RNA–Protein interactions for RNA: ENSMUST00000171835.8

Scn3b-203, Transcript of Sodium channel subunit beta-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn3b, Length 4,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3b-203ENSMUST00000171835 Rhox8Q6VSS7 320 aa13.02□□□□□ -0.32
Scn3b-203ENSMUST00000171835 Gm35339A0A140LHH9 1649 aa12.79□□□□□ -0.36
Scn3b-203ENSMUST00000171835 NischQ80TM9 1593 aa12.67□□□□□ -0.38
Scn3b-203ENSMUST00000171835 Abcc9P70170 1546 aa12.27□□□□□ -0.44
Scn3b-203ENSMUST00000171835 Ehmt2Q9Z148 1263 aaKnown RBP12.19□□□□□ -0.46
Scn3b-203ENSMUST00000171835 Abcc8B2RUS7 1588 aa12.08□□□□□ -0.48
Scn3b-203ENSMUST00000171835 Ccdc136Q3TVA9 1136 aa11.76□□□□□ -0.53
Scn3b-203ENSMUST00000171835 Esf1Q3V1V3 845 aaKnown RBP11.62□□□□□ -0.55
Scn3b-203ENSMUST00000171835 Trim41Q5NCC3 630 aa11.52□□□□□ -0.57
Scn3b-203ENSMUST00000171835 Gab3Q8BSM5 595 aa11.51□□□□□ -0.57
Scn3b-203ENSMUST00000171835 ScribQ80U72 1612 aa11.5□□□□□ -0.57
Scn3b-203ENSMUST00000171835 Chic1Q8CBW7 227 aa11.48□□□□□ -0.57
Scn3b-203ENSMUST00000171835 Cngb1E1AZ71 1325 aa11.46□□□□□ -0.58
Scn3b-203ENSMUST00000171835 Zeb1Q64318 1117 aa11.4□□□□□ -0.58
Scn3b-203ENSMUST00000171835 Zcchc6Q5BLK4 1491 aaKnown RBP11.39□□□□□ -0.59
Scn3b-203ENSMUST00000171835 Wdr66E9Q743 1299 aa11.31□□□□□ -0.6
Scn3b-203ENSMUST00000171835 Rpgrip1Q9EPQ2 1331 aa11.28□□□□□ -0.6
Scn3b-203ENSMUST00000171835 Dcaf1Q80TR8 1506 aa11.27□□□□□ -0.6
Scn3b-203ENSMUST00000171835 NacadQ5SWP3 1504 aa11.21□□□□□ -0.62
Scn3b-203ENSMUST00000171835 Myt1lP97500 1187 aa11.19□□□□□ -0.62
Scn3b-203ENSMUST00000171835 Npm2Q80W85 207 aa11.12□□□□□ -0.63
Scn3b-203ENSMUST00000171835 Ccdc180J3QNE4 1664 aa11.1□□□□□ -0.63
Scn3b-203ENSMUST00000171835 Kdm5dQ62240 1548 aa11.09□□□□□ -0.63
Scn3b-203ENSMUST00000171835 Ube2uB1AUC4 352 aa11.09□□□□□ -0.63
Scn3b-203ENSMUST00000171835 Rb1cc1Q9ESK9 1588 aa11.08□□□□□ -0.64
Scn3b-203ENSMUST00000171835 Il27Q8K3I6 234 aa11.07□□□□□ -0.64
Scn3b-203ENSMUST00000171835 Ppargc1bQ8VHJ7 1014 aa11.04□□□□□ -0.64
Scn3b-203ENSMUST00000171835 UbtfP25976 765 aaKnown RBP11.01□□□□□ -0.65
Scn3b-203ENSMUST00000171835 Las1lA2BE28 776 aaKnown RBP11□□□□□ -0.65
Scn3b-203ENSMUST00000171835 Rtl1Q7M732 1744 aa10.96□□□□□ -0.66
Scn3b-203ENSMUST00000171835 Acin1Q9JIX8 1338 aaKnown RBP10.92□□□□□ -0.66
Scn3b-203ENSMUST00000171835 Baz1aO88379 1555 aa10.88□□□□□ -0.67
Scn3b-203ENSMUST00000171835 Brd4Q9ESU6 1400 aaKnown RBP10.88□□□□□ -0.67
Scn3b-203ENSMUST00000171835 Mapk8ip2Q9ERE9 830 aa10.87□□□□□ -0.67
Scn3b-203ENSMUST00000171835 Npm1Q61937 292 aaKnown RBP10.86□□□□□ -0.67
Scn3b-203ENSMUST00000171835 HrcG5E8J6 738 aa10.86□□□□□ -0.67
Scn3b-203ENSMUST00000171835 Slc24a1Q91WD8 1130 aa10.85□□□□□ -0.67
Scn3b-203ENSMUST00000171835 Ubl4bQ9CQ84 188 aa10.81□□□□□ -0.68
Scn3b-203ENSMUST00000171835 Sycp2Q9CUU3 1500 aa10.81□□□□□ -0.68
Scn3b-203ENSMUST00000171835 Pcgf6Q99NA9 353 aa10.79□□□□□ -0.68
Scn3b-203ENSMUST00000171835 Crybg2B7ZCC2 1516 aa10.79□□□□□ -0.68
Scn3b-203ENSMUST00000171835 Ap3b1Q9Z1T1 1105 aa10.74□□□□□ -0.69
Scn3b-203ENSMUST00000171835 Supt5hO55201 1082 aaKnown RBP10.72□□□□□ -0.69
Scn3b-203ENSMUST00000171835 BicraF8VPZ9 1578 aa10.7□□□□□ -0.7
Scn3b-203ENSMUST00000171835 Pds5bQ4VA53 1446 aaKnown RBP10.69□□□□□ -0.7
Scn3b-203ENSMUST00000171835 Ercc6F8VPZ5 1481 aa10.67□□□□□ -0.7
Scn3b-203ENSMUST00000171835 Smarca2Q6DIC0 1577 aa10.66□□□□□ -0.7
Scn3b-203ENSMUST00000171835 Neurod1Q60867 357 aa10.61□□□□□ -0.71
Scn3b-203ENSMUST00000171835 NefmP08553 848 aa10.58□□□□□ -0.72
Scn3b-203ENSMUST00000171835 Fam50aQ9WV03 339 aaKnown RBP10.58□□□□□ -0.72
Scn3b-203ENSMUST00000171835 Kif15Q6P9L6 1387 aa10.55□□□□□ -0.72
Scn3b-203ENSMUST00000171835 Rsf1E9PWW9 1441 aaKnown RBP10.54□□□□□ -0.72
Scn3b-203ENSMUST00000171835 Gm38655A0A286YDK6 273 aa10.5□□□□□ -0.73
Scn3b-203ENSMUST00000171835 Mier1Q5UAK0 511 aa10.5□□□□□ -0.73
Scn3b-203ENSMUST00000171835 Cdk11bP24788 784 aaKnown RBP10.5□□□□□ -0.73
Scn3b-203ENSMUST00000171835 Ttbk1Q6PCN3 1308 aa10.49□□□□□ -0.73
Scn3b-203ENSMUST00000171835 Atad2bE9Q166 1460 aaKnown RBP10.49□□□□□ -0.73
Scn3b-203ENSMUST00000171835 CenpbP27790 599 aa10.48□□□□□ -0.73
Scn3b-203ENSMUST00000171835 Golga3P55937 1487 aa10.47□□□□□ -0.73
Scn3b-203ENSMUST00000171835 Nop58Q6DFW4 536 aaKnown RBP10.46□□□□□ -0.73
Scn3b-203ENSMUST00000171835 Phf23Q8BSN5 401 aa10.46□□□□□ -0.73
Scn3b-203ENSMUST00000171835 Plekhg3Q4VAC9 1341 aa10.46□□□□□ -0.74
Scn3b-203ENSMUST00000171835 Cecr2E9Q2Z1 1453 aa10.45□□□□□ -0.74
Scn3b-203ENSMUST00000171835 Eif5bQ05D44 1216 aaKnown RBP10.45□□□□□ -0.74
Scn3b-203ENSMUST00000171835 NclP09405 707 aaKnown RBP10.43□□□□□ -0.74
Scn3b-203ENSMUST00000171835 Lmod2Q3UHZ5 550 aa10.43□□□□□ -0.74
Scn3b-203ENSMUST00000171835 Zbtb7cQ8VCZ7 619 aa10.42□□□□□ -0.74
Scn3b-203ENSMUST00000171835 Eid3Q3V124 375 aa10.42□□□□□ -0.74
Scn3b-203ENSMUST00000171835 Phldb1Q6PDH0 1371 aaKnown RBP10.39□□□□□ -0.75
Scn3b-203ENSMUST00000171835 Cep164Q5DU05 1446 aa10.38□□□□□ -0.75
Scn3b-203ENSMUST00000171835 Amer1Q7TS75 1132 aa10.38□□□□□ -0.75
Scn3b-203ENSMUST00000171835 CftrP26361 1476 aa10.38□□□□□ -0.75
Scn3b-203ENSMUST00000171835 Ccdc18Q640L5 1455 aa10.38□□□□□ -0.75
Scn3b-203ENSMUST00000171835 Pelp1Q9DBD5 1123 aaKnown RBP10.38□□□□□ -0.75
Scn3b-203ENSMUST00000171835 Zbtb4Q5F293 982 aa10.36□□□□□ -0.75
Scn3b-203ENSMUST00000171835 Smarca4Q3TKT4 1613 aaKnown RBP10.36□□□□□ -0.75
Scn3b-203ENSMUST00000171835 Ifnlr1Q8CGK5 535 aa10.36□□□□□ -0.75
Scn3b-203ENSMUST00000171835 Fkbp15Q6P9Q6 1216 aaKnown RBP10.33□□□□□ -0.76
Scn3b-203ENSMUST00000171835 Sall2Q9QX96 1004 aa10.31□□□□□ -0.76
Scn3b-203ENSMUST00000171835 TonslQ6NZL6 1363 aa10.3□□□□□ -0.76
Scn3b-203ENSMUST00000171835 Cux2P70298 1426 aa10.27□□□□□ -0.77
Scn3b-203ENSMUST00000171835 Iqgap2Q3UQ44 1575 aa10.26□□□□□ -0.77
Scn3b-203ENSMUST00000171835 Synj1Q8CHC4 1574 aa10.26□□□□□ -0.77
Scn3b-203ENSMUST00000171835 Clip1Q922J3 1391 aa10.25□□□□□ -0.77
Scn3b-203ENSMUST00000171835 Fmn1Q05860 1466 aa10.22□□□□□ -0.77
Scn3b-203ENSMUST00000171835 Prdm10Q3UTQ7 1184 aa10.22□□□□□ -0.77
Scn3b-203ENSMUST00000171835 NrdcQ8BHG1 1161 aa10.22□□□□□ -0.77
Scn3b-203ENSMUST00000171835 Csrnp3P59055 597 aa10.21□□□□□ -0.78
Scn3b-203ENSMUST00000171835 Plppr3Q7TPB0 716 aa10.21□□□□□ -0.78
Scn3b-203ENSMUST00000171835 Cttnbp2B9EJA2 1648 aa10.21□□□□□ -0.78
Scn3b-203ENSMUST00000171835 Stra8P70278 393 aa10.2□□□□□ -0.78
Scn3b-203ENSMUST00000171835 Os9Q8K2C7 672 aa10.19□□□□□ -0.78
Scn3b-203ENSMUST00000171835 Ccdc88bQ4QRL3 1481 aa10.17□□□□□ -0.78
Scn3b-203ENSMUST00000171835 Arhgap27A2AB59 869 aa10.16□□□□□ -0.78
Scn3b-203ENSMUST00000171835 Top2bQ64511 1612 aa10.15□□□□□ -0.78
Scn3b-203ENSMUST00000171835 Setd5Q5XJV7 1441 aa10.14□□□□□ -0.79
Scn3b-203ENSMUST00000171835 Hnrnpul2Q00PI9 745 aaKnown RBP10.14□□□□□ -0.79
Scn3b-203ENSMUST00000171835 LrpprcQ6PB66 1392 aaKnown RBP10.1□□□□□ -0.79
Scn3b-203ENSMUST00000171835 4933416C03RikQ3V063 378 aa10.09□□□□□ -0.79
Scn3b-203ENSMUST00000171835 Dnajc5bQ9CQ94 199 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 241.4 ms