RNA–Protein interactions for RNA: ENSMUST00000197818.1

Gm43388-201, mousemouse

TSL 1 (best) BASIC

Gene Gm43388, Length 1,225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm43388-201ENSMUST00000197818 Chic1Q8CBW7 227 aa21.2■□□□□ 0.98
Gm43388-201ENSMUST00000197818 Mapk8ip2Q9ERE9 830 aa21.2■□□□□ 0.98
Gm43388-201ENSMUST00000197818 Phf23Q8BSN5 401 aa19.08■□□□□ 0.64
Gm43388-201ENSMUST00000197818 Gab3Q8BSM5 595 aa18.05■□□□□ 0.48
Gm43388-201ENSMUST00000197818 Plppr3Q7TPB0 716 aa17.93■□□□□ 0.46
Gm43388-201ENSMUST00000197818 Senp3Q9EP97 568 aaKnown RBP17.3■□□□□ 0.36
Gm43388-201ENSMUST00000197818 Gm35339A0A140LHH9 1649 aa16.75■□□□□ 0.27
Gm43388-201ENSMUST00000197818 NischQ80TM9 1593 aa16.24■□□□□ 0.19
Gm43388-201ENSMUST00000197818 Kcna4Q61423 654 aa16.05■□□□□ 0.16
Gm43388-201ENSMUST00000197818 Abcc9P70170 1546 aa15.96■□□□□ 0.15
Gm43388-201ENSMUST00000197818 Fam163aQ8CAA5 168 aa15.88■□□□□ 0.13
Gm43388-201ENSMUST00000197818 Abcc8B2RUS7 1588 aa15.85■□□□□ 0.13
Gm43388-201ENSMUST00000197818 ScribQ80U72 1612 aa15.61■□□□□ 0.09
Gm43388-201ENSMUST00000197818 Hoxd11P23813 323 aa15.42■□□□□ 0.06
Gm43388-201ENSMUST00000197818 Trap1aP19473 224 aa15.14■□□□□ 0.01
Gm43388-201ENSMUST00000197818 NacadQ5SWP3 1504 aa15□□□□□ -0.01
Gm43388-201ENSMUST00000197818 Kdm5dQ62240 1548 aa14.94□□□□□ -0.02
Gm43388-201ENSMUST00000197818 Dnajc5bQ9CQ94 199 aa14.86□□□□□ -0.03
Gm43388-201ENSMUST00000197818 Znf219Q6IQX8 726 aa14.83□□□□□ -0.04
Gm43388-201ENSMUST00000197818 Sycp2Q9CUU3 1500 aa14.73□□□□□ -0.05
Gm43388-201ENSMUST00000197818 BicraF8VPZ9 1578 aa14.64□□□□□ -0.07
Gm43388-201ENSMUST00000197818 Dcaf1Q80TR8 1506 aa14.53□□□□□ -0.08
Gm43388-201ENSMUST00000197818 ArsiQ32KI9 573 aa14.5□□□□□ -0.09
Gm43388-201ENSMUST00000197818 Chrna2Q91X60 512 aa14.42□□□□□ -0.1
Gm43388-201ENSMUST00000197818 Thoc2B1AZI6 1594 aaKnown RBP14.39□□□□□ -0.11
Gm43388-201ENSMUST00000197818 Rsph4aQ8BYM7 716 aa14.35□□□□□ -0.11
Gm43388-201ENSMUST00000197818 Dmrt2Q8BG36 561 aa14.33□□□□□ -0.12
Gm43388-201ENSMUST00000197818 Pds5bQ4VA53 1446 aaKnown RBP14.27□□□□□ -0.12
Gm43388-201ENSMUST00000197818 Rimbp2Q80U40 1072 aa14.22□□□□□ -0.13
Gm43388-201ENSMUST00000197818 Rb1cc1Q9ESK9 1588 aa14.12□□□□□ -0.15
Gm43388-201ENSMUST00000197818 Cc2d2aQ8CFW7 1633 aa14.11□□□□□ -0.15
Gm43388-201ENSMUST00000197818 Akt1s1Q9D1F4 257 aa14.09□□□□□ -0.15
Gm43388-201ENSMUST00000197818 Atad2bE9Q166 1460 aaKnown RBP14.06□□□□□ -0.16
Gm43388-201ENSMUST00000197818 Slc34a2Q9DBP0 697 aa14.02□□□□□ -0.17
Gm43388-201ENSMUST00000197818 Fam135aQ6NS59 1506 aa13.95□□□□□ -0.18
Gm43388-201ENSMUST00000197818 Ercc6F8VPZ5 1481 aa13.94□□□□□ -0.18
Gm43388-201ENSMUST00000197818 Dnajc5P60904 198 aa13.92□□□□□ -0.18
Gm43388-201ENSMUST00000197818 Crybg2B7ZCC2 1516 aa13.91□□□□□ -0.18
Gm43388-201ENSMUST00000197818 Ccdc180J3QNE4 1664 aa13.89□□□□□ -0.19
Gm43388-201ENSMUST00000197818 Baz1aO88379 1555 aa13.88□□□□□ -0.19
Gm43388-201ENSMUST00000197818 Smarca2Q6DIC0 1577 aa13.85□□□□□ -0.19
Gm43388-201ENSMUST00000197818 Atf5O70191 283 aa13.81□□□□□ -0.2
Gm43388-201ENSMUST00000197818 Baz1bQ9Z277 1479 aa13.8□□□□□ -0.2
Gm43388-201ENSMUST00000197818 Smarca4Q3TKT4 1613 aaKnown RBP13.77□□□□□ -0.21
Gm43388-201ENSMUST00000197818 Iqgap2Q3UQ44 1575 aa13.75□□□□□ -0.21
Gm43388-201ENSMUST00000197818 Wdr62Q3U3T8 1523 aa13.72□□□□□ -0.21
Gm43388-201ENSMUST00000197818 Zcchc6Q5BLK4 1491 aaKnown RBP13.7□□□□□ -0.22
Gm43388-201ENSMUST00000197818 Phldb1Q6PDH0 1371 aaKnown RBP13.7□□□□□ -0.22
Gm43388-201ENSMUST00000197818 Frmpd1A2AKB4 1549 aa13.69□□□□□ -0.22
Gm43388-201ENSMUST00000197818 Ppargc1bQ8VHJ7 1014 aa13.66□□□□□ -0.22
Gm43388-201ENSMUST00000197818 Hs6st3Q9QYK4 470 aa13.6□□□□□ -0.23
Gm43388-201ENSMUST00000197818 Mrc2Q64449 1479 aa13.59□□□□□ -0.23
Gm43388-201ENSMUST00000197818 Ppp4r2Q0VGB7 417 aa13.58□□□□□ -0.24
Gm43388-201ENSMUST00000197818 Unc13aQ4KUS2 1712 aa13.57□□□□□ -0.24
Gm43388-201ENSMUST00000197818 Trim41Q5NCC3 630 aa13.57□□□□□ -0.24
Gm43388-201ENSMUST00000197818 Cecr2E9Q2Z1 1453 aa13.56□□□□□ -0.24
Gm43388-201ENSMUST00000197818 Ubl4bQ9CQ84 188 aa13.54□□□□□ -0.24
Gm43388-201ENSMUST00000197818 Slc4a1apE9PX68 744 aa13.43□□□□□ -0.26
Gm43388-201ENSMUST00000197818 Rhox8Q6VSS7 320 aa13.43□□□□□ -0.26
Gm43388-201ENSMUST00000197818 GapdhsQ64467 440 aa13.42□□□□□ -0.26
Gm43388-201ENSMUST00000197818 Lrriq1Q0P5X1 1673 aa13.37□□□□□ -0.27
Gm43388-201ENSMUST00000197818 Bach1P97302 739 aa13.3□□□□□ -0.28
Gm43388-201ENSMUST00000197818 Rsf1E9PWW9 1441 aaKnown RBP13.29□□□□□ -0.28
Gm43388-201ENSMUST00000197818 Sox12Q04890 314 aa13.28□□□□□ -0.28
Gm43388-201ENSMUST00000197818 Shroom2A2ALU4 1481 aa13.28□□□□□ -0.28
Gm43388-201ENSMUST00000197818 Cttnbp2B9EJA2 1648 aa13.21□□□□□ -0.3
Gm43388-201ENSMUST00000197818 CftrP26361 1476 aa13.17□□□□□ -0.3
Gm43388-201ENSMUST00000197818 Eif4g3Q80XI3 1579 aaKnown RBP13.17□□□□□ -0.3
Gm43388-201ENSMUST00000197818 Kif21aQ9QXL2 1672 aa13.17□□□□□ -0.3
Gm43388-201ENSMUST00000197818 Col17a1Q07563 1470 aa13.16□□□□□ -0.3
Gm43388-201ENSMUST00000197818 Cux2P70298 1426 aa13.11□□□□□ -0.31
Gm43388-201ENSMUST00000197818 Synj1Q8CHC4 1574 aa13.11□□□□□ -0.31
Gm43388-201ENSMUST00000197818 1700123L14RikQ3V2K7 440 aa13.04□□□□□ -0.32
Gm43388-201ENSMUST00000197818 Znf704Q9ERQ3 566 aa13.03□□□□□ -0.32
Gm43388-201ENSMUST00000197818 Top2bQ64511 1612 aa13.02□□□□□ -0.33
Gm43388-201ENSMUST00000197818 Kif15Q6P9L6 1387 aa12.99□□□□□ -0.33
Gm43388-201ENSMUST00000197818 Slc4a5E9Q3M5 1116 aa12.99□□□□□ -0.33
Gm43388-201ENSMUST00000197818 Brd4Q9ESU6 1400 aaKnown RBP12.98□□□□□ -0.33
Gm43388-201ENSMUST00000197818 Pabpn1Q8CCS6 302 aaKnown RBP12.97□□□□□ -0.33
Gm43388-201ENSMUST00000197818 Zcchc11B2RX14 1644 aaKnown RBP12.93□□□□□ -0.34
Gm43388-201ENSMUST00000197818 Lamc3Q9R0B6 1581 aa12.92□□□□□ -0.34
Gm43388-201ENSMUST00000197818 Urb2E9Q7L1 1524 aaKnown RBP12.92□□□□□ -0.34
Gm43388-201ENSMUST00000197818 WdpcpQ8C456 722 aa12.89□□□□□ -0.35
Gm43388-201ENSMUST00000197818 Npm1Q61937 292 aaKnown RBP12.88□□□□□ -0.35
Gm43388-201ENSMUST00000197818 Plb1Q3TTY0 1478 aa12.87□□□□□ -0.35
Gm43388-201ENSMUST00000197818 Rtl1Q7M732 1744 aa12.87□□□□□ -0.35
Gm43388-201ENSMUST00000197818 Cep164Q5DU05 1446 aa12.85□□□□□ -0.35
Gm43388-201ENSMUST00000197818 Rusc2Q80U22 1514 aa12.81□□□□□ -0.36
Gm43388-201ENSMUST00000197818 Esf1Q3V1V3 845 aaKnown RBP12.8□□□□□ -0.36
Gm43388-201ENSMUST00000197818 Dhx29Q6PGC1 1365 aaKnown RBP12.8□□□□□ -0.36
Gm43388-201ENSMUST00000197818 Pelp1Q9DBD5 1123 aaKnown RBP12.79□□□□□ -0.36
Gm43388-201ENSMUST00000197818 Pcdh10E9PXQ7 1057 aa12.78□□□□□ -0.36
Gm43388-201ENSMUST00000197818 Arhgef5E9Q7D5 1581 aa12.77□□□□□ -0.37
Gm43388-201ENSMUST00000197818 Crocc2F6XLV1 1638 aa12.77□□□□□ -0.37
Gm43388-201ENSMUST00000197818 Ift140E9PY46 1464 aa12.72□□□□□ -0.37
Gm43388-201ENSMUST00000197818 LrpprcQ6PB66 1392 aaKnown RBP12.7□□□□□ -0.38
Gm43388-201ENSMUST00000197818 Egfem1Q8C088 590 aa12.69□□□□□ -0.38
Gm43388-201ENSMUST00000197818 Ccdc18Q640L5 1455 aa12.68□□□□□ -0.38
Gm43388-201ENSMUST00000197818 Ccdc136Q3TVA9 1136 aa12.67□□□□□ -0.38
Gm43388-201ENSMUST00000197818 Adgrl3Q80TS3 1537 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms