RNA–Protein interactions for RNA: ENSMUST00000186248.1

Gm28279-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28279, Length 1,493 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28279-201ENSMUST00000186248 Mapk8ip2Q9ERE9 830 aa23.82■■□□□ 1.4
Gm28279-201ENSMUST00000186248 Chic1Q8CBW7 227 aa23.05■■□□□ 1.28
Gm28279-201ENSMUST00000186248 Phf23Q8BSN5 401 aa20.76■□□□□ 0.91
Gm28279-201ENSMUST00000186248 Gab3Q8BSM5 595 aa19.38■□□□□ 0.69
Gm28279-201ENSMUST00000186248 Plppr3Q7TPB0 716 aa18.97■□□□□ 0.63
Gm28279-201ENSMUST00000186248 Senp3Q9EP97 568 aaKnown RBP18.55■□□□□ 0.56
Gm28279-201ENSMUST00000186248 Fam163aQ8CAA5 168 aa18.1■□□□□ 0.49
Gm28279-201ENSMUST00000186248 Kcna4Q61423 654 aa16.98■□□□□ 0.31
Gm28279-201ENSMUST00000186248 Hoxd11P23813 323 aa16.69■□□□□ 0.26
Gm28279-201ENSMUST00000186248 ArsiQ32KI9 573 aa16.35■□□□□ 0.21
Gm28279-201ENSMUST00000186248 Trap1aP19473 224 aa16.22■□□□□ 0.19
Gm28279-201ENSMUST00000186248 Znf219Q6IQX8 726 aa16.19■□□□□ 0.18
Gm28279-201ENSMUST00000186248 GapdhsQ64467 440 aa16.17■□□□□ 0.18
Gm28279-201ENSMUST00000186248 Slc34a2Q9DBP0 697 aa15.78■□□□□ 0.12
Gm28279-201ENSMUST00000186248 Chrna2Q91X60 512 aa15.53■□□□□ 0.08
Gm28279-201ENSMUST00000186248 Rsph4aQ8BYM7 716 aa15.48■□□□□ 0.07
Gm28279-201ENSMUST00000186248 Rimbp2Q80U40 1072 aa15.44■□□□□ 0.06
Gm28279-201ENSMUST00000186248 Dnajc5bQ9CQ94 199 aa15.42■□□□□ 0.06
Gm28279-201ENSMUST00000186248 Akt1s1Q9D1F4 257 aa15.4■□□□□ 0.06
Gm28279-201ENSMUST00000186248 Dmrt2Q8BG36 561 aa15.17■□□□□ 0.02
Gm28279-201ENSMUST00000186248 Ppargc1bQ8VHJ7 1014 aa14.86□□□□□ -0.03
Gm28279-201ENSMUST00000186248 Slc4a1apE9PX68 744 aa14.67□□□□□ -0.06
Gm28279-201ENSMUST00000186248 Znf704Q9ERQ3 566 aa14.66□□□□□ -0.06
Gm28279-201ENSMUST00000186248 Slc4a5E9Q3M5 1116 aa14.6□□□□□ -0.07
Gm28279-201ENSMUST00000186248 Atf5O70191 283 aa14.56□□□□□ -0.08
Gm28279-201ENSMUST00000186248 Ppp4r2Q0VGB7 417 aa14.36□□□□□ -0.11
Gm28279-201ENSMUST00000186248 Hs6st3Q9QYK4 470 aa14.35□□□□□ -0.11
Gm28279-201ENSMUST00000186248 Bach1P97302 739 aa14.24□□□□□ -0.13
Gm28279-201ENSMUST00000186248 Sox12Q04890 314 aa14.12□□□□□ -0.15
Gm28279-201ENSMUST00000186248 Cacnb1Q8R3Z5 597 aa14.1□□□□□ -0.15
Gm28279-201ENSMUST00000186248 1700123L14RikQ3V2K7 440 aa13.97□□□□□ -0.17
Gm28279-201ENSMUST00000186248 Znf703P0CL69 594 aa13.8□□□□□ -0.2
Gm28279-201ENSMUST00000186248 Ildr2B5TVM2 661 aa13.79□□□□□ -0.2
Gm28279-201ENSMUST00000186248 Egfem1Q8C088 590 aa13.77□□□□□ -0.21
Gm28279-201ENSMUST00000186248 Zbtb7aO88939 569 aaKnown RBP13.72□□□□□ -0.21
Gm28279-201ENSMUST00000186248 Grwd1Q810D6 446 aaKnown RBP13.72□□□□□ -0.21
Gm28279-201ENSMUST00000186248 WdpcpQ8C456 722 aa13.59□□□□□ -0.23
Gm28279-201ENSMUST00000186248 Abcb7Q61102 752 aaKnown RBP13.52□□□□□ -0.25
Gm28279-201ENSMUST00000186248 Prr29B1ARI9 187 aa13.48□□□□□ -0.25
Gm28279-201ENSMUST00000186248 Kcnn1Q9EQR3 537 aa13.38□□□□□ -0.27
Gm28279-201ENSMUST00000186248 Fam71e1A1L3C1 212 aa13.35□□□□□ -0.27
Gm28279-201ENSMUST00000186248 G430095P16RikE9Q913 147 aa13.3□□□□□ -0.28
Gm28279-201ENSMUST00000186248 Ifnlr1Q8CGK5 535 aa13.29□□□□□ -0.28
Gm28279-201ENSMUST00000186248 Nlrp6Q91WS2 869 aa13.27□□□□□ -0.29
Gm28279-201ENSMUST00000186248 Cdca7Q9D0M2 382 aa13.27□□□□□ -0.29
Gm28279-201ENSMUST00000186248 Gm35339A0A140LHH9 1649 aa13.24□□□□□ -0.29
Gm28279-201ENSMUST00000186248 C1qtnf12Q8R2Z0 308 aa13.22□□□□□ -0.29
Gm28279-201ENSMUST00000186248 Ube2uB1AUC4 352 aa13.21□□□□□ -0.3
Gm28279-201ENSMUST00000186248 Nkx1-1G3UXB3 402 aa13.15□□□□□ -0.3
Gm28279-201ENSMUST00000186248 Rnf216P58283 853 aa13.15□□□□□ -0.3
Gm28279-201ENSMUST00000186248 NischQ80TM9 1593 aa13.11□□□□□ -0.31
Gm28279-201ENSMUST00000186248 Pip4p2Q9CZX7 257 aa13.11□□□□□ -0.31
Gm28279-201ENSMUST00000186248 AcrbpQ3V140 540 aa13.08□□□□□ -0.32
Gm28279-201ENSMUST00000186248 Npm2Q80W85 207 aa13.03□□□□□ -0.32
Gm28279-201ENSMUST00000186248 Gtpbp6Q3U6U5 514 aa12.99□□□□□ -0.33
Gm28279-201ENSMUST00000186248 Riok3Q9DBU3 519 aaKnown RBP12.97□□□□□ -0.33
Gm28279-201ENSMUST00000186248 Trim41Q5NCC3 630 aa12.94□□□□□ -0.34
Gm28279-201ENSMUST00000186248 Pde4cQ3UEI1 686 aa12.92□□□□□ -0.34
Gm28279-201ENSMUST00000186248 Kank3Q9Z1P7 791 aa12.92□□□□□ -0.34
Gm28279-201ENSMUST00000186248 MyclP10166 368 aa12.91□□□□□ -0.34
Gm28279-201ENSMUST00000186248 Zbtb12Q9Z150 459 aa12.91□□□□□ -0.34
Gm28279-201ENSMUST00000186248 Prm3Q62100 101 aa12.88□□□□□ -0.35
Gm28279-201ENSMUST00000186248 Pitpnm1O35954 1243 aa12.78□□□□□ -0.36
Gm28279-201ENSMUST00000186248 Ms4a5Q810P8 197 aa12.78□□□□□ -0.36
Gm28279-201ENSMUST00000186248 Clcn6O35454 870 aa12.76□□□□□ -0.37
Gm28279-201ENSMUST00000186248 Rtn4Q99P72 1162 aaKnown RBP12.76□□□□□ -0.37
Gm28279-201ENSMUST00000186248 Trim35Q8C006 501 aa12.72□□□□□ -0.37
Gm28279-201ENSMUST00000186248 Abcc9P70170 1546 aa12.69□□□□□ -0.38
Gm28279-201ENSMUST00000186248 Abcc8B2RUS7 1588 aa12.66□□□□□ -0.38
Gm28279-201ENSMUST00000186248 Styxl1Q9DAR2 321 aa12.62□□□□□ -0.39
Gm28279-201ENSMUST00000186248 Tshz2Q68FE9 1030 aa12.53□□□□□ -0.4
Gm28279-201ENSMUST00000186248 Foxp4Q9DBY0 795 aaKnown RBP12.5□□□□□ -0.41
Gm28279-201ENSMUST00000186248 Evx2P49749 475 aa12.44□□□□□ -0.42
Gm28279-201ENSMUST00000186248 ArntlQ9WTL8 632 aa12.44□□□□□ -0.42
Gm28279-201ENSMUST00000186248 Fbln2P37889 1221 aa12.42□□□□□ -0.42
Gm28279-201ENSMUST00000186248 MpndQ3TV65 487 aa12.33□□□□□ -0.44
Gm28279-201ENSMUST00000186248 Npm3Q9CPP0 175 aaKnown RBP12.3□□□□□ -0.44
Gm28279-201ENSMUST00000186248 Skida1Q80YR3 822 aa12.26□□□□□ -0.45
Gm28279-201ENSMUST00000186248 Ehmt2Q9Z148 1263 aaKnown RBP12.15□□□□□ -0.46
Gm28279-201ENSMUST00000186248 ScribQ80U72 1612 aa12.15□□□□□ -0.46
Gm28279-201ENSMUST00000186248 Tcf3P15806 651 aa12.1□□□□□ -0.47
Gm28279-201ENSMUST00000186248 Dok7Q18PE0 504 aa12□□□□□ -0.49
Gm28279-201ENSMUST00000186248 Cadps2Q8BYR5 1297 aa11.96□□□□□ -0.49
Gm28279-201ENSMUST00000186248 Nyap1Q6PFX7 833 aa11.95□□□□□ -0.5
Gm28279-201ENSMUST00000186248 Ppp1r37Q8BKR5 712 aa11.95□□□□□ -0.5
Gm28279-201ENSMUST00000186248 Ecm2Q5FW85 670 aa11.93□□□□□ -0.5
Gm28279-201ENSMUST00000186248 Lrrc43Q3V0L5 667 aa11.89□□□□□ -0.51
Gm28279-201ENSMUST00000186248 Fxr2Q9WVR4 673 aaKnown RBP11.89□□□□□ -0.51
Gm28279-201ENSMUST00000186248 Krtap4-1Q3UUY3 169 aa11.87□□□□□ -0.51
Gm28279-201ENSMUST00000186248 NacadQ5SWP3 1504 aa11.84□□□□□ -0.51
Gm28279-201ENSMUST00000186248 Jarid2Q62315 1234 aa11.81□□□□□ -0.52
Gm28279-201ENSMUST00000186248 SnphQ80U23 495 aa11.8□□□□□ -0.52
Gm28279-201ENSMUST00000186248 Lhx8O35652 367 aa11.79□□□□□ -0.52
Gm28279-201ENSMUST00000186248 Kdm5dQ62240 1548 aa11.79□□□□□ -0.52
Gm28279-201ENSMUST00000186248 Map3k10Q66L42 940 aa11.73□□□□□ -0.53
Gm28279-201ENSMUST00000186248 Hnrnpul2Q00PI9 745 aaKnown RBP11.72□□□□□ -0.53
Gm28279-201ENSMUST00000186248 Dcaf1Q80TR8 1506 aa11.69□□□□□ -0.54
Gm28279-201ENSMUST00000186248 Gjc2Q8BQU6 440 aa11.69□□□□□ -0.54
Gm28279-201ENSMUST00000186248 Kiaa1522A2A7S8 1013 aa11.67□□□□□ -0.54
Gm28279-201ENSMUST00000186248 Zranb1Q7M760 708 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms