RNA–Protein interactions for RNA: ENSMUST00000195355.1

Pcdh8-204, Transcript of Protocadherin-8, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdh8, Length 3,704 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8-204ENSMUST00000195355 Rhox8Q6VSS7 320 aa22.11■■□□□ 1.13
Pcdh8-204ENSMUST00000195355 Ehmt2Q9Z148 1263 aaKnown RBP20.9■□□□□ 0.94
Pcdh8-204ENSMUST00000195355 NischQ80TM9 1593 aa20.81■□□□□ 0.92
Pcdh8-204ENSMUST00000195355 Rpgrip1Q9EPQ2 1331 aa20.29■□□□□ 0.84
Pcdh8-204ENSMUST00000195355 Ccdc136Q3TVA9 1136 aa20.24■□□□□ 0.83
Pcdh8-204ENSMUST00000195355 Acin1Q9JIX8 1338 aaKnown RBP19.79■□□□□ 0.76
Pcdh8-204ENSMUST00000195355 Abcc9P70170 1546 aa19.72■□□□□ 0.75
Pcdh8-204ENSMUST00000195355 Trim41Q5NCC3 630 aa19.64■□□□□ 0.74
Pcdh8-204ENSMUST00000195355 Gab3Q8BSM5 595 aa19.6■□□□□ 0.73
Pcdh8-204ENSMUST00000195355 Zeb1Q64318 1117 aa19.59■□□□□ 0.73
Pcdh8-204ENSMUST00000195355 Pcgf6Q99NA9 353 aa19.51■□□□□ 0.71
Pcdh8-204ENSMUST00000195355 Ccdc180J3QNE4 1664 aa19.45■□□□□ 0.7
Pcdh8-204ENSMUST00000195355 Cngb1E1AZ71 1325 aa19.43■□□□□ 0.7
Pcdh8-204ENSMUST00000195355 Abcc8B2RUS7 1588 aa19.29■□□□□ 0.68
Pcdh8-204ENSMUST00000195355 HrcG5E8J6 738 aa19.25■□□□□ 0.67
Pcdh8-204ENSMUST00000195355 Supt5hO55201 1082 aaKnown RBP19.21■□□□□ 0.67
Pcdh8-204ENSMUST00000195355 Wdr66E9Q743 1299 aa19.19■□□□□ 0.66
Pcdh8-204ENSMUST00000195355 Rtl1Q7M732 1744 aa19.16■□□□□ 0.66
Pcdh8-204ENSMUST00000195355 Esf1Q3V1V3 845 aaKnown RBP19.07■□□□□ 0.64
Pcdh8-204ENSMUST00000195355 Ppargc1bQ8VHJ7 1014 aa18.96■□□□□ 0.63
Pcdh8-204ENSMUST00000195355 UbtfP25976 765 aaKnown RBP18.91■□□□□ 0.62
Pcdh8-204ENSMUST00000195355 Myt1lP97500 1187 aa18.89■□□□□ 0.61
Pcdh8-204ENSMUST00000195355 Las1lA2BE28 776 aaKnown RBP18.86■□□□□ 0.61
Pcdh8-204ENSMUST00000195355 Gm35339A0A140LHH9 1649 aa18.78■□□□□ 0.6
Pcdh8-204ENSMUST00000195355 Neurod1Q60867 357 aa18.74■□□□□ 0.59
Pcdh8-204ENSMUST00000195355 NefmP08553 848 aa18.72■□□□□ 0.59
Pcdh8-204ENSMUST00000195355 Zcchc6Q5BLK4 1491 aaKnown RBP18.72■□□□□ 0.59
Pcdh8-204ENSMUST00000195355 Mier1Q5UAK0 511 aa18.68■□□□□ 0.58
Pcdh8-204ENSMUST00000195355 Npm2Q80W85 207 aa18.61■□□□□ 0.57
Pcdh8-204ENSMUST00000195355 Chic1Q8CBW7 227 aa18.58■□□□□ 0.56
Pcdh8-204ENSMUST00000195355 Dcaf1Q80TR8 1506 aa18.57■□□□□ 0.56
Pcdh8-204ENSMUST00000195355 Sall2Q9QX96 1004 aa18.53■□□□□ 0.56
Pcdh8-204ENSMUST00000195355 Cdk11bP24788 784 aaKnown RBP18.42■□□□□ 0.54
Pcdh8-204ENSMUST00000195355 Gm38655A0A286YDK6 273 aa18.38■□□□□ 0.53
Pcdh8-204ENSMUST00000195355 Nop58Q6DFW4 536 aaKnown RBP18.38■□□□□ 0.53
Pcdh8-204ENSMUST00000195355 Csrnp3P59055 597 aa18.33■□□□□ 0.52
Pcdh8-204ENSMUST00000195355 CenpbP27790 599 aa18.27■□□□□ 0.51
Pcdh8-204ENSMUST00000195355 Rb1cc1Q9ESK9 1588 aa18.26■□□□□ 0.51
Pcdh8-204ENSMUST00000195355 Ap3b1Q9Z1T1 1105 aa18.25■□□□□ 0.51
Pcdh8-204ENSMUST00000195355 Ube2uB1AUC4 352 aa18.24■□□□□ 0.51
Pcdh8-204ENSMUST00000195355 Cep164Q5DU05 1446 aa18.24■□□□□ 0.51
Pcdh8-204ENSMUST00000195355 Il27Q8K3I6 234 aa18.19■□□□□ 0.5
Pcdh8-204ENSMUST00000195355 Slc24a1Q91WD8 1130 aa18.17■□□□□ 0.5
Pcdh8-204ENSMUST00000195355 Plekhg3Q4VAC9 1341 aa18.16■□□□□ 0.5
Pcdh8-204ENSMUST00000195355 Aebp2Q9Z248 504 aaKnown RBP18.15■□□□□ 0.5
Pcdh8-204ENSMUST00000195355 Mapk8ip2Q9ERE9 830 aa18.14■□□□□ 0.49
Pcdh8-204ENSMUST00000195355 TonslQ6NZL6 1363 aa18.1■□□□□ 0.49
Pcdh8-204ENSMUST00000195355 Eid3Q3V124 375 aa18.08■□□□□ 0.48
Pcdh8-204ENSMUST00000195355 1700123L14RikQ3V2K7 440 aa18.06■□□□□ 0.48
Pcdh8-204ENSMUST00000195355 Anks4bQ8K3X6 423 aa18.05■□□□□ 0.48
Pcdh8-204ENSMUST00000195355 ClspnQ80YR7 1315 aa17.99■□□□□ 0.47
Pcdh8-204ENSMUST00000195355 Fam50aQ9WV03 339 aaKnown RBP17.97■□□□□ 0.47
Pcdh8-204ENSMUST00000195355 Rsf1E9PWW9 1441 aaKnown RBP17.97■□□□□ 0.47
Pcdh8-204ENSMUST00000195355 NclP09405 707 aaKnown RBP17.88■□□□□ 0.45
Pcdh8-204ENSMUST00000195355 Baz1aO88379 1555 aa17.86■□□□□ 0.45
Pcdh8-204ENSMUST00000195355 DiexfQ8BTT6 772 aaKnown RBP17.86■□□□□ 0.45
Pcdh8-204ENSMUST00000195355 Lmod2Q3UHZ5 550 aa17.78■□□□□ 0.44
Pcdh8-204ENSMUST00000195355 Brd4Q9ESU6 1400 aaKnown RBP17.78■□□□□ 0.44
Pcdh8-204ENSMUST00000195355 Ccdc88bQ4QRL3 1481 aa17.77■□□□□ 0.43
Pcdh8-204ENSMUST00000195355 Eif5bQ05D44 1216 aaKnown RBP17.74■□□□□ 0.43
Pcdh8-204ENSMUST00000195355 Kdm5dQ62240 1548 aa17.72■□□□□ 0.43
Pcdh8-204ENSMUST00000195355 Clip1Q922J3 1391 aa17.7■□□□□ 0.42
Pcdh8-204ENSMUST00000195355 Aplp2Q06335 707 aa17.67■□□□□ 0.42
Pcdh8-204ENSMUST00000195355 Ttbk1Q6PCN3 1308 aa17.64■□□□□ 0.41
Pcdh8-204ENSMUST00000195355 NacadQ5SWP3 1504 aa17.62■□□□□ 0.41
Pcdh8-204ENSMUST00000195355 Tnnt3Q9QZ47 272 aa17.61■□□□□ 0.41
Pcdh8-204ENSMUST00000195355 Stra8P70278 393 aa17.6■□□□□ 0.41
Pcdh8-204ENSMUST00000195355 Golga3P55937 1487 aa17.6■□□□□ 0.41
Pcdh8-204ENSMUST00000195355 SafbD3YXK2 937 aaKnown RBP17.6■□□□□ 0.41
Pcdh8-204ENSMUST00000195355 Pelp1Q9DBD5 1123 aaKnown RBP17.55■□□□□ 0.4
Pcdh8-204ENSMUST00000195355 Hnrnpul2Q00PI9 745 aaKnown RBP17.5■□□□□ 0.39
Pcdh8-204ENSMUST00000195355 Myt1Q8CFC2 1127 aa17.49■□□□□ 0.39
Pcdh8-204ENSMUST00000195355 ScribQ80U72 1612 aa17.48■□□□□ 0.39
Pcdh8-204ENSMUST00000195355 Fam71e1A1L3C1 212 aa17.48■□□□□ 0.39
Pcdh8-204ENSMUST00000195355 Cecr2E9Q2Z1 1453 aa17.4■□□□□ 0.38
Pcdh8-204ENSMUST00000195355 Amer1Q7TS75 1132 aa17.4■□□□□ 0.38
Pcdh8-204ENSMUST00000195355 NrdcQ8BHG1 1161 aa17.37■□□□□ 0.37
Pcdh8-204ENSMUST00000195355 Anp32aO35381 247 aa17.33■□□□□ 0.36
Pcdh8-204ENSMUST00000195355 Chic2Q9D9G3 165 aa17.29■□□□□ 0.36
Pcdh8-204ENSMUST00000195355 Zbtb4Q5F293 982 aa17.28■□□□□ 0.36
Pcdh8-204ENSMUST00000195355 Plppr3Q7TPB0 716 aa17.28■□□□□ 0.36
Pcdh8-204ENSMUST00000195355 BlmO88700 1416 aa17.27■□□□□ 0.36
Pcdh8-204ENSMUST00000195355 Calr4Q3TQS0 420 aa17.27■□□□□ 0.35
Pcdh8-204ENSMUST00000195355 Smarca2Q6DIC0 1577 aa17.25■□□□□ 0.35
Pcdh8-204ENSMUST00000195355 Zbtb7cQ8VCZ7 619 aa17.24■□□□□ 0.35
Pcdh8-204ENSMUST00000195355 Setd5Q5XJV7 1441 aa17.24■□□□□ 0.35
Pcdh8-204ENSMUST00000195355 Ppp4r2Q0VGB7 417 aa17.23■□□□□ 0.35
Pcdh8-204ENSMUST00000195355 P3h3Q8CG70 732 aa17.23■□□□□ 0.35
Pcdh8-204ENSMUST00000195355 Cep162Q6ZQ06 1403 aa17.21■□□□□ 0.34
Pcdh8-204ENSMUST00000195355 Npm1Q61937 292 aaKnown RBP17.19■□□□□ 0.34
Pcdh8-204ENSMUST00000195355 Hspa5P20029 655 aaKnown RBP17.15■□□□□ 0.34
Pcdh8-204ENSMUST00000195355 Mrs2Q5NCE8 434 aa17.13■□□□□ 0.33
Pcdh8-204ENSMUST00000195355 Sin3aQ60520 1274 aaKnown RBP17.12■□□□□ 0.33
Pcdh8-204ENSMUST00000195355 Synj1Q8CHC4 1574 aa17.11■□□□□ 0.33
Pcdh8-204ENSMUST00000195355 Rapgef2Q8CHG7 1496 aa17.11■□□□□ 0.33
Pcdh8-204ENSMUST00000195355 CftrP26361 1476 aa17.08■□□□□ 0.32
Pcdh8-204ENSMUST00000195355 Sycp2Q9CUU3 1500 aa17.07■□□□□ 0.32
Pcdh8-204ENSMUST00000195355 Eea1Q8BL66 1411 aa17.04■□□□□ 0.32
Pcdh8-204ENSMUST00000195355 4933416C03RikQ3V063 378 aa17.02■□□□□ 0.31
Pcdh8-204ENSMUST00000195355 Wdr43Q6ZQL4 677 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 93.1 ms