RNA–Protein interactions for RNA: ENSMUST00000179947.1

Gm3543-202, Transcript of Predicted gene 3543, mousemouse

TSL 5 BASIC

Gene Gm3543, Length 231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543-202ENSMUST00000179947 Chic1Q8CBW7 227 aa19.34■□□□□ 0.69
Gm3543-202ENSMUST00000179947 Mapk8ip2Q9ERE9 830 aa18.64■□□□□ 0.57
Gm3543-202ENSMUST00000179947 Phf23Q8BSN5 401 aa17.42■□□□□ 0.38
Gm3543-202ENSMUST00000179947 Plppr3Q7TPB0 716 aa16.97■□□□□ 0.31
Gm3543-202ENSMUST00000179947 Gab3Q8BSM5 595 aa16.73■□□□□ 0.27
Gm3543-202ENSMUST00000179947 Senp3Q9EP97 568 aaKnown RBP16.05■□□□□ 0.16
Gm3543-202ENSMUST00000179947 Kcna4Q61423 654 aa15.66■□□□□ 0.1
Gm3543-202ENSMUST00000179947 Trap1aP19473 224 aa14.18□□□□□ -0.14
Gm3543-202ENSMUST00000179947 Hoxd11P23813 323 aa14.07□□□□□ -0.16
Gm3543-202ENSMUST00000179947 Dmrt2Q8BG36 561 aa13.99□□□□□ -0.17
Gm3543-202ENSMUST00000179947 Ppargc1bQ8VHJ7 1014 aa13.91□□□□□ -0.18
Gm3543-202ENSMUST00000179947 Fam163aQ8CAA5 168 aa13.73□□□□□ -0.21
Gm3543-202ENSMUST00000179947 Slc4a1apE9PX68 744 aa13.49□□□□□ -0.25
Gm3543-202ENSMUST00000179947 Znf219Q6IQX8 726 aa13.48□□□□□ -0.25
Gm3543-202ENSMUST00000179947 Chrna2Q91X60 512 aa13.39□□□□□ -0.27
Gm3543-202ENSMUST00000179947 Rsph4aQ8BYM7 716 aa13.25□□□□□ -0.29
Gm3543-202ENSMUST00000179947 Atf5O70191 283 aa13.24□□□□□ -0.29
Gm3543-202ENSMUST00000179947 Dnajc5bQ9CQ94 199 aa13.13□□□□□ -0.31
Gm3543-202ENSMUST00000179947 Rimbp2Q80U40 1072 aa13.09□□□□□ -0.31
Gm3543-202ENSMUST00000179947 Ppp4r2Q0VGB7 417 aa13.06□□□□□ -0.32
Gm3543-202ENSMUST00000179947 Hs6st3Q9QYK4 470 aa13.05□□□□□ -0.32
Gm3543-202ENSMUST00000179947 1700123L14RikQ3V2K7 440 aa12.83□□□□□ -0.36
Gm3543-202ENSMUST00000179947 ArsiQ32KI9 573 aa12.74□□□□□ -0.37
Gm3543-202ENSMUST00000179947 Akt1s1Q9D1F4 257 aa12.72□□□□□ -0.37
Gm3543-202ENSMUST00000179947 Ube2uB1AUC4 352 aa12.65□□□□□ -0.38
Gm3543-202ENSMUST00000179947 Bach1P97302 739 aa12.55□□□□□ -0.4
Gm3543-202ENSMUST00000179947 Fam71e1A1L3C1 212 aa12.54□□□□□ -0.4
Gm3543-202ENSMUST00000179947 Slc34a2Q9DBP0 697 aa12.53□□□□□ -0.4
Gm3543-202ENSMUST00000179947 Sox12Q04890 314 aa12.33□□□□□ -0.44
Gm3543-202ENSMUST00000179947 Nlrp6Q91WS2 869 aa12.33□□□□□ -0.44
Gm3543-202ENSMUST00000179947 Cdca7Q9D0M2 382 aa12.31□□□□□ -0.44
Gm3543-202ENSMUST00000179947 WdpcpQ8C456 722 aa12.22□□□□□ -0.45
Gm3543-202ENSMUST00000179947 AcrbpQ3V140 540 aa12.18□□□□□ -0.46
Gm3543-202ENSMUST00000179947 C1qtnf12Q8R2Z0 308 aa12.14□□□□□ -0.47
Gm3543-202ENSMUST00000179947 Pde4cQ3UEI1 686 aa12.12□□□□□ -0.47
Gm3543-202ENSMUST00000179947 Riok3Q9DBU3 519 aaKnown RBP11.95□□□□□ -0.5
Gm3543-202ENSMUST00000179947 Npm2Q80W85 207 aa11.92□□□□□ -0.5
Gm3543-202ENSMUST00000179947 Prm3Q62100 101 aa11.89□□□□□ -0.51
Gm3543-202ENSMUST00000179947 MyclP10166 368 aa11.87□□□□□ -0.51
Gm3543-202ENSMUST00000179947 Rtn4Q99P72 1162 aaKnown RBP11.87□□□□□ -0.51
Gm3543-202ENSMUST00000179947 Ms4a5Q810P8 197 aa11.84□□□□□ -0.51
Gm3543-202ENSMUST00000179947 G430095P16RikE9Q913 147 aa11.8□□□□□ -0.52
Gm3543-202ENSMUST00000179947 Tshz2Q68FE9 1030 aa11.79□□□□□ -0.52
Gm3543-202ENSMUST00000179947 Ifnlr1Q8CGK5 535 aa11.78□□□□□ -0.52
Gm3543-202ENSMUST00000179947 Trim41Q5NCC3 630 aa11.75□□□□□ -0.53
Gm3543-202ENSMUST00000179947 Styxl1Q9DAR2 321 aa11.7□□□□□ -0.54
Gm3543-202ENSMUST00000179947 Zbtb7aO88939 569 aaKnown RBP11.68□□□□□ -0.54
Gm3543-202ENSMUST00000179947 Egfem1Q8C088 590 aa11.68□□□□□ -0.54
Gm3543-202ENSMUST00000179947 Ehmt2Q9Z148 1263 aaKnown RBP11.66□□□□□ -0.54
Gm3543-202ENSMUST00000179947 Grwd1Q810D6 446 aaKnown RBP11.6□□□□□ -0.55
Gm3543-202ENSMUST00000179947 Zbtb12Q9Z150 459 aa11.54□□□□□ -0.56
Gm3543-202ENSMUST00000179947 Abcb7Q61102 752 aaKnown RBP11.48□□□□□ -0.57
Gm3543-202ENSMUST00000179947 Znf704Q9ERQ3 566 aa11.46□□□□□ -0.57
Gm3543-202ENSMUST00000179947 Rnf216P58283 853 aa11.44□□□□□ -0.58
Gm3543-202ENSMUST00000179947 Gtpbp6Q3U6U5 514 aa11.43□□□□□ -0.58
Gm3543-202ENSMUST00000179947 Slc4a5E9Q3M5 1116 aa11.39□□□□□ -0.59
Gm3543-202ENSMUST00000179947 Fbln2P37889 1221 aa11.33□□□□□ -0.6
Gm3543-202ENSMUST00000179947 MpndQ3TV65 487 aa11.3□□□□□ -0.6
Gm3543-202ENSMUST00000179947 Nkx1-1G3UXB3 402 aa11.29□□□□□ -0.6
Gm3543-202ENSMUST00000179947 Ecm2Q5FW85 670 aa11.28□□□□□ -0.6
Gm3543-202ENSMUST00000179947 Npm3Q9CPP0 175 aaKnown RBP11.28□□□□□ -0.6
Gm3543-202ENSMUST00000179947 Tcf3P15806 651 aa11.23□□□□□ -0.61
Gm3543-202ENSMUST00000179947 Prdm10Q3UTQ7 1184 aa11.1□□□□□ -0.63
Gm3543-202ENSMUST00000179947 Skida1Q80YR3 822 aa11.1□□□□□ -0.63
Gm3543-202ENSMUST00000179947 Ppp1r37Q8BKR5 712 aa11.09□□□□□ -0.63
Gm3543-202ENSMUST00000179947 Lrrc43Q3V0L5 667 aa10.89□□□□□ -0.67
Gm3543-202ENSMUST00000179947 Jarid2Q62315 1234 aa10.83□□□□□ -0.68
Gm3543-202ENSMUST00000179947 Pitpnm1O35954 1243 aa10.8□□□□□ -0.68
Gm3543-202ENSMUST00000179947 Trim35Q8C006 501 aa10.73□□□□□ -0.69
Gm3543-202ENSMUST00000179947 Kcnn1Q9EQR3 537 aa10.7□□□□□ -0.7
Gm3543-202ENSMUST00000179947 MycnP03966 462 aaKnown RBP10.67□□□□□ -0.7
Gm3543-202ENSMUST00000179947 Cadps2Q8BYR5 1297 aa10.67□□□□□ -0.7
Gm3543-202ENSMUST00000179947 Prr29B1ARI9 187 aa10.64□□□□□ -0.71
Gm3543-202ENSMUST00000179947 GapdhsQ64467 440 aa10.64□□□□□ -0.71
Gm3543-202ENSMUST00000179947 Ppp6r1Q7TSI3 856 aa10.64□□□□□ -0.71
Gm3543-202ENSMUST00000179947 CatipB9EKE5 520 aa10.62□□□□□ -0.71
Gm3543-202ENSMUST00000179947 Spock2Q9ER58 423 aa10.62□□□□□ -0.71
Gm3543-202ENSMUST00000179947 Znf703P0CL69 594 aa10.61□□□□□ -0.71
Gm3543-202ENSMUST00000179947 Kank3Q9Z1P7 791 aa10.6□□□□□ -0.71
Gm3543-202ENSMUST00000179947 Nyap1Q6PFX7 833 aa10.59□□□□□ -0.71
Gm3543-202ENSMUST00000179947 Sra1Q80VJ2 232 aa10.59□□□□□ -0.71
Gm3543-202ENSMUST00000179947 Ildr2B5TVM2 661 aa10.58□□□□□ -0.72
Gm3543-202ENSMUST00000179947 Hnrnpul2Q00PI9 745 aaKnown RBP10.57□□□□□ -0.72
Gm3543-202ENSMUST00000179947 Pip4p2Q9CZX7 257 aa10.54□□□□□ -0.72
Gm3543-202ENSMUST00000179947 Hdac5Q9Z2V6 1113 aa10.53□□□□□ -0.72
Gm3543-202ENSMUST00000179947 Pde4dQ01063 747 aa10.52□□□□□ -0.73
Gm3543-202ENSMUST00000179947 Fam117bQ3U3E2 584 aa10.52□□□□□ -0.73
Gm3543-202ENSMUST00000179947 Repin1Q5U4E2 545 aa10.51□□□□□ -0.73
Gm3543-202ENSMUST00000179947 Clcn6O35454 870 aa10.47□□□□□ -0.73
Gm3543-202ENSMUST00000179947 Zbtb22Q9Z0G7 638 aa10.46□□□□□ -0.73
Gm3543-202ENSMUST00000179947 Ferd3lQ923Z4 168 aa10.45□□□□□ -0.74
Gm3543-202ENSMUST00000179947 SnphQ80U23 495 aa10.39□□□□□ -0.75
Gm3543-202ENSMUST00000179947 TimelessQ9R1X4 1197 aa10.39□□□□□ -0.75
Gm3543-202ENSMUST00000179947 Zbtb7bQ64321 544 aa10.38□□□□□ -0.75
Gm3543-202ENSMUST00000179947 Gm13697A2AK42 830 aa10.36□□□□□ -0.75
Gm3543-202ENSMUST00000179947 Cacnb1Q8R3Z5 597 aa10.36□□□□□ -0.75
Gm3543-202ENSMUST00000179947 Slc4a2P13808 1237 aaKnown RBP10.34□□□□□ -0.75
Gm3543-202ENSMUST00000179947 PygbQ8CI94 843 aaKnown RBP10.34□□□□□ -0.75
Gm3543-202ENSMUST00000179947 Atad2Q8CDM1 1040 aa10.32□□□□□ -0.76
Gm3543-202ENSMUST00000179947 Pdap1Q3UHX2 181 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms