RNA–Protein interactions for RNA: ENSMUST00000166431.8

Col6a6-203, Transcript of Collagen alpha-6(VI) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col6a6, Length 7,098 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-203ENSMUST00000166431 Rhox8Q6VSS7 320 aa18.94■□□□□ 0.62
Col6a6-203ENSMUST00000166431 Ehmt2Q9Z148 1263 aaKnown RBP17.48■□□□□ 0.39
Col6a6-203ENSMUST00000166431 Ube2uB1AUC4 352 aa17.14■□□□□ 0.33
Col6a6-203ENSMUST00000166431 Wdr66E9Q743 1299 aa17.1■□□□□ 0.33
Col6a6-203ENSMUST00000166431 Cngb1E1AZ71 1325 aa17.05■□□□□ 0.32
Col6a6-203ENSMUST00000166431 Pelp1Q9DBD5 1123 aaKnown RBP16.96■□□□□ 0.31
Col6a6-203ENSMUST00000166431 Las1lA2BE28 776 aaKnown RBP16.84■□□□□ 0.29
Col6a6-203ENSMUST00000166431 Rpgrip1Q9EPQ2 1331 aa16.83■□□□□ 0.28
Col6a6-203ENSMUST00000166431 Amer1Q7TS75 1132 aa16.8■□□□□ 0.28
Col6a6-203ENSMUST00000166431 Zeb1Q64318 1117 aa16.78■□□□□ 0.28
Col6a6-203ENSMUST00000166431 Esf1Q3V1V3 845 aaKnown RBP16.77■□□□□ 0.27
Col6a6-203ENSMUST00000166431 Ccdc136Q3TVA9 1136 aa16.63■□□□□ 0.25
Col6a6-203ENSMUST00000166431 Gab3Q8BSM5 595 aa16.59■□□□□ 0.25
Col6a6-203ENSMUST00000166431 Npm2Q80W85 207 aa16.51■□□□□ 0.23
Col6a6-203ENSMUST00000166431 Myt1lP97500 1187 aa16.44■□□□□ 0.22
Col6a6-203ENSMUST00000166431 Slc24a1Q91WD8 1130 aa16.38■□□□□ 0.21
Col6a6-203ENSMUST00000166431 Ttbk1Q6PCN3 1308 aa16.19■□□□□ 0.18
Col6a6-203ENSMUST00000166431 4930567H17RikQ3V0K5 233 aa16.08■□□□□ 0.17
Col6a6-203ENSMUST00000166431 CenpbP27790 599 aa16.04■□□□□ 0.16
Col6a6-203ENSMUST00000166431 UbtfP25976 765 aaKnown RBP16.01■□□□□ 0.15
Col6a6-203ENSMUST00000166431 Trim41Q5NCC3 630 aa15.91■□□□□ 0.14
Col6a6-203ENSMUST00000166431 4933416C03RikQ3V063 378 aa15.89■□□□□ 0.13
Col6a6-203ENSMUST00000166431 Stra8P70278 393 aa15.81■□□□□ 0.12
Col6a6-203ENSMUST00000166431 Neurod1Q60867 357 aa15.8■□□□□ 0.12
Col6a6-203ENSMUST00000166431 Os9Q8K2C7 672 aa15.75■□□□□ 0.11
Col6a6-203ENSMUST00000166431 Eif5bQ05D44 1216 aaKnown RBP15.74■□□□□ 0.11
Col6a6-203ENSMUST00000166431 Il27Q8K3I6 234 aa15.71■□□□□ 0.1
Col6a6-203ENSMUST00000166431 Ap3b1Q9Z1T1 1105 aa15.62■□□□□ 0.09
Col6a6-203ENSMUST00000166431 Ppargc1bQ8VHJ7 1014 aa15.61■□□□□ 0.09
Col6a6-203ENSMUST00000166431 NrdcQ8BHG1 1161 aa15.6■□□□□ 0.09
Col6a6-203ENSMUST00000166431 NeflP08551 543 aa15.58■□□□□ 0.09
Col6a6-203ENSMUST00000166431 Fam50aQ9WV03 339 aaKnown RBP15.55■□□□□ 0.08
Col6a6-203ENSMUST00000166431 NefmP08553 848 aa15.53■□□□□ 0.08
Col6a6-203ENSMUST00000166431 Anp32bQ9EST5 272 aaKnown RBP15.52■□□□□ 0.08
Col6a6-203ENSMUST00000166431 HrcG5E8J6 738 aa15.5■□□□□ 0.07
Col6a6-203ENSMUST00000166431 Chic1Q8CBW7 227 aa15.49■□□□□ 0.07
Col6a6-203ENSMUST00000166431 NclP09405 707 aaKnown RBP15.47■□□□□ 0.07
Col6a6-203ENSMUST00000166431 Cdk11bP24788 784 aaKnown RBP15.46■□□□□ 0.07
Col6a6-203ENSMUST00000166431 Zbtb7cQ8VCZ7 619 aa15.44■□□□□ 0.06
Col6a6-203ENSMUST00000166431 Acin1Q9JIX8 1338 aaKnown RBP15.4■□□□□ 0.06
Col6a6-203ENSMUST00000166431 Gm13697A2AK42 830 aa15.27■□□□□ 0.04
Col6a6-203ENSMUST00000166431 Zbtb4Q5F293 982 aa15.25■□□□□ 0.03
Col6a6-203ENSMUST00000166431 Nop58Q6DFW4 536 aaKnown RBP15.24■□□□□ 0.03
Col6a6-203ENSMUST00000166431 Ifnlr1Q8CGK5 535 aa15.24■□□□□ 0.03
Col6a6-203ENSMUST00000166431 Prdm10Q3UTQ7 1184 aa15.22■□□□□ 0.03
Col6a6-203ENSMUST00000166431 Myt1Q8CFC2 1127 aa15.19■□□□□ 0.02
Col6a6-203ENSMUST00000166431 Tnnt3Q9QZ47 272 aa15.18■□□□□ 0.02
Col6a6-203ENSMUST00000166431 Hnrnpul2Q00PI9 745 aaKnown RBP15.17■□□□□ 0.02
Col6a6-203ENSMUST00000166431 ArxO35085 564 aa15.16■□□□□ 0.02
Col6a6-203ENSMUST00000166431 Plppr3Q7TPB0 716 aa15.16■□□□□ 0.02
Col6a6-203ENSMUST00000166431 Atp1b4Q99ME6 356 aa15.16■□□□□ 0.02
Col6a6-203ENSMUST00000166431 Polr3glQ8R0C0 218 aa15.13■□□□□ 0.01
Col6a6-203ENSMUST00000166431 DaxxO35613 739 aa15.09■□□□□ 0.01
Col6a6-203ENSMUST00000166431 Erich6D3Z6S9 713 aa15.06■□□□□ 0
Col6a6-203ENSMUST00000166431 Pcgf6Q99NA9 353 aa15.04■□□□□ -0
Col6a6-203ENSMUST00000166431 Rangap1P46061 589 aaKnown RBP15.01□□□□□ -0.01
Col6a6-203ENSMUST00000166431 DiexfQ8BTT6 772 aaKnown RBP15.01□□□□□ -0.01
Col6a6-203ENSMUST00000166431 Nlrp6Q91WS2 869 aa15□□□□□ -0.01
Col6a6-203ENSMUST00000166431 TonslQ6NZL6 1363 aa14.99□□□□□ -0.01
Col6a6-203ENSMUST00000166431 Gm13695A2AK44 830 aa14.98□□□□□ -0.01
Col6a6-203ENSMUST00000166431 CatipB9EKE5 520 aa14.98□□□□□ -0.01
Col6a6-203ENSMUST00000166431 Lmod2Q3UHZ5 550 aa14.95□□□□□ -0.02
Col6a6-203ENSMUST00000166431 Ythdc1E9Q5K9 736 aaKnown RBP14.94□□□□□ -0.02
Col6a6-203ENSMUST00000166431 Mapk8ip2Q9ERE9 830 aa14.91□□□□□ -0.02
Col6a6-203ENSMUST00000166431 Supt5hO55201 1082 aaKnown RBP14.9□□□□□ -0.02
Col6a6-203ENSMUST00000166431 Csrnp3P59055 597 aa14.86□□□□□ -0.03
Col6a6-203ENSMUST00000166431 Lmod3E9QA62 571 aa14.82□□□□□ -0.04
Col6a6-203ENSMUST00000166431 Rtl5Q5DTT4 599 aa14.8□□□□□ -0.04
Col6a6-203ENSMUST00000166431 Gm38655A0A286YDK6 273 aa14.78□□□□□ -0.04
Col6a6-203ENSMUST00000166431 Fkbp15Q6P9Q6 1216 aaKnown RBP14.77□□□□□ -0.04
Col6a6-203ENSMUST00000166431 NischQ80TM9 1593 aa14.74□□□□□ -0.05
Col6a6-203ENSMUST00000166431 Plekhg3Q4VAC9 1341 aa14.74□□□□□ -0.05
Col6a6-203ENSMUST00000166431 Vsig10D3YX43 558 aa14.72□□□□□ -0.05
Col6a6-203ENSMUST00000166431 Ccdc180J3QNE4 1664 aa14.72□□□□□ -0.05
Col6a6-203ENSMUST00000166431 Mier1Q5UAK0 511 aa14.71□□□□□ -0.05
Col6a6-203ENSMUST00000166431 Gm35339A0A140LHH9 1649 aa14.71□□□□□ -0.06
Col6a6-203ENSMUST00000166431 Hsp90aa1P07901 733 aaKnown RBP14.69□□□□□ -0.06
Col6a6-203ENSMUST00000166431 Upf2A2AT37 1269 aaKnown RBP14.68□□□□□ -0.06
Col6a6-203ENSMUST00000166431 Zcchc6Q5BLK4 1491 aaKnown RBP14.67□□□□□ -0.06
Col6a6-203ENSMUST00000166431 Anp32aO35381 247 aa14.67□□□□□ -0.06
Col6a6-203ENSMUST00000166431 Npm1Q61937 292 aaKnown RBP14.65□□□□□ -0.06
Col6a6-203ENSMUST00000166431 DekQ7TNV0 380 aaKnown RBP14.58□□□□□ -0.08
Col6a6-203ENSMUST00000166431 Irx6Q9ER75 438 aa14.58□□□□□ -0.08
Col6a6-203ENSMUST00000166431 Rad21Q61550 635 aaKnown RBP14.58□□□□□ -0.08
Col6a6-203ENSMUST00000166431 Eid3Q3V124 375 aa14.55□□□□□ -0.08
Col6a6-203ENSMUST00000166431 Trim26Q99PN3 545 aa14.51□□□□□ -0.09
Col6a6-203ENSMUST00000166431 Safb2Q80YR5 991 aaKnown RBP14.49□□□□□ -0.09
Col6a6-203ENSMUST00000166431 Abcc9P70170 1546 aa14.49□□□□□ -0.09
Col6a6-203ENSMUST00000166431 Znf326O88291 580 aa14.47□□□□□ -0.09
Col6a6-203ENSMUST00000166431 P3h3Q8CG70 732 aa14.47□□□□□ -0.09
Col6a6-203ENSMUST00000166431 Fgd1P52734 960 aa14.46□□□□□ -0.09
Col6a6-203ENSMUST00000166431 ClspnQ80YR7 1315 aa14.45□□□□□ -0.1
Col6a6-203ENSMUST00000166431 Ppp4r2Q0VGB7 417 aa14.44□□□□□ -0.1
Col6a6-203ENSMUST00000166431 Arid4bA2CG63 1314 aaKnown RBP14.43□□□□□ -0.1
Col6a6-203ENSMUST00000166431 Clstn1Q9EPL2 979 aa14.41□□□□□ -0.1
Col6a6-203ENSMUST00000166431 Rtl1Q7M732 1744 aa14.41□□□□□ -0.1
Col6a6-203ENSMUST00000166431 Rtn4Q99P72 1162 aaKnown RBP14.39□□□□□ -0.11
Col6a6-203ENSMUST00000166431 Hdac5Q9Z2V6 1113 aa14.34□□□□□ -0.11
Col6a6-203ENSMUST00000166431 Calr4Q3TQS0 420 aa14.29□□□□□ -0.12
Col6a6-203ENSMUST00000166431 Chic2Q9D9G3 165 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms