RNA–Protein interactions for RNA: ENSMUST00000195826.5

Pcdh9-208, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Pcdh9, Length 6,521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-208ENSMUST00000195826 Rhox8Q6VSS7 320 aa11.17□□□□□ -0.62
Pcdh9-208ENSMUST00000195826 Esf1Q3V1V3 845 aaKnown RBP10.18□□□□□ -0.78
Pcdh9-208ENSMUST00000195826 Zeb1Q64318 1117 aa9.99□□□□□ -0.81
Pcdh9-208ENSMUST00000195826 Ccdc136Q3TVA9 1136 aa9.97□□□□□ -0.81
Pcdh9-208ENSMUST00000195826 Abcc9P70170 1546 aa9.96□□□□□ -0.82
Pcdh9-208ENSMUST00000195826 Cngb1E1AZ71 1325 aa9.94□□□□□ -0.82
Pcdh9-208ENSMUST00000195826 Gm35339A0A140LHH9 1649 aa9.83□□□□□ -0.84
Pcdh9-208ENSMUST00000195826 NischQ80TM9 1593 aa9.83□□□□□ -0.84
Pcdh9-208ENSMUST00000195826 Npm2Q80W85 207 aa9.75□□□□□ -0.85
Pcdh9-208ENSMUST00000195826 Il27Q8K3I6 234 aa9.72□□□□□ -0.85
Pcdh9-208ENSMUST00000195826 Ube2uB1AUC4 352 aa9.67□□□□□ -0.86
Pcdh9-208ENSMUST00000195826 Trim41Q5NCC3 630 aa9.61□□□□□ -0.87
Pcdh9-208ENSMUST00000195826 Gab3Q8BSM5 595 aa9.6□□□□□ -0.87
Pcdh9-208ENSMUST00000195826 Myt1lP97500 1187 aa9.59□□□□□ -0.87
Pcdh9-208ENSMUST00000195826 Plppr3Q7TPB0 716 aa9.5□□□□□ -0.89
Pcdh9-208ENSMUST00000195826 Ttbk1Q6PCN3 1308 aa9.48□□□□□ -0.89
Pcdh9-208ENSMUST00000195826 Ifnlr1Q8CGK5 535 aa9.46□□□□□ -0.89
Pcdh9-208ENSMUST00000195826 Pelp1Q9DBD5 1123 aaKnown RBP9.4□□□□□ -0.9
Pcdh9-208ENSMUST00000195826 Zcchc6Q5BLK4 1491 aaKnown RBP9.37□□□□□ -0.91
Pcdh9-208ENSMUST00000195826 Npm1Q61937 292 aaKnown RBP9.36□□□□□ -0.91
Pcdh9-208ENSMUST00000195826 Ehmt2Q9Z148 1263 aaKnown RBP9.31□□□□□ -0.92
Pcdh9-208ENSMUST00000195826 Ubl4bQ9CQ84 188 aa9.25□□□□□ -0.93
Pcdh9-208ENSMUST00000195826 Gm13697A2AK42 830 aa9.23□□□□□ -0.93
Pcdh9-208ENSMUST00000195826 Ap3b1Q9Z1T1 1105 aa9.17□□□□□ -0.94
Pcdh9-208ENSMUST00000195826 Fkbp15Q6P9Q6 1216 aaKnown RBP9.17□□□□□ -0.94
Pcdh9-208ENSMUST00000195826 Zbtb7cQ8VCZ7 619 aa9.11□□□□□ -0.95
Pcdh9-208ENSMUST00000195826 Os9Q8K2C7 672 aa9.06□□□□□ -0.96
Pcdh9-208ENSMUST00000195826 Safb2Q80YR5 991 aaKnown RBP9.04□□□□□ -0.96
Pcdh9-208ENSMUST00000195826 Abcc8B2RUS7 1588 aa9.03□□□□□ -0.96
Pcdh9-208ENSMUST00000195826 HrcG5E8J6 738 aa9.02□□□□□ -0.97
Pcdh9-208ENSMUST00000195826 Hnrnpul2Q00PI9 745 aaKnown RBP9□□□□□ -0.97
Pcdh9-208ENSMUST00000195826 Amer1Q7TS75 1132 aa9□□□□□ -0.97
Pcdh9-208ENSMUST00000195826 Gm13695A2AK44 830 aa8.99□□□□□ -0.97
Pcdh9-208ENSMUST00000195826 UbtfP25976 765 aaKnown RBP8.99□□□□□ -0.97
Pcdh9-208ENSMUST00000195826 Fam50aQ9WV03 339 aaKnown RBP8.95□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 Atp1b4Q99ME6 356 aa8.94□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 Slc24a1Q91WD8 1130 aa8.93□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 Wdr66E9Q743 1299 aa8.93□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 Chic1Q8CBW7 227 aa8.93□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 Las1lA2BE28 776 aaKnown RBP8.91□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 MyclP10166 368 aa8.9□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 Lmod2Q3UHZ5 550 aa8.9□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 Rpgrip1Q9EPQ2 1331 aa8.9□□□□□ -0.98
Pcdh9-208ENSMUST00000195826 Neurod1Q60867 357 aa8.89□□□□□ -0.99
Pcdh9-208ENSMUST00000195826 NclP09405 707 aaKnown RBP8.88□□□□□ -0.99
Pcdh9-208ENSMUST00000195826 Erich6D3Z6S9 713 aa8.87□□□□□ -0.99
Pcdh9-208ENSMUST00000195826 Ercc6F8VPZ5 1481 aa8.87□□□□□ -0.99
Pcdh9-208ENSMUST00000195826 Ppp1r18Q8BQ30 594 aa8.85□□□□□ -0.99
Pcdh9-208ENSMUST00000195826 MlecQ6ZQI3 291 aaKnown RBP8.81□□□□□ -1
Pcdh9-208ENSMUST00000195826 NacadQ5SWP3 1504 aa8.77□□□□□ -1
Pcdh9-208ENSMUST00000195826 4930567H17RikQ3V0K5 233 aa8.73□□□□□ -1.01
Pcdh9-208ENSMUST00000195826 Kif15Q6P9L6 1387 aa8.72□□□□□ -1.01
Pcdh9-208ENSMUST00000195826 P3h3Q8CG70 732 aa8.71□□□□□ -1.01
Pcdh9-208ENSMUST00000195826 Ccdc180J3QNE4 1664 aa8.7□□□□□ -1.02
Pcdh9-208ENSMUST00000195826 Arhgap27A2AB59 869 aa8.69□□□□□ -1.02
Pcdh9-208ENSMUST00000195826 Zbtb4Q5F293 982 aa8.69□□□□□ -1.02
Pcdh9-208ENSMUST00000195826 Brd4Q9ESU6 1400 aaKnown RBP8.69□□□□□ -1.02
Pcdh9-208ENSMUST00000195826 Ecm2Q5FW85 670 aa8.67□□□□□ -1.02
Pcdh9-208ENSMUST00000195826 Rb1cc1Q9ESK9 1588 aa8.67□□□□□ -1.02
Pcdh9-208ENSMUST00000195826 Prdm10Q3UTQ7 1184 aa8.65□□□□□ -1.02
Pcdh9-208ENSMUST00000195826 Rsf1E9PWW9 1441 aaKnown RBP8.64□□□□□ -1.03
Pcdh9-208ENSMUST00000195826 Pds5bQ4VA53 1446 aaKnown RBP8.63□□□□□ -1.03
Pcdh9-208ENSMUST00000195826 Arid3cA6PWV5 409 aa8.63□□□□□ -1.03
Pcdh9-208ENSMUST00000195826 Plekhg3Q4VAC9 1341 aa8.63□□□□□ -1.03
Pcdh9-208ENSMUST00000195826 Ggt6Q6PDE7 497 aa8.61□□□□□ -1.03
Pcdh9-208ENSMUST00000195826 Pabpn1Q8CCS6 302 aaKnown RBP8.6□□□□□ -1.03
Pcdh9-208ENSMUST00000195826 Cep164Q5DU05 1446 aa8.59□□□□□ -1.03
Pcdh9-208ENSMUST00000195826 AknaQ80VW7 1404 aa8.58□□□□□ -1.04
Pcdh9-208ENSMUST00000195826 DiexfQ8BTT6 772 aaKnown RBP8.54□□□□□ -1.04
Pcdh9-208ENSMUST00000195826 Anp32bQ9EST5 272 aaKnown RBP8.54□□□□□ -1.04
Pcdh9-208ENSMUST00000195826 Ccdc18Q640L5 1455 aa8.54□□□□□ -1.04
Pcdh9-208ENSMUST00000195826 Kdm5dQ62240 1548 aa8.52□□□□□ -1.05
Pcdh9-208ENSMUST00000195826 Chic2Q9D9G3 165 aa8.47□□□□□ -1.05
Pcdh9-208ENSMUST00000195826 Cdk11bP24788 784 aaKnown RBP8.45□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Hdac5Q9Z2V6 1113 aa8.45□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Bcl11bQ99PV8 884 aa8.44□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Arid4bA2CG63 1314 aaKnown RBP8.44□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Cyb5rlB1AS42 316 aa8.43□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 NgefQ8CHT1 710 aa8.43□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Phldb1Q6PDH0 1371 aaKnown RBP8.42□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Dcaf1Q80TR8 1506 aa8.41□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Ubap1lG3UW59 384 aa8.4□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Pip4k2bQ80XI4 416 aa8.4□□□□□ -1.06
Pcdh9-208ENSMUST00000195826 Clip1Q922J3 1391 aa8.39□□□□□ -1.07
Pcdh9-208ENSMUST00000195826 Cux2P70298 1426 aa8.39□□□□□ -1.07
Pcdh9-208ENSMUST00000195826 NrdcQ8BHG1 1161 aa8.38□□□□□ -1.07
Pcdh9-208ENSMUST00000195826 Rrp7aQ9D1C9 280 aaKnown RBP8.37□□□□□ -1.07
Pcdh9-208ENSMUST00000195826 Clstn2Q9ER65 966 aa8.37□□□□□ -1.07
Pcdh9-208ENSMUST00000195826 Nlrp6Q91WS2 869 aa8.36□□□□□ -1.07
Pcdh9-208ENSMUST00000195826 Fbln2P37889 1221 aa8.35□□□□□ -1.07
Pcdh9-208ENSMUST00000195826 Baz1aO88379 1555 aa8.34□□□□□ -1.07
Pcdh9-208ENSMUST00000195826 Sycp2Q9CUU3 1500 aa8.33□□□□□ -1.08
Pcdh9-208ENSMUST00000195826 Dnajc5bQ9CQ94 199 aa8.33□□□□□ -1.08
Pcdh9-208ENSMUST00000195826 Stk24Q99KH8 431 aa8.33□□□□□ -1.08
Pcdh9-208ENSMUST00000195826 BlmO88700 1416 aa8.32□□□□□ -1.08
Pcdh9-208ENSMUST00000195826 Ppm1fQ8CGA0 452 aa8.32□□□□□ -1.08
Pcdh9-208ENSMUST00000195826 NefmP08553 848 aa8.32□□□□□ -1.08
Pcdh9-208ENSMUST00000195826 Lemd3Q9WU40 921 aa8.31□□□□□ -1.08
Pcdh9-208ENSMUST00000195826 Irx6Q9ER75 438 aa8.31□□□□□ -1.08
Pcdh9-208ENSMUST00000195826 Grwd1Q810D6 446 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 69.5 ms