RNA–Protein interactions for RNA: ENSMUST00000118281.1

Hmgb1-ps4-201, mousemouse

BASIC

Gene Hmgb1-ps4, Length 635 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps4-201ENSMUST00000118281 Chic1Q8CBW7 227 aa15.45■□□□□ 0.06
Hmgb1-ps4-201ENSMUST00000118281 Mapk8ip2Q9ERE9 830 aa14.79□□□□□ -0.04
Hmgb1-ps4-201ENSMUST00000118281 Phf23Q8BSN5 401 aa14□□□□□ -0.17
Hmgb1-ps4-201ENSMUST00000118281 Plppr3Q7TPB0 716 aa13.67□□□□□ -0.22
Hmgb1-ps4-201ENSMUST00000118281 Gab3Q8BSM5 595 aa13.42□□□□□ -0.26
Hmgb1-ps4-201ENSMUST00000118281 Senp3Q9EP97 568 aaKnown RBP12.93□□□□□ -0.34
Hmgb1-ps4-201ENSMUST00000118281 Kcna4Q61423 654 aa12.76□□□□□ -0.37
Hmgb1-ps4-201ENSMUST00000118281 Ppargc1bQ8VHJ7 1014 aa11.45□□□□□ -0.58
Hmgb1-ps4-201ENSMUST00000118281 Dmrt2Q8BG36 561 aa11.4□□□□□ -0.58
Hmgb1-ps4-201ENSMUST00000118281 Trap1aP19473 224 aa11.35□□□□□ -0.59
Hmgb1-ps4-201ENSMUST00000118281 Hoxd11P23813 323 aa11.27□□□□□ -0.61
Hmgb1-ps4-201ENSMUST00000118281 Slc4a1apE9PX68 744 aa11□□□□□ -0.65
Hmgb1-ps4-201ENSMUST00000118281 Fam163aQ8CAA5 168 aa10.82□□□□□ -0.68
Hmgb1-ps4-201ENSMUST00000118281 Atf5O70191 283 aa10.77□□□□□ -0.69
Hmgb1-ps4-201ENSMUST00000118281 Znf219Q6IQX8 726 aa10.74□□□□□ -0.69
Hmgb1-ps4-201ENSMUST00000118281 Chrna2Q91X60 512 aa10.71□□□□□ -0.69
Hmgb1-ps4-201ENSMUST00000118281 Ube2uB1AUC4 352 aa10.62□□□□□ -0.71
Hmgb1-ps4-201ENSMUST00000118281 Dnajc5bQ9CQ94 199 aa10.61□□□□□ -0.71
Hmgb1-ps4-201ENSMUST00000118281 Rsph4aQ8BYM7 716 aa10.58□□□□□ -0.72
Hmgb1-ps4-201ENSMUST00000118281 Ppp4r2Q0VGB7 417 aa10.56□□□□□ -0.72
Hmgb1-ps4-201ENSMUST00000118281 Hs6st3Q9QYK4 470 aa10.55□□□□□ -0.72
Hmgb1-ps4-201ENSMUST00000118281 Rimbp2Q80U40 1072 aa10.49□□□□□ -0.73
Hmgb1-ps4-201ENSMUST00000118281 1700123L14RikQ3V2K7 440 aa10.42□□□□□ -0.74
Hmgb1-ps4-201ENSMUST00000118281 Fam71e1A1L3C1 212 aa10.37□□□□□ -0.75
Hmgb1-ps4-201ENSMUST00000118281 Akt1s1Q9D1F4 257 aa10.14□□□□□ -0.79
Hmgb1-ps4-201ENSMUST00000118281 Bach1P97302 739 aa10.12□□□□□ -0.79
Hmgb1-ps4-201ENSMUST00000118281 Nlrp6Q91WS2 869 aa10.12□□□□□ -0.79
Hmgb1-ps4-201ENSMUST00000118281 Cdca7Q9D0M2 382 aa10.08□□□□□ -0.8
Hmgb1-ps4-201ENSMUST00000118281 Slc34a2Q9DBP0 697 aa10.03□□□□□ -0.8
Hmgb1-ps4-201ENSMUST00000118281 ArsiQ32KI9 573 aa10.02□□□□□ -0.81
Hmgb1-ps4-201ENSMUST00000118281 Pde4cQ3UEI1 686 aa10.01□□□□□ -0.81
Hmgb1-ps4-201ENSMUST00000118281 AcrbpQ3V140 540 aa10.01□□□□□ -0.81
Hmgb1-ps4-201ENSMUST00000118281 C1qtnf12Q8R2Z0 308 aa9.88□□□□□ -0.83
Hmgb1-ps4-201ENSMUST00000118281 Sox12Q04890 314 aa9.87□□□□□ -0.83
Hmgb1-ps4-201ENSMUST00000118281 WdpcpQ8C456 722 aa9.86□□□□□ -0.83
Hmgb1-ps4-201ENSMUST00000118281 Ehmt2Q9Z148 1263 aaKnown RBP9.77□□□□□ -0.85
Hmgb1-ps4-201ENSMUST00000118281 Rtn4Q99P72 1162 aaKnown RBP9.76□□□□□ -0.85
Hmgb1-ps4-201ENSMUST00000118281 Tshz2Q68FE9 1030 aa9.75□□□□□ -0.85
Hmgb1-ps4-201ENSMUST00000118281 Riok3Q9DBU3 519 aaKnown RBP9.75□□□□□ -0.85
Hmgb1-ps4-201ENSMUST00000118281 Prm3Q62100 101 aa9.72□□□□□ -0.85
Hmgb1-ps4-201ENSMUST00000118281 Npm2Q80W85 207 aa9.69□□□□□ -0.86
Hmgb1-ps4-201ENSMUST00000118281 MyclP10166 368 aa9.66□□□□□ -0.86
Hmgb1-ps4-201ENSMUST00000118281 Ms4a5Q810P8 197 aa9.65□□□□□ -0.86
Hmgb1-ps4-201ENSMUST00000118281 Styxl1Q9DAR2 321 aa9.58□□□□□ -0.88
Hmgb1-ps4-201ENSMUST00000118281 Trim41Q5NCC3 630 aa9.51□□□□□ -0.89
Hmgb1-ps4-201ENSMUST00000118281 G430095P16RikE9Q913 147 aa9.47□□□□□ -0.89
Hmgb1-ps4-201ENSMUST00000118281 Ifnlr1Q8CGK5 535 aa9.4□□□□□ -0.9
Hmgb1-ps4-201ENSMUST00000118281 Ecm2Q5FW85 670 aa9.37□□□□□ -0.91
Hmgb1-ps4-201ENSMUST00000118281 Zbtb7aO88939 569 aaKnown RBP9.36□□□□□ -0.91
Hmgb1-ps4-201ENSMUST00000118281 Egfem1Q8C088 590 aa9.34□□□□□ -0.91
Hmgb1-ps4-201ENSMUST00000118281 Prdm10Q3UTQ7 1184 aa9.29□□□□□ -0.92
Hmgb1-ps4-201ENSMUST00000118281 Grwd1Q810D6 446 aaKnown RBP9.24□□□□□ -0.93
Hmgb1-ps4-201ENSMUST00000118281 Zbtb12Q9Z150 459 aa9.23□□□□□ -0.93
Hmgb1-ps4-201ENSMUST00000118281 Tcf3P15806 651 aa9.21□□□□□ -0.94
Hmgb1-ps4-201ENSMUST00000118281 Abcb7Q61102 752 aaKnown RBP9.21□□□□□ -0.94
Hmgb1-ps4-201ENSMUST00000118281 Gtpbp6Q3U6U5 514 aa9.17□□□□□ -0.94
Hmgb1-ps4-201ENSMUST00000118281 Fbln2P37889 1221 aa9.16□□□□□ -0.94
Hmgb1-ps4-201ENSMUST00000118281 MpndQ3TV65 487 aa9.16□□□□□ -0.94
Hmgb1-ps4-201ENSMUST00000118281 Npm3Q9CPP0 175 aaKnown RBP9.15□□□□□ -0.94
Hmgb1-ps4-201ENSMUST00000118281 Rnf216P58283 853 aa9.14□□□□□ -0.95
Hmgb1-ps4-201ENSMUST00000118281 Ppp1r37Q8BKR5 712 aa9.09□□□□□ -0.95
Hmgb1-ps4-201ENSMUST00000118281 Nkx1-1G3UXB3 402 aa9.04□□□□□ -0.96
Hmgb1-ps4-201ENSMUST00000118281 Znf704Q9ERQ3 566 aa9.04□□□□□ -0.96
Hmgb1-ps4-201ENSMUST00000118281 Slc4a5E9Q3M5 1116 aa8.99□□□□□ -0.97
Hmgb1-ps4-201ENSMUST00000118281 Skida1Q80YR3 822 aa8.93□□□□□ -0.98
Hmgb1-ps4-201ENSMUST00000118281 Lrrc43Q3V0L5 667 aa8.83□□□□□ -1
Hmgb1-ps4-201ENSMUST00000118281 Ppp6r1Q7TSI3 856 aa8.82□□□□□ -1
Hmgb1-ps4-201ENSMUST00000118281 CatipB9EKE5 520 aa8.81□□□□□ -1
Hmgb1-ps4-201ENSMUST00000118281 Jarid2Q62315 1234 aa8.78□□□□□ -1
Hmgb1-ps4-201ENSMUST00000118281 Spock2Q9ER58 423 aa8.71□□□□□ -1.02
Hmgb1-ps4-201ENSMUST00000118281 Prdm16A2A935 1275 aa8.7□□□□□ -1.02
Hmgb1-ps4-201ENSMUST00000118281 MycnP03966 462 aaKnown RBP8.69□□□□□ -1.02
Hmgb1-ps4-201ENSMUST00000118281 Pitpnm1O35954 1243 aa8.65□□□□□ -1.02
Hmgb1-ps4-201ENSMUST00000118281 Zbtb22Q9Z0G7 638 aa8.64□□□□□ -1.03
Hmgb1-ps4-201ENSMUST00000118281 Repin1Q5U4E2 545 aa8.61□□□□□ -1.03
Hmgb1-ps4-201ENSMUST00000118281 Sra1Q80VJ2 232 aa8.61□□□□□ -1.03
Hmgb1-ps4-201ENSMUST00000118281 Trim35Q8C006 501 aa8.6□□□□□ -1.03
Hmgb1-ps4-201ENSMUST00000118281 Fam117bQ3U3E2 584 aa8.59□□□□□ -1.03
Hmgb1-ps4-201ENSMUST00000118281 Cadps2Q8BYR5 1297 aa8.58□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 Ferd3lQ923Z4 168 aa8.58□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 Pde4dQ01063 747 aa8.57□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 Slc4a2P13808 1237 aaKnown RBP8.56□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 Skap1Q3UUV5 355 aa8.56□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 Taok2Q6ZQ29 1240 aa8.56□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 Arid3aQ62431 601 aa8.54□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 TimelessQ9R1X4 1197 aa8.54□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 Hdac5Q9Z2V6 1113 aa8.54□□□□□ -1.04
Hmgb1-ps4-201ENSMUST00000118281 Nyap1Q6PFX7 833 aa8.52□□□□□ -1.05
Hmgb1-ps4-201ENSMUST00000118281 Hnrnpul2Q00PI9 745 aaKnown RBP8.5□□□□□ -1.05
Hmgb1-ps4-201ENSMUST00000118281 Kank3Q9Z1P7 791 aa8.44□□□□□ -1.06
Hmgb1-ps4-201ENSMUST00000118281 Zbtb7bQ64321 544 aa8.43□□□□□ -1.06
Hmgb1-ps4-201ENSMUST00000118281 Kcnn1Q9EQR3 537 aa8.42□□□□□ -1.06
Hmgb1-ps4-201ENSMUST00000118281 Rgl2Q61193 778 aa8.41□□□□□ -1.06
Hmgb1-ps4-201ENSMUST00000118281 Pip4p2Q9CZX7 257 aa8.39□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Prr29B1ARI9 187 aa8.38□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Ildr2B5TVM2 661 aa8.38□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Atad2Q8CDM1 1040 aa8.38□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 PygbQ8CI94 843 aaKnown RBP8.38□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Noa1Q9JJG9 693 aaKnown RBP8.38□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Gm13697A2AK42 830 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 62.7 ms