RNA–Protein interactions for RNA: ENSMUST00000192295.1

Pcdha4-201, Transcript of Protocadherin alpha-4, mousemouse

TSL 1 (best) BASIC

Gene Pcdha4, Length 4,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4-201ENSMUST00000192295 Rhox8Q6VSS7 320 aa19.36■□□□□ 0.69
Pcdha4-201ENSMUST00000192295 NischQ80TM9 1593 aa18.37■□□□□ 0.53
Pcdha4-201ENSMUST00000192295 Gm35339A0A140LHH9 1649 aa18.02■□□□□ 0.47
Pcdha4-201ENSMUST00000192295 Ccdc136Q3TVA9 1136 aa17.67■□□□□ 0.42
Pcdha4-201ENSMUST00000192295 Abcc9P70170 1546 aa17.58■□□□□ 0.4
Pcdha4-201ENSMUST00000192295 Ehmt2Q9Z148 1263 aaKnown RBP17.41■□□□□ 0.38
Pcdha4-201ENSMUST00000192295 Abcc8B2RUS7 1588 aa17.26■□□□□ 0.35
Pcdha4-201ENSMUST00000192295 Cngb1E1AZ71 1325 aa17.08■□□□□ 0.32
Pcdha4-201ENSMUST00000192295 Esf1Q3V1V3 845 aaKnown RBP17.02■□□□□ 0.32
Pcdha4-201ENSMUST00000192295 Gab3Q8BSM5 595 aa16.96■□□□□ 0.31
Pcdha4-201ENSMUST00000192295 Trim41Q5NCC3 630 aa16.89■□□□□ 0.3
Pcdha4-201ENSMUST00000192295 Zcchc6Q5BLK4 1491 aaKnown RBP16.62■□□□□ 0.25
Pcdha4-201ENSMUST00000192295 Myt1lP97500 1187 aa16.51■□□□□ 0.23
Pcdha4-201ENSMUST00000192295 Npm2Q80W85 207 aa16.43■□□□□ 0.22
Pcdha4-201ENSMUST00000192295 Zeb1Q64318 1117 aa16.39■□□□□ 0.21
Pcdha4-201ENSMUST00000192295 ScribQ80U72 1612 aa16.35■□□□□ 0.21
Pcdha4-201ENSMUST00000192295 Rpgrip1Q9EPQ2 1331 aa16.33■□□□□ 0.2
Pcdha4-201ENSMUST00000192295 Il27Q8K3I6 234 aa16.31■□□□□ 0.2
Pcdha4-201ENSMUST00000192295 Ccdc180J3QNE4 1664 aa16.31■□□□□ 0.2
Pcdha4-201ENSMUST00000192295 HrcG5E8J6 738 aa16.26■□□□□ 0.19
Pcdha4-201ENSMUST00000192295 UbtfP25976 765 aaKnown RBP16.15■□□□□ 0.18
Pcdha4-201ENSMUST00000192295 Rtl1Q7M732 1744 aa16.13■□□□□ 0.17
Pcdha4-201ENSMUST00000192295 Rb1cc1Q9ESK9 1588 aa16.09■□□□□ 0.17
Pcdha4-201ENSMUST00000192295 Wdr66E9Q743 1299 aa16.05■□□□□ 0.16
Pcdha4-201ENSMUST00000192295 Acin1Q9JIX8 1338 aaKnown RBP16.04■□□□□ 0.16
Pcdha4-201ENSMUST00000192295 Ube2uB1AUC4 352 aa16■□□□□ 0.15
Pcdha4-201ENSMUST00000192295 Chic1Q8CBW7 227 aa15.96■□□□□ 0.15
Pcdha4-201ENSMUST00000192295 Dcaf1Q80TR8 1506 aa15.96■□□□□ 0.15
Pcdha4-201ENSMUST00000192295 Ap3b1Q9Z1T1 1105 aa15.94■□□□□ 0.14
Pcdha4-201ENSMUST00000192295 Kdm5dQ62240 1548 aa15.9■□□□□ 0.14
Pcdha4-201ENSMUST00000192295 NacadQ5SWP3 1504 aa15.87■□□□□ 0.13
Pcdha4-201ENSMUST00000192295 Las1lA2BE28 776 aaKnown RBP15.86■□□□□ 0.13
Pcdha4-201ENSMUST00000192295 Ppargc1bQ8VHJ7 1014 aa15.73■□□□□ 0.11
Pcdha4-201ENSMUST00000192295 Baz1aO88379 1555 aa15.71■□□□□ 0.11
Pcdha4-201ENSMUST00000192295 Brd4Q9ESU6 1400 aaKnown RBP15.69■□□□□ 0.1
Pcdha4-201ENSMUST00000192295 Plekhg3Q4VAC9 1341 aa15.64■□□□□ 0.09
Pcdha4-201ENSMUST00000192295 Fam50aQ9WV03 339 aaKnown RBP15.6■□□□□ 0.09
Pcdha4-201ENSMUST00000192295 Mier1Q5UAK0 511 aa15.59■□□□□ 0.09
Pcdha4-201ENSMUST00000192295 NefmP08553 848 aa15.59■□□□□ 0.09
Pcdha4-201ENSMUST00000192295 Npm1Q61937 292 aaKnown RBP15.59■□□□□ 0.09
Pcdha4-201ENSMUST00000192295 Lmod2Q3UHZ5 550 aa15.56■□□□□ 0.08
Pcdha4-201ENSMUST00000192295 Pcgf6Q99NA9 353 aa15.51■□□□□ 0.07
Pcdha4-201ENSMUST00000192295 Cep164Q5DU05 1446 aa15.51■□□□□ 0.07
Pcdha4-201ENSMUST00000192295 Supt5hO55201 1082 aaKnown RBP15.46■□□□□ 0.07
Pcdha4-201ENSMUST00000192295 Ubl4bQ9CQ84 188 aa15.45■□□□□ 0.06
Pcdha4-201ENSMUST00000192295 Sycp2Q9CUU3 1500 aa15.41■□□□□ 0.06
Pcdha4-201ENSMUST00000192295 Rsf1E9PWW9 1441 aaKnown RBP15.38■□□□□ 0.05
Pcdha4-201ENSMUST00000192295 Neurod1Q60867 357 aa15.37■□□□□ 0.05
Pcdha4-201ENSMUST00000192295 Eid3Q3V124 375 aa15.35■□□□□ 0.05
Pcdha4-201ENSMUST00000192295 Cecr2E9Q2Z1 1453 aa15.34■□□□□ 0.05
Pcdha4-201ENSMUST00000192295 Golga3P55937 1487 aa15.33■□□□□ 0.04
Pcdha4-201ENSMUST00000192295 Slc24a1Q91WD8 1130 aa15.33■□□□□ 0.04
Pcdha4-201ENSMUST00000192295 Clip1Q922J3 1391 aa15.29■□□□□ 0.04
Pcdha4-201ENSMUST00000192295 Smarca2Q6DIC0 1577 aa15.28■□□□□ 0.04
Pcdha4-201ENSMUST00000192295 Crybg2B7ZCC2 1516 aa15.27■□□□□ 0.04
Pcdha4-201ENSMUST00000192295 Ccdc88bQ4QRL3 1481 aa15.27■□□□□ 0.04
Pcdha4-201ENSMUST00000192295 Zbtb7cQ8VCZ7 619 aa15.27■□□□□ 0.03
Pcdha4-201ENSMUST00000192295 Fkbp15Q6P9Q6 1216 aaKnown RBP15.23■□□□□ 0.03
Pcdha4-201ENSMUST00000192295 NclP09405 707 aaKnown RBP15.23■□□□□ 0.03
Pcdha4-201ENSMUST00000192295 Ifnlr1Q8CGK5 535 aa15.23■□□□□ 0.03
Pcdha4-201ENSMUST00000192295 Kif15Q6P9L6 1387 aa15.22■□□□□ 0.03
Pcdha4-201ENSMUST00000192295 BicraF8VPZ9 1578 aa15.21■□□□□ 0.02
Pcdha4-201ENSMUST00000192295 TonslQ6NZL6 1363 aa15.2■□□□□ 0.02
Pcdha4-201ENSMUST00000192295 Mapk8ip2Q9ERE9 830 aa15.19■□□□□ 0.02
Pcdha4-201ENSMUST00000192295 CftrP26361 1476 aa15.06■□□□□ 0
Pcdha4-201ENSMUST00000192295 Sall2Q9QX96 1004 aa15.06■□□□□ 0
Pcdha4-201ENSMUST00000192295 Cdk11bP24788 784 aaKnown RBP15.05■□□□□ 0
Pcdha4-201ENSMUST00000192295 Nop58Q6DFW4 536 aaKnown RBP15.04■□□□□ -0
Pcdha4-201ENSMUST00000192295 Chic2Q9D9G3 165 aa15.04■□□□□ -0
Pcdha4-201ENSMUST00000192295 Setd5Q5XJV7 1441 aa15.01□□□□□ -0.01
Pcdha4-201ENSMUST00000192295 Synj1Q8CHC4 1574 aa15.01□□□□□ -0.01
Pcdha4-201ENSMUST00000192295 BlmO88700 1416 aa15□□□□□ -0.01
Pcdha4-201ENSMUST00000192295 Zbtb4Q5F293 982 aa15□□□□□ -0.01
Pcdha4-201ENSMUST00000192295 Hnrnpul2Q00PI9 745 aaKnown RBP14.98□□□□□ -0.01
Pcdha4-201ENSMUST00000192295 Ercc6F8VPZ5 1481 aa14.97□□□□□ -0.01
Pcdha4-201ENSMUST00000192295 Pds5bQ4VA53 1446 aaKnown RBP14.94□□□□□ -0.02
Pcdha4-201ENSMUST00000192295 Aebp2Q9Z248 504 aaKnown RBP14.87□□□□□ -0.03
Pcdha4-201ENSMUST00000192295 Os9Q8K2C7 672 aa14.87□□□□□ -0.03
Pcdha4-201ENSMUST00000192295 Ccdc18Q640L5 1455 aa14.84□□□□□ -0.03
Pcdha4-201ENSMUST00000192295 Eif5bQ05D44 1216 aaKnown RBP14.84□□□□□ -0.03
Pcdha4-201ENSMUST00000192295 ClspnQ80YR7 1315 aa14.83□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Cep162Q6ZQ06 1403 aa14.83□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Pelp1Q9DBD5 1123 aaKnown RBP14.82□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Fmn1Q05860 1466 aa14.81□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Atad2bE9Q166 1460 aaKnown RBP14.79□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Eea1Q8BL66 1411 aa14.78□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Erich6D3Z6S9 713 aa14.78□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Arhgap27A2AB59 869 aa14.78□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Smarca4Q3TKT4 1613 aaKnown RBP14.77□□□□□ -0.04
Pcdha4-201ENSMUST00000192295 Rapgef2Q8CHG7 1496 aa14.76□□□□□ -0.05
Pcdha4-201ENSMUST00000192295 Cux2P70298 1426 aa14.74□□□□□ -0.05
Pcdha4-201ENSMUST00000192295 NrdcQ8BHG1 1161 aa14.74□□□□□ -0.05
Pcdha4-201ENSMUST00000192295 Plppr3Q7TPB0 716 aa14.73□□□□□ -0.05
Pcdha4-201ENSMUST00000192295 Prdm10Q3UTQ7 1184 aa14.73□□□□□ -0.05
Pcdha4-201ENSMUST00000192295 Stra8P70278 393 aa14.72□□□□□ -0.05
Pcdha4-201ENSMUST00000192295 Gm38655A0A286YDK6 273 aa14.69□□□□□ -0.06
Pcdha4-201ENSMUST00000192295 Iqgap2Q3UQ44 1575 aa14.66□□□□□ -0.06
Pcdha4-201ENSMUST00000192295 Cttnbp2B9EJA2 1648 aa14.66□□□□□ -0.06
Pcdha4-201ENSMUST00000192295 Phldb1Q6PDH0 1371 aaKnown RBP14.62□□□□□ -0.07
Pcdha4-201ENSMUST00000192295 Aebp1Q640N1 1128 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms