -0.45
Trav13n-1-201ENSMUST00000198359 Il27Q8K3I6 234 aa12.25□□□□□ -0.45
Trav13n-1-201ENSMUST00000198359 Arhgef5E9Q7D5 1581 aa12.24□□□□□ -0.45
Trav13n-1-201ENSMUST00000198359 Rtl1Q7M732 1744 aa12.24□□□□□ -0.45
Trav13n-1-201ENSMUST00000198359 Ccdc18Q640L5 1455 aa12.22□□□□□ -0.45
Trav13n-1-201ENSMUST00000198359 Adgrl3Q80TS3 1537 aa12.21□□□□□ -0.46
Trav13n-1-201ENSMUST00000198359 Tshz2Q68FE9 1030 aa12.19□□□□□ -0.46
Trav13n-1-201ENSMUST00000198359 Chrna2Q91X60 512 aa12.19□□□□□ -0.46
Trav13n-1-201ENSMUST00000198359 Gm156Q58A37 223 aa12.17□□□□□ -0.46
Trav13n-1-201ENSMUST00000198359 PogzQ8BZH4 1409 aaKnown RBP12.17□□□□□ -0.46
Trav13n-1-201ENSMUST00000198359 Disp1Q3TDN0 1521 aa12.16□□□□□ -0.46
Trav13n-1-201ENSMUST00000198359 Ttbk1Q6PCN3 1308 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms