RNA–Protein interactions for RNA: ENSMUST00000190949.1

Gm28979-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28979, Length 1,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28979-201ENSMUST00000190949 Chic1Q8CBW7 227 aa32.14■■■□□ 2.74
Gm28979-201ENSMUST00000190949 Mapk8ip2Q9ERE9 830 aa31.98■■■□□ 2.71
Gm28979-201ENSMUST00000190949 Phf23Q8BSN5 401 aa28.95■■■□□ 2.23
Gm28979-201ENSMUST00000190949 Gab3Q8BSM5 595 aa27.49■■□□□ 1.99
Gm28979-201ENSMUST00000190949 Plppr3Q7TPB0 716 aa27.45■■□□□ 1.98
Gm28979-201ENSMUST00000190949 Senp3Q9EP97 568 aaKnown RBP26.32■■□□□ 1.8
Gm28979-201ENSMUST00000190949 Kcna4Q61423 654 aa24.75■■□□□ 1.55
Gm28979-201ENSMUST00000190949 Fam163aQ8CAA5 168 aa23.94■■□□□ 1.42
Gm28979-201ENSMUST00000190949 Hoxd11P23813 323 aa23.32■■□□□ 1.32
Gm28979-201ENSMUST00000190949 Trap1aP19473 224 aa23.18■■□□□ 1.3
Gm28979-201ENSMUST00000190949 Znf219Q6IQX8 726 aa22.49■■□□□ 1.19
Gm28979-201ENSMUST00000190949 Dmrt2Q8BG36 561 aa22.04■■□□□ 1.12
Gm28979-201ENSMUST00000190949 Chrna2Q91X60 512 aa22.02■■□□□ 1.12
Gm28979-201ENSMUST00000190949 ArsiQ32KI9 573 aa21.94■■□□□ 1.1
Gm28979-201ENSMUST00000190949 Rsph4aQ8BYM7 716 aa21.88■■□□□ 1.09
Gm28979-201ENSMUST00000190949 Rimbp2Q80U40 1072 aa21.65■■□□□ 1.06
Gm28979-201ENSMUST00000190949 Dnajc5bQ9CQ94 199 aa21.31■■□□□ 1
Gm28979-201ENSMUST00000190949 Akt1s1Q9D1F4 257 aa21.31■■□□□ 1
Gm28979-201ENSMUST00000190949 Ppargc1bQ8VHJ7 1014 aa21.3■■□□□ 1
Gm28979-201ENSMUST00000190949 Atf5O70191 283 aa21.21■□□□□ 0.99
Gm28979-201ENSMUST00000190949 Slc34a2Q9DBP0 697 aa20.93■□□□□ 0.94
Gm28979-201ENSMUST00000190949 Ppp4r2Q0VGB7 417 aa20.88■□□□□ 0.93
Gm28979-201ENSMUST00000190949 Hs6st3Q9QYK4 470 aa20.84■□□□□ 0.93
Gm28979-201ENSMUST00000190949 Slc4a1apE9PX68 744 aa20.8■□□□□ 0.92
Gm28979-201ENSMUST00000190949 Bach1P97302 739 aa20.41■□□□□ 0.86
Gm28979-201ENSMUST00000190949 Sox12Q04890 314 aa20.17■□□□□ 0.82
Gm28979-201ENSMUST00000190949 1700123L14RikQ3V2K7 440 aa20.17■□□□□ 0.82
Gm28979-201ENSMUST00000190949 GapdhsQ64467 440 aa19.87■□□□□ 0.77
Gm28979-201ENSMUST00000190949 WdpcpQ8C456 722 aa19.76■□□□□ 0.75
Gm28979-201ENSMUST00000190949 Znf704Q9ERQ3 566 aa19.69■□□□□ 0.74
Gm28979-201ENSMUST00000190949 Slc4a5E9Q3M5 1116 aa19.59■□□□□ 0.73
Gm28979-201ENSMUST00000190949 Egfem1Q8C088 590 aa19.35■□□□□ 0.69
Gm28979-201ENSMUST00000190949 Zbtb7aO88939 569 aaKnown RBP19.31■□□□□ 0.68
Gm28979-201ENSMUST00000190949 Grwd1Q810D6 446 aaKnown RBP19.27■□□□□ 0.68
Gm28979-201ENSMUST00000190949 G430095P16RikE9Q913 147 aa19.18■□□□□ 0.66
Gm28979-201ENSMUST00000190949 Ifnlr1Q8CGK5 535 aa19.18■□□□□ 0.66
Gm28979-201ENSMUST00000190949 C1qtnf12Q8R2Z0 308 aa19.14■□□□□ 0.65
Gm28979-201ENSMUST00000190949 Abcb7Q61102 752 aaKnown RBP18.99■□□□□ 0.63
Gm28979-201ENSMUST00000190949 Gm35339A0A140LHH9 1649 aa18.95■□□□□ 0.62
Gm28979-201ENSMUST00000190949 Cdca7Q9D0M2 382 aa18.93■□□□□ 0.62
Gm28979-201ENSMUST00000190949 Ms4a5Q810P8 197 aa18.81■□□□□ 0.6
Gm28979-201ENSMUST00000190949 Rnf216P58283 853 aa18.75■□□□□ 0.59
Gm28979-201ENSMUST00000190949 Nlrp6Q91WS2 869 aa18.75■□□□□ 0.59
Gm28979-201ENSMUST00000190949 Zbtb12Q9Z150 459 aa18.69■□□□□ 0.58
Gm28979-201ENSMUST00000190949 Fam71e1A1L3C1 212 aa18.65■□□□□ 0.58
Gm28979-201ENSMUST00000190949 Gtpbp6Q3U6U5 514 aa18.63■□□□□ 0.57
Gm28979-201ENSMUST00000190949 Nkx1-1G3UXB3 402 aa18.61■□□□□ 0.57
Gm28979-201ENSMUST00000190949 NischQ80TM9 1593 aa18.61■□□□□ 0.57
Gm28979-201ENSMUST00000190949 Riok3Q9DBU3 519 aaKnown RBP18.58■□□□□ 0.56
Gm28979-201ENSMUST00000190949 Trim41Q5NCC3 630 aa18.42■□□□□ 0.54
Gm28979-201ENSMUST00000190949 Znf703P0CL69 594 aa18.36■□□□□ 0.53
Gm28979-201ENSMUST00000190949 Cacnb1Q8R3Z5 597 aa18.36■□□□□ 0.53
Gm28979-201ENSMUST00000190949 Npm2Q80W85 207 aa18.33■□□□□ 0.52
Gm28979-201ENSMUST00000190949 MyclP10166 368 aa18.32■□□□□ 0.52
Gm28979-201ENSMUST00000190949 Ildr2B5TVM2 661 aa18.3■□□□□ 0.52
Gm28979-201ENSMUST00000190949 Prr29B1ARI9 187 aa18.23■□□□□ 0.51
Gm28979-201ENSMUST00000190949 Kcnn1Q9EQR3 537 aa18.23■□□□□ 0.51
Gm28979-201ENSMUST00000190949 Pde4cQ3UEI1 686 aa18.22■□□□□ 0.51
Gm28979-201ENSMUST00000190949 AcrbpQ3V140 540 aa18.21■□□□□ 0.51
Gm28979-201ENSMUST00000190949 Fbln2P37889 1221 aa18.09■□□□□ 0.49
Gm28979-201ENSMUST00000190949 Abcc8B2RUS7 1588 aa18.08■□□□□ 0.48
Gm28979-201ENSMUST00000190949 Abcc9P70170 1546 aa18.03■□□□□ 0.48
Gm28979-201ENSMUST00000190949 Prm3Q62100 101 aa17.95■□□□□ 0.46
Gm28979-201ENSMUST00000190949 Npm3Q9CPP0 175 aaKnown RBP17.92■□□□□ 0.46
Gm28979-201ENSMUST00000190949 Pitpnm1O35954 1243 aa17.89■□□□□ 0.45
Gm28979-201ENSMUST00000190949 Pip4p2Q9CZX7 257 aa17.87■□□□□ 0.45
Gm28979-201ENSMUST00000190949 Styxl1Q9DAR2 321 aa17.83■□□□□ 0.45
Gm28979-201ENSMUST00000190949 MpndQ3TV65 487 aa17.82■□□□□ 0.44
Gm28979-201ENSMUST00000190949 Kank3Q9Z1P7 791 aa17.79■□□□□ 0.44
Gm28979-201ENSMUST00000190949 Trim35Q8C006 501 aa17.78■□□□□ 0.44
Gm28979-201ENSMUST00000190949 ScribQ80U72 1612 aa17.66■□□□□ 0.42
Gm28979-201ENSMUST00000190949 Tshz2Q68FE9 1030 aa17.65■□□□□ 0.42
Gm28979-201ENSMUST00000190949 Skida1Q80YR3 822 aa17.64■□□□□ 0.41
Gm28979-201ENSMUST00000190949 Clcn6O35454 870 aa17.62■□□□□ 0.41
Gm28979-201ENSMUST00000190949 Rtn4Q99P72 1162 aaKnown RBP17.58■□□□□ 0.41
Gm28979-201ENSMUST00000190949 Ube2uB1AUC4 352 aa17.39■□□□□ 0.37
Gm28979-201ENSMUST00000190949 Ppp1r37Q8BKR5 712 aa17.26■□□□□ 0.35
Gm28979-201ENSMUST00000190949 Cadps2Q8BYR5 1297 aa17.26■□□□□ 0.35
Gm28979-201ENSMUST00000190949 Nyap1Q6PFX7 833 aa17.21■□□□□ 0.34
Gm28979-201ENSMUST00000190949 Jarid2Q62315 1234 aa17.18■□□□□ 0.34
Gm28979-201ENSMUST00000190949 Lrrc43Q3V0L5 667 aa17.16■□□□□ 0.34
Gm28979-201ENSMUST00000190949 Tcf3P15806 651 aa17.13■□□□□ 0.33
Gm28979-201ENSMUST00000190949 Kdm5dQ62240 1548 aa16.98■□□□□ 0.31
Gm28979-201ENSMUST00000190949 NacadQ5SWP3 1504 aa16.96■□□□□ 0.31
Gm28979-201ENSMUST00000190949 Dok7Q18PE0 504 aa16.96■□□□□ 0.3
Gm28979-201ENSMUST00000190949 SnphQ80U23 495 aa16.94■□□□□ 0.3
Gm28979-201ENSMUST00000190949 Foxp4Q9DBY0 795 aaKnown RBP16.92■□□□□ 0.3
Gm28979-201ENSMUST00000190949 ArntlQ9WTL8 632 aa16.79■□□□□ 0.28
Gm28979-201ENSMUST00000190949 Sra1Q80VJ2 232 aa16.77■□□□□ 0.28
Gm28979-201ENSMUST00000190949 Hnrnpul2Q00PI9 745 aaKnown RBP16.69■□□□□ 0.26
Gm28979-201ENSMUST00000190949 Sycp2Q9CUU3 1500 aa16.67■□□□□ 0.26
Gm28979-201ENSMUST00000190949 BicraF8VPZ9 1578 aa16.55■□□□□ 0.24
Gm28979-201ENSMUST00000190949 Dcaf1Q80TR8 1506 aa16.53■□□□□ 0.24
Gm28979-201ENSMUST00000190949 Zranb1Q7M760 708 aa16.48■□□□□ 0.23
Gm28979-201ENSMUST00000190949 CrebzfQ91ZR3 358 aa16.46■□□□□ 0.23
Gm28979-201ENSMUST00000190949 Pde4dQ01063 747 aa16.45■□□□□ 0.22
Gm28979-201ENSMUST00000190949 PygbQ8CI94 843 aaKnown RBP16.43■□□□□ 0.22
Gm28979-201ENSMUST00000190949 MycnP03966 462 aaKnown RBP16.42■□□□□ 0.22
Gm28979-201ENSMUST00000190949 Map3k10Q66L42 940 aa16.41■□□□□ 0.22
Gm28979-201ENSMUST00000190949 Gjc2Q8BQU6 440 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms