RNA–Protein interactions for RNA: ENSMUST00000189821.6

Fn1-216, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-216ENSMUST00000189821 Rhox8Q6VSS7 320 aa21.58■■□□□ 1.05
Fn1-216ENSMUST00000189821 Ube2uB1AUC4 352 aa19.85■□□□□ 0.77
Fn1-216ENSMUST00000189821 Zeb1Q64318 1117 aa19.57■□□□□ 0.72
Fn1-216ENSMUST00000189821 Esf1Q3V1V3 845 aaKnown RBP19.51■□□□□ 0.71
Fn1-216ENSMUST00000189821 Ehmt2Q9Z148 1263 aaKnown RBP19.25■□□□□ 0.67
Fn1-216ENSMUST00000189821 Cngb1E1AZ71 1325 aa19.25■□□□□ 0.67
Fn1-216ENSMUST00000189821 Wdr66E9Q743 1299 aa19.07■□□□□ 0.64
Fn1-216ENSMUST00000189821 Npm2Q80W85 207 aa19.03■□□□□ 0.64
Fn1-216ENSMUST00000189821 Pelp1Q9DBD5 1123 aaKnown RBP18.98■□□□□ 0.63
Fn1-216ENSMUST00000189821 Ccdc136Q3TVA9 1136 aa18.87■□□□□ 0.61
Fn1-216ENSMUST00000189821 Myt1lP97500 1187 aa18.79■□□□□ 0.6
Fn1-216ENSMUST00000189821 Las1lA2BE28 776 aaKnown RBP18.78■□□□□ 0.6
Fn1-216ENSMUST00000189821 Gab3Q8BSM5 595 aa18.76■□□□□ 0.59
Fn1-216ENSMUST00000189821 Amer1Q7TS75 1132 aa18.67■□□□□ 0.58
Fn1-216ENSMUST00000189821 Plppr3Q7TPB0 716 aa18.5■□□□□ 0.55
Fn1-216ENSMUST00000189821 Rpgrip1Q9EPQ2 1331 aa18.46■□□□□ 0.55
Fn1-216ENSMUST00000189821 Slc24a1Q91WD8 1130 aa18.44■□□□□ 0.54
Fn1-216ENSMUST00000189821 Il27Q8K3I6 234 aa18.41■□□□□ 0.54
Fn1-216ENSMUST00000189821 Os9Q8K2C7 672 aa18.31■□□□□ 0.52
Fn1-216ENSMUST00000189821 Ifnlr1Q8CGK5 535 aa18.26■□□□□ 0.51
Fn1-216ENSMUST00000189821 Gm13697A2AK42 830 aa18.22■□□□□ 0.51
Fn1-216ENSMUST00000189821 HrcG5E8J6 738 aa18.15■□□□□ 0.5
Fn1-216ENSMUST00000189821 Ttbk1Q6PCN3 1308 aa18.11■□□□□ 0.49
Fn1-216ENSMUST00000189821 4930567H17RikQ3V0K5 233 aa18.08■□□□□ 0.48
Fn1-216ENSMUST00000189821 Chic1Q8CBW7 227 aa18.06■□□□□ 0.48
Fn1-216ENSMUST00000189821 Neurod1Q60867 357 aa17.97■□□□□ 0.47
Fn1-216ENSMUST00000189821 Trim41Q5NCC3 630 aa17.97■□□□□ 0.47
Fn1-216ENSMUST00000189821 Zbtb7cQ8VCZ7 619 aa17.96■□□□□ 0.47
Fn1-216ENSMUST00000189821 Ap3b1Q9Z1T1 1105 aa17.88■□□□□ 0.45
Fn1-216ENSMUST00000189821 UbtfP25976 765 aaKnown RBP17.86■□□□□ 0.45
Fn1-216ENSMUST00000189821 DiexfQ8BTT6 772 aaKnown RBP17.79■□□□□ 0.44
Fn1-216ENSMUST00000189821 Atp1b4Q99ME6 356 aa17.77■□□□□ 0.44
Fn1-216ENSMUST00000189821 Gm13695A2AK44 830 aa17.74■□□□□ 0.43
Fn1-216ENSMUST00000189821 Hnrnpul2Q00PI9 745 aaKnown RBP17.63■□□□□ 0.41
Fn1-216ENSMUST00000189821 Anp32bQ9EST5 272 aaKnown RBP17.6■□□□□ 0.41
Fn1-216ENSMUST00000189821 Fam50aQ9WV03 339 aaKnown RBP17.58■□□□□ 0.41
Fn1-216ENSMUST00000189821 4933416C03RikQ3V063 378 aa17.58■□□□□ 0.4
Fn1-216ENSMUST00000189821 Eif5bQ05D44 1216 aaKnown RBP17.56■□□□□ 0.4
Fn1-216ENSMUST00000189821 NeflP08551 543 aa17.5■□□□□ 0.39
Fn1-216ENSMUST00000189821 Stra8P70278 393 aa17.5■□□□□ 0.39
Fn1-216ENSMUST00000189821 NrdcQ8BHG1 1161 aa17.49■□□□□ 0.39
Fn1-216ENSMUST00000189821 Erich6D3Z6S9 713 aa17.49■□□□□ 0.39
Fn1-216ENSMUST00000189821 Prdm10Q3UTQ7 1184 aa17.48■□□□□ 0.39
Fn1-216ENSMUST00000189821 Safb2Q80YR5 991 aaKnown RBP17.47■□□□□ 0.39
Fn1-216ENSMUST00000189821 Cdk11bP24788 784 aaKnown RBP17.47■□□□□ 0.39
Fn1-216ENSMUST00000189821 Fkbp15Q6P9Q6 1216 aaKnown RBP17.44■□□□□ 0.38
Fn1-216ENSMUST00000189821 NclP09405 707 aaKnown RBP17.43■□□□□ 0.38
Fn1-216ENSMUST00000189821 Zbtb4Q5F293 982 aa17.41■□□□□ 0.38
Fn1-216ENSMUST00000189821 Gm35339A0A140LHH9 1649 aa17.35■□□□□ 0.37
Fn1-216ENSMUST00000189821 Acin1Q9JIX8 1338 aaKnown RBP17.27■□□□□ 0.36
Fn1-216ENSMUST00000189821 CenpbP27790 599 aa17.24■□□□□ 0.35
Fn1-216ENSMUST00000189821 Npm1Q61937 292 aaKnown RBP17.23■□□□□ 0.35
Fn1-216ENSMUST00000189821 Polr3glQ8R0C0 218 aa17.22■□□□□ 0.35
Fn1-216ENSMUST00000189821 Abcc9P70170 1546 aa17.16■□□□□ 0.34
Fn1-216ENSMUST00000189821 Hdac5Q9Z2V6 1113 aa17.14■□□□□ 0.33
Fn1-216ENSMUST00000189821 Rangap1P46061 589 aaKnown RBP17.13■□□□□ 0.33
Fn1-216ENSMUST00000189821 Nlrp6Q91WS2 869 aa17.1■□□□□ 0.33
Fn1-216ENSMUST00000189821 Lmod2Q3UHZ5 550 aa17.1■□□□□ 0.33
Fn1-216ENSMUST00000189821 Ppargc1bQ8VHJ7 1014 aa17.08■□□□□ 0.33
Fn1-216ENSMUST00000189821 MyclP10166 368 aa17.08■□□□□ 0.32
Fn1-216ENSMUST00000189821 P3h3Q8CG70 732 aa17.01■□□□□ 0.31
Fn1-216ENSMUST00000189821 ArxO35085 564 aa16.98■□□□□ 0.31
Fn1-216ENSMUST00000189821 NefmP08553 848 aa16.96■□□□□ 0.31
Fn1-216ENSMUST00000189821 Znf326O88291 580 aa16.94■□□□□ 0.3
Fn1-216ENSMUST00000189821 Irx6Q9ER75 438 aa16.88■□□□□ 0.29
Fn1-216ENSMUST00000189821 CatipB9EKE5 520 aa16.88■□□□□ 0.29
Fn1-216ENSMUST00000189821 Ythdc1E9Q5K9 736 aaKnown RBP16.88■□□□□ 0.29
Fn1-216ENSMUST00000189821 Ggt6Q6PDE7 497 aa16.85■□□□□ 0.29
Fn1-216ENSMUST00000189821 Hsp90aa1P07901 733 aaKnown RBP16.81■□□□□ 0.28
Fn1-216ENSMUST00000189821 Zcchc6Q5BLK4 1491 aaKnown RBP16.8■□□□□ 0.28
Fn1-216ENSMUST00000189821 Clstn1Q9EPL2 979 aa16.76■□□□□ 0.27
Fn1-216ENSMUST00000189821 Ecm2Q5FW85 670 aa16.75■□□□□ 0.27
Fn1-216ENSMUST00000189821 Rtn4Q99P72 1162 aaKnown RBP16.74■□□□□ 0.27
Fn1-216ENSMUST00000189821 Ubap1lG3UW59 384 aa16.66■□□□□ 0.26
Fn1-216ENSMUST00000189821 Slc4a1apE9PX68 744 aa16.64■□□□□ 0.25
Fn1-216ENSMUST00000189821 Ppm1fQ8CGA0 452 aa16.64■□□□□ 0.25
Fn1-216ENSMUST00000189821 MlecQ6ZQI3 291 aaKnown RBP16.62■□□□□ 0.25
Fn1-216ENSMUST00000189821 Vsig10D3YX43 558 aa16.61■□□□□ 0.25
Fn1-216ENSMUST00000189821 Ubl4bQ9CQ84 188 aa16.61■□□□□ 0.25
Fn1-216ENSMUST00000189821 Q8BT18 775 aa16.58■□□□□ 0.24
Fn1-216ENSMUST00000189821 NgefQ8CHT1 710 aa16.56■□□□□ 0.24
Fn1-216ENSMUST00000189821 Lmod3E9QA62 571 aa16.52■□□□□ 0.23
Fn1-216ENSMUST00000189821 DaxxO35613 739 aa16.5■□□□□ 0.23
Fn1-216ENSMUST00000189821 Fgd1P52734 960 aa16.49■□□□□ 0.23
Fn1-216ENSMUST00000189821 NischQ80TM9 1593 aa16.48■□□□□ 0.23
Fn1-216ENSMUST00000189821 Ppp1r18Q8BQ30 594 aa16.47■□□□□ 0.23
Fn1-216ENSMUST00000189821 Prm3Q62100 101 aa16.45■□□□□ 0.22
Fn1-216ENSMUST00000189821 Plekhg3Q4VAC9 1341 aa16.45■□□□□ 0.22
Fn1-216ENSMUST00000189821 Tnnt3Q9QZ47 272 aa16.45■□□□□ 0.22
Fn1-216ENSMUST00000189821 Csrnp3P59055 597 aa16.42■□□□□ 0.22
Fn1-216ENSMUST00000189821 TonslQ6NZL6 1363 aa16.41■□□□□ 0.22
Fn1-216ENSMUST00000189821 Trim26Q99PN3 545 aa16.41■□□□□ 0.22
Fn1-216ENSMUST00000189821 Nop58Q6DFW4 536 aaKnown RBP16.4■□□□□ 0.22
Fn1-216ENSMUST00000189821 Upf2A2AT37 1269 aaKnown RBP16.4■□□□□ 0.22
Fn1-216ENSMUST00000189821 Mapk8ip2Q9ERE9 830 aa16.39■□□□□ 0.21
Fn1-216ENSMUST00000189821 Aplp2Q06335 707 aa16.32■□□□□ 0.2
Fn1-216ENSMUST00000189821 Myt1Q8CFC2 1127 aa16.29■□□□□ 0.2
Fn1-216ENSMUST00000189821 Rad21Q61550 635 aaKnown RBP16.28■□□□□ 0.2
Fn1-216ENSMUST00000189821 DekQ7TNV0 380 aaKnown RBP16.25■□□□□ 0.19
Fn1-216ENSMUST00000189821 Grwd1Q810D6 446 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 96.8 ms