RNA–Protein interactions for RNA: ENSMUST00000189570.6

Clasp1-214, Transcript of CLIP-associating protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clasp1, Length 5,502 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clasp1-214ENSMUST00000189570 Rhox8Q6VSS7 320 aa16.04■□□□□ 0.16
Clasp1-214ENSMUST00000189570 NischQ80TM9 1593 aa14.7□□□□□ -0.06
Clasp1-214ENSMUST00000189570 Esf1Q3V1V3 845 aaKnown RBP14.53□□□□□ -0.08
Clasp1-214ENSMUST00000189570 Ccdc136Q3TVA9 1136 aa14.25□□□□□ -0.13
Clasp1-214ENSMUST00000189570 Cngb1E1AZ71 1325 aa14.25□□□□□ -0.13
Clasp1-214ENSMUST00000189570 Zeb1Q64318 1117 aa14.17□□□□□ -0.14
Clasp1-214ENSMUST00000189570 Trim41Q5NCC3 630 aa14.17□□□□□ -0.14
Clasp1-214ENSMUST00000189570 Abcc9P70170 1546 aa14.16□□□□□ -0.14
Clasp1-214ENSMUST00000189570 Npm2Q80W85 207 aa13.99□□□□□ -0.17
Clasp1-214ENSMUST00000189570 Gm35339A0A140LHH9 1649 aa13.86□□□□□ -0.19
Clasp1-214ENSMUST00000189570 Ube2uB1AUC4 352 aa13.77□□□□□ -0.2
Clasp1-214ENSMUST00000189570 Gab3Q8BSM5 595 aa13.72□□□□□ -0.21
Clasp1-214ENSMUST00000189570 Myt1lP97500 1187 aa13.68□□□□□ -0.22
Clasp1-214ENSMUST00000189570 Il27Q8K3I6 234 aa13.68□□□□□ -0.22
Clasp1-214ENSMUST00000189570 Zcchc6Q5BLK4 1491 aaKnown RBP13.65□□□□□ -0.22
Clasp1-214ENSMUST00000189570 Abcc8B2RUS7 1588 aa13.51□□□□□ -0.25
Clasp1-214ENSMUST00000189570 Rpgrip1Q9EPQ2 1331 aa13.45□□□□□ -0.26
Clasp1-214ENSMUST00000189570 Npm1Q61937 292 aaKnown RBP13.41□□□□□ -0.26
Clasp1-214ENSMUST00000189570 Ehmt2Q9Z148 1263 aaKnown RBP13.32□□□□□ -0.28
Clasp1-214ENSMUST00000189570 Las1lA2BE28 776 aaKnown RBP13.29□□□□□ -0.28
Clasp1-214ENSMUST00000189570 Pelp1Q9DBD5 1123 aaKnown RBP13.27□□□□□ -0.28
Clasp1-214ENSMUST00000189570 Ubl4bQ9CQ84 188 aa13.16□□□□□ -0.3
Clasp1-214ENSMUST00000189570 Ttbk1Q6PCN3 1308 aa13.12□□□□□ -0.31
Clasp1-214ENSMUST00000189570 NacadQ5SWP3 1504 aa13.09□□□□□ -0.31
Clasp1-214ENSMUST00000189570 Wdr66E9Q743 1299 aa13.07□□□□□ -0.32
Clasp1-214ENSMUST00000189570 Rtl1Q7M732 1744 aa13.05□□□□□ -0.32
Clasp1-214ENSMUST00000189570 Ccdc180J3QNE4 1664 aa13.02□□□□□ -0.32
Clasp1-214ENSMUST00000189570 Ifnlr1Q8CGK5 535 aa13.02□□□□□ -0.33
Clasp1-214ENSMUST00000189570 Ap3b1Q9Z1T1 1105 aa13.02□□□□□ -0.33
Clasp1-214ENSMUST00000189570 UbtfP25976 765 aaKnown RBP13.02□□□□□ -0.33
Clasp1-214ENSMUST00000189570 Brd4Q9ESU6 1400 aaKnown RBP13.01□□□□□ -0.33
Clasp1-214ENSMUST00000189570 HrcG5E8J6 738 aa12.99□□□□□ -0.33
Clasp1-214ENSMUST00000189570 Gm13697A2AK42 830 aa12.98□□□□□ -0.33
Clasp1-214ENSMUST00000189570 Ercc6F8VPZ5 1481 aa12.97□□□□□ -0.33
Clasp1-214ENSMUST00000189570 Rb1cc1Q9ESK9 1588 aa12.94□□□□□ -0.34
Clasp1-214ENSMUST00000189570 Os9Q8K2C7 672 aa12.92□□□□□ -0.34
Clasp1-214ENSMUST00000189570 NclP09405 707 aaKnown RBP12.91□□□□□ -0.34
Clasp1-214ENSMUST00000189570 Fam50aQ9WV03 339 aaKnown RBP12.88□□□□□ -0.35
Clasp1-214ENSMUST00000189570 Plppr3Q7TPB0 716 aa12.81□□□□□ -0.36
Clasp1-214ENSMUST00000189570 Fkbp15Q6P9Q6 1216 aaKnown RBP12.79□□□□□ -0.36
Clasp1-214ENSMUST00000189570 Hnrnpul2Q00PI9 745 aaKnown RBP12.74□□□□□ -0.37
Clasp1-214ENSMUST00000189570 Pds5bQ4VA53 1446 aaKnown RBP12.73□□□□□ -0.37
Clasp1-214ENSMUST00000189570 Rsf1E9PWW9 1441 aaKnown RBP12.71□□□□□ -0.37
Clasp1-214ENSMUST00000189570 NefmP08553 848 aa12.71□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Zbtb7cQ8VCZ7 619 aa12.7□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Lmod2Q3UHZ5 550 aa12.7□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Gm13695A2AK44 830 aa12.68□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Safb2Q80YR5 991 aaKnown RBP12.68□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Anp32bQ9EST5 272 aaKnown RBP12.68□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Hdac5Q9Z2V6 1113 aa12.67□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Kif15Q6P9L6 1387 aa12.66□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Slc24a1Q91WD8 1130 aa12.65□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Kdm5dQ62240 1548 aa12.65□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Neurod1Q60867 357 aa12.65□□□□□ -0.38
Clasp1-214ENSMUST00000189570 Baz1aO88379 1555 aa12.62□□□□□ -0.39
Clasp1-214ENSMUST00000189570 Atp1b4Q99ME6 356 aa12.61□□□□□ -0.39
Clasp1-214ENSMUST00000189570 Cep164Q5DU05 1446 aa12.61□□□□□ -0.39
Clasp1-214ENSMUST00000189570 Amer1Q7TS75 1132 aa12.6□□□□□ -0.39
Clasp1-214ENSMUST00000189570 Ccdc18Q640L5 1455 aa12.6□□□□□ -0.39
Clasp1-214ENSMUST00000189570 4930567H17RikQ3V0K5 233 aa12.59□□□□□ -0.39
Clasp1-214ENSMUST00000189570 Erich6D3Z6S9 713 aa12.57□□□□□ -0.4
Clasp1-214ENSMUST00000189570 Stra8P70278 393 aa12.55□□□□□ -0.4
Clasp1-214ENSMUST00000189570 Cdk11bP24788 784 aaKnown RBP12.54□□□□□ -0.4
Clasp1-214ENSMUST00000189570 Dcaf1Q80TR8 1506 aa12.5□□□□□ -0.41
Clasp1-214ENSMUST00000189570 CenpbP27790 599 aa12.49□□□□□ -0.41
Clasp1-214ENSMUST00000189570 Plekhg3Q4VAC9 1341 aa12.45□□□□□ -0.42
Clasp1-214ENSMUST00000189570 Sycp2Q9CUU3 1500 aa12.43□□□□□ -0.42
Clasp1-214ENSMUST00000189570 Arhgap27A2AB59 869 aa12.42□□□□□ -0.42
Clasp1-214ENSMUST00000189570 Clip1Q922J3 1391 aa12.41□□□□□ -0.42
Clasp1-214ENSMUST00000189570 NrdcQ8BHG1 1161 aa12.41□□□□□ -0.42
Clasp1-214ENSMUST00000189570 Chic1Q8CBW7 227 aa12.39□□□□□ -0.43
Clasp1-214ENSMUST00000189570 Clstn2Q9ER65 966 aa12.39□□□□□ -0.43
Clasp1-214ENSMUST00000189570 Ppp1r18Q8BQ30 594 aa12.39□□□□□ -0.43
Clasp1-214ENSMUST00000189570 Myt1Q8CFC2 1127 aa12.35□□□□□ -0.43
Clasp1-214ENSMUST00000189570 Phldb1Q6PDH0 1371 aaKnown RBP12.35□□□□□ -0.43
Clasp1-214ENSMUST00000189570 Golga3P55937 1487 aa12.32□□□□□ -0.44
Clasp1-214ENSMUST00000189570 MyclP10166 368 aa12.32□□□□□ -0.44
Clasp1-214ENSMUST00000189570 Acin1Q9JIX8 1338 aaKnown RBP12.3□□□□□ -0.44
Clasp1-214ENSMUST00000189570 Atad2bE9Q166 1460 aaKnown RBP12.28□□□□□ -0.44
Clasp1-214ENSMUST00000189570 TonslQ6NZL6 1363 aa12.25□□□□□ -0.45
Clasp1-214ENSMUST00000189570 P3h3Q8CG70 732 aa12.24□□□□□ -0.45
Clasp1-214ENSMUST00000189570 Ccer2J3QPU5 274 aa12.24□□□□□ -0.45
Clasp1-214ENSMUST00000189570 AknaQ80VW7 1404 aa12.23□□□□□ -0.45
Clasp1-214ENSMUST00000189570 Setd5Q5XJV7 1441 aa12.22□□□□□ -0.45
Clasp1-214ENSMUST00000189570 BlmO88700 1416 aa12.22□□□□□ -0.45
Clasp1-214ENSMUST00000189570 DiexfQ8BTT6 772 aaKnown RBP12.21□□□□□ -0.45
Clasp1-214ENSMUST00000189570 Cux2P70298 1426 aa12.2□□□□□ -0.46
Clasp1-214ENSMUST00000189570 Zbtb4Q5F293 982 aa12.19□□□□□ -0.46
Clasp1-214ENSMUST00000189570 Pabpn1Q8CCS6 302 aaKnown RBP12.19□□□□□ -0.46
Clasp1-214ENSMUST00000189570 Nlrp6Q91WS2 869 aa12.18□□□□□ -0.46
Clasp1-214ENSMUST00000189570 Crybg2B7ZCC2 1516 aa12.17□□□□□ -0.46
Clasp1-214ENSMUST00000189570 NeflP08551 543 aa12.16□□□□□ -0.46
Clasp1-214ENSMUST00000189570 Chic2Q9D9G3 165 aa12.16□□□□□ -0.46
Clasp1-214ENSMUST00000189570 MlecQ6ZQI3 291 aaKnown RBP12.13□□□□□ -0.47
Clasp1-214ENSMUST00000189570 Prdm10Q3UTQ7 1184 aa12.1□□□□□ -0.47
Clasp1-214ENSMUST00000189570 Arid3cA6PWV5 409 aa12.1□□□□□ -0.47
Clasp1-214ENSMUST00000189570 Mier1Q5UAK0 511 aa12.09□□□□□ -0.47
Clasp1-214ENSMUST00000189570 ScribQ80U72 1612 aa12.09□□□□□ -0.47
Clasp1-214ENSMUST00000189570 Smarca4Q3TKT4 1613 aaKnown RBP12.09□□□□□ -0.47
Clasp1-214ENSMUST00000189570 Eea1Q8BL66 1411 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 1309.6 ms