RNA–Protein interactions for RNA: ENSMUST00000187993.6

Gm28962-201, mousemouse

TSL 5 BASIC

Gene Gm28962, Length 621 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28962-201ENSMUST00000187993 Chic1Q8CBW7 227 aa28.33■■■□□ 2.13
Gm28962-201ENSMUST00000187993 Mapk8ip2Q9ERE9 830 aa27.63■■■□□ 2.01
Gm28962-201ENSMUST00000187993 Phf23Q8BSN5 401 aa25.41■■□□□ 1.66
Gm28962-201ENSMUST00000187993 Plppr3Q7TPB0 716 aa24.54■■□□□ 1.52
Gm28962-201ENSMUST00000187993 Gab3Q8BSM5 595 aa24.37■■□□□ 1.49
Gm28962-201ENSMUST00000187993 Senp3Q9EP97 568 aaKnown RBP23.3■■□□□ 1.32
Gm28962-201ENSMUST00000187993 Kcna4Q61423 654 aa22.32■■□□□ 1.16
Gm28962-201ENSMUST00000187993 Trap1aP19473 224 aa20.64■□□□□ 0.89
Gm28962-201ENSMUST00000187993 Hoxd11P23813 323 aa20.55■□□□□ 0.88
Gm28962-201ENSMUST00000187993 Fam163aQ8CAA5 168 aa20.53■□□□□ 0.88
Gm28962-201ENSMUST00000187993 Dmrt2Q8BG36 561 aa19.94■□□□□ 0.78
Gm28962-201ENSMUST00000187993 Znf219Q6IQX8 726 aa19.8■□□□□ 0.76
Gm28962-201ENSMUST00000187993 Chrna2Q91X60 512 aa19.54■□□□□ 0.72
Gm28962-201ENSMUST00000187993 Ppargc1bQ8VHJ7 1014 aa19.53■□□□□ 0.72
Gm28962-201ENSMUST00000187993 Rsph4aQ8BYM7 716 aa19.38■□□□□ 0.69
Gm28962-201ENSMUST00000187993 Slc4a1apE9PX68 744 aa19.13■□□□□ 0.65
Gm28962-201ENSMUST00000187993 Rimbp2Q80U40 1072 aa19.09■□□□□ 0.65
Gm28962-201ENSMUST00000187993 ArsiQ32KI9 573 aa19.01■□□□□ 0.63
Gm28962-201ENSMUST00000187993 Dnajc5bQ9CQ94 199 aa18.95■□□□□ 0.62
Gm28962-201ENSMUST00000187993 Atf5O70191 283 aa18.93■□□□□ 0.62
Gm28962-201ENSMUST00000187993 Ppp4r2Q0VGB7 417 aa18.8■□□□□ 0.6
Gm28962-201ENSMUST00000187993 Hs6st3Q9QYK4 470 aa18.79■□□□□ 0.6
Gm28962-201ENSMUST00000187993 Akt1s1Q9D1F4 257 aa18.71■□□□□ 0.59
Gm28962-201ENSMUST00000187993 Slc34a2Q9DBP0 697 aa18.32■□□□□ 0.52
Gm28962-201ENSMUST00000187993 1700123L14RikQ3V2K7 440 aa18.29■□□□□ 0.52
Gm28962-201ENSMUST00000187993 Bach1P97302 739 aa18.13■□□□□ 0.49
Gm28962-201ENSMUST00000187993 Sox12Q04890 314 aa17.96■□□□□ 0.47
Gm28962-201ENSMUST00000187993 WdpcpQ8C456 722 aa17.66■□□□□ 0.42
Gm28962-201ENSMUST00000187993 Fam71e1A1L3C1 212 aa17.44■□□□□ 0.38
Gm28962-201ENSMUST00000187993 Cdca7Q9D0M2 382 aa17.37■□□□□ 0.37
Gm28962-201ENSMUST00000187993 C1qtnf12Q8R2Z0 308 aa17.35■□□□□ 0.37
Gm28962-201ENSMUST00000187993 Nlrp6Q91WS2 869 aa17.34■□□□□ 0.37
Gm28962-201ENSMUST00000187993 Ifnlr1Q8CGK5 535 aa17.18■□□□□ 0.34
Gm28962-201ENSMUST00000187993 G430095P16RikE9Q913 147 aa17.1■□□□□ 0.33
Gm28962-201ENSMUST00000187993 Ube2uB1AUC4 352 aa17.08■□□□□ 0.32
Gm28962-201ENSMUST00000187993 Egfem1Q8C088 590 aa17.07■□□□□ 0.32
Gm28962-201ENSMUST00000187993 Znf704Q9ERQ3 566 aa17.05■□□□□ 0.32
Gm28962-201ENSMUST00000187993 Zbtb7aO88939 569 aaKnown RBP17.03■□□□□ 0.32
Gm28962-201ENSMUST00000187993 AcrbpQ3V140 540 aa17.03■□□□□ 0.32
Gm28962-201ENSMUST00000187993 Grwd1Q810D6 446 aaKnown RBP17.02■□□□□ 0.32
Gm28962-201ENSMUST00000187993 Riok3Q9DBU3 519 aaKnown RBP16.98■□□□□ 0.31
Gm28962-201ENSMUST00000187993 Slc4a5E9Q3M5 1116 aa16.97■□□□□ 0.31
Gm28962-201ENSMUST00000187993 Npm2Q80W85 207 aa16.94■□□□□ 0.3
Gm28962-201ENSMUST00000187993 Pde4cQ3UEI1 686 aa16.92■□□□□ 0.3
Gm28962-201ENSMUST00000187993 Ms4a5Q810P8 197 aa16.87■□□□□ 0.29
Gm28962-201ENSMUST00000187993 Trim41Q5NCC3 630 aa16.85■□□□□ 0.29
Gm28962-201ENSMUST00000187993 MyclP10166 368 aa16.83■□□□□ 0.28
Gm28962-201ENSMUST00000187993 Zbtb12Q9Z150 459 aa16.8■□□□□ 0.28
Gm28962-201ENSMUST00000187993 Rnf216P58283 853 aa16.73■□□□□ 0.27
Gm28962-201ENSMUST00000187993 Prm3Q62100 101 aa16.73■□□□□ 0.27
Gm28962-201ENSMUST00000187993 Abcb7Q61102 752 aaKnown RBP16.72■□□□□ 0.27
Gm28962-201ENSMUST00000187993 Gtpbp6Q3U6U5 514 aa16.58■□□□□ 0.24
Gm28962-201ENSMUST00000187993 Rtn4Q99P72 1162 aaKnown RBP16.57■□□□□ 0.24
Gm28962-201ENSMUST00000187993 GapdhsQ64467 440 aa16.47■□□□□ 0.23
Gm28962-201ENSMUST00000187993 Styxl1Q9DAR2 321 aa16.47■□□□□ 0.23
Gm28962-201ENSMUST00000187993 Nkx1-1G3UXB3 402 aa16.45■□□□□ 0.22
Gm28962-201ENSMUST00000187993 Tshz2Q68FE9 1030 aa16.41■□□□□ 0.22
Gm28962-201ENSMUST00000187993 Fbln2P37889 1221 aa16.28■□□□□ 0.2
Gm28962-201ENSMUST00000187993 MpndQ3TV65 487 aa16.14■□□□□ 0.17
Gm28962-201ENSMUST00000187993 Npm3Q9CPP0 175 aaKnown RBP16.14■□□□□ 0.17
Gm28962-201ENSMUST00000187993 Skida1Q80YR3 822 aa15.99■□□□□ 0.15
Gm28962-201ENSMUST00000187993 Kcnn1Q9EQR3 537 aa15.91■□□□□ 0.14
Gm28962-201ENSMUST00000187993 Prr29B1ARI9 187 aa15.84■□□□□ 0.13
Gm28962-201ENSMUST00000187993 Znf703P0CL69 594 aa15.84■□□□□ 0.13
Gm28962-201ENSMUST00000187993 Tcf3P15806 651 aa15.81■□□□□ 0.12
Gm28962-201ENSMUST00000187993 Ehmt2Q9Z148 1263 aaKnown RBP15.79■□□□□ 0.12
Gm28962-201ENSMUST00000187993 Ildr2B5TVM2 661 aa15.76■□□□□ 0.11
Gm28962-201ENSMUST00000187993 Pitpnm1O35954 1243 aa15.76■□□□□ 0.11
Gm28962-201ENSMUST00000187993 Ppp1r37Q8BKR5 712 aa15.7■□□□□ 0.1
Gm28962-201ENSMUST00000187993 Cacnb1Q8R3Z5 597 aa15.66■□□□□ 0.1
Gm28962-201ENSMUST00000187993 Trim35Q8C006 501 aa15.65■□□□□ 0.1
Gm28962-201ENSMUST00000187993 Kank3Q9Z1P7 791 aa15.59■□□□□ 0.09
Gm28962-201ENSMUST00000187993 Lrrc43Q3V0L5 667 aa15.57■□□□□ 0.08
Gm28962-201ENSMUST00000187993 Pip4p2Q9CZX7 257 aa15.56■□□□□ 0.08
Gm28962-201ENSMUST00000187993 Clcn6O35454 870 aa15.53■□□□□ 0.08
Gm28962-201ENSMUST00000187993 Ecm2Q5FW85 670 aa15.53■□□□□ 0.08
Gm28962-201ENSMUST00000187993 Jarid2Q62315 1234 aa15.5■□□□□ 0.07
Gm28962-201ENSMUST00000187993 Cadps2Q8BYR5 1297 aa15.44■□□□□ 0.06
Gm28962-201ENSMUST00000187993 Nyap1Q6PFX7 833 aa15.36■□□□□ 0.05
Gm28962-201ENSMUST00000187993 Hnrnpul2Q00PI9 745 aaKnown RBP15.23■□□□□ 0.03
Gm28962-201ENSMUST00000187993 Sra1Q80VJ2 232 aa15.16■□□□□ 0.02
Gm28962-201ENSMUST00000187993 MycnP03966 462 aaKnown RBP15.14■□□□□ 0.01
Gm28962-201ENSMUST00000187993 Prdm10Q3UTQ7 1184 aa15.14■□□□□ 0.01
Gm28962-201ENSMUST00000187993 SnphQ80U23 495 aa15.12■□□□□ 0.01
Gm28962-201ENSMUST00000187993 Dok7Q18PE0 504 aa15.04■□□□□ -0
Gm28962-201ENSMUST00000187993 Hdac5Q9Z2V6 1113 aa15.01□□□□□ -0.01
Gm28962-201ENSMUST00000187993 Spock2Q9ER58 423 aa14.94□□□□□ -0.02
Gm28962-201ENSMUST00000187993 Pde4dQ01063 747 aa14.93□□□□□ -0.02
Gm28962-201ENSMUST00000187993 Fam117bQ3U3E2 584 aa14.89□□□□□ -0.03
Gm28962-201ENSMUST00000187993 Repin1Q5U4E2 545 aa14.88□□□□□ -0.03
Gm28962-201ENSMUST00000187993 Zbtb7bQ64321 544 aa14.81□□□□□ -0.04
Gm28962-201ENSMUST00000187993 Ppp6r1Q7TSI3 856 aa14.81□□□□□ -0.04
Gm28962-201ENSMUST00000187993 Gm13697A2AK42 830 aa14.8□□□□□ -0.04
Gm28962-201ENSMUST00000187993 PygbQ8CI94 843 aaKnown RBP14.8□□□□□ -0.04
Gm28962-201ENSMUST00000187993 Atad2Q8CDM1 1040 aa14.74□□□□□ -0.05
Gm28962-201ENSMUST00000187993 CrebzfQ91ZR3 358 aa14.74□□□□□ -0.05
Gm28962-201ENSMUST00000187993 Pdap1Q3UHX2 181 aaKnown RBP14.72□□□□□ -0.05
Gm28962-201ENSMUST00000187993 Foxp4Q9DBY0 795 aaKnown RBP14.69□□□□□ -0.06
Gm28962-201ENSMUST00000187993 Ferd3lQ923Z4 168 aa14.68□□□□□ -0.06
Gm28962-201ENSMUST00000187993 CatipB9EKE5 520 aa14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 157.7 ms