RNA–Protein interactions for RNA: ENSMUST00000117940.1

Hmgb1-rs18-201, mousemouse

BASIC

Gene Hmgb1-rs18, Length 627 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-rs18-201ENSMUST00000117940 Chic1Q8CBW7 227 aa17.73■□□□□ 0.43
Hmgb1-rs18-201ENSMUST00000117940 Mapk8ip2Q9ERE9 830 aa17.45■□□□□ 0.38
Hmgb1-rs18-201ENSMUST00000117940 Phf23Q8BSN5 401 aa16■□□□□ 0.15
Hmgb1-rs18-201ENSMUST00000117940 Plppr3Q7TPB0 716 aa15.26■□□□□ 0.03
Hmgb1-rs18-201ENSMUST00000117940 Gab3Q8BSM5 595 aa15.19■□□□□ 0.02
Hmgb1-rs18-201ENSMUST00000117940 Senp3Q9EP97 568 aaKnown RBP14.58□□□□□ -0.08
Hmgb1-rs18-201ENSMUST00000117940 Kcna4Q61423 654 aa13.95□□□□□ -0.18
Hmgb1-rs18-201ENSMUST00000117940 Fam163aQ8CAA5 168 aa12.94□□□□□ -0.34
Hmgb1-rs18-201ENSMUST00000117940 Hoxd11P23813 323 aa12.89□□□□□ -0.35
Hmgb1-rs18-201ENSMUST00000117940 Trap1aP19473 224 aa12.8□□□□□ -0.36
Hmgb1-rs18-201ENSMUST00000117940 Dmrt2Q8BG36 561 aa12.42□□□□□ -0.42
Hmgb1-rs18-201ENSMUST00000117940 Znf219Q6IQX8 726 aa12.37□□□□□ -0.43
Hmgb1-rs18-201ENSMUST00000117940 Chrna2Q91X60 512 aa12.14□□□□□ -0.47
Hmgb1-rs18-201ENSMUST00000117940 Ppargc1bQ8VHJ7 1014 aa12.11□□□□□ -0.47
Hmgb1-rs18-201ENSMUST00000117940 Rsph4aQ8BYM7 716 aa12.03□□□□□ -0.48
Hmgb1-rs18-201ENSMUST00000117940 Rimbp2Q80U40 1072 aa11.96□□□□□ -0.49
Hmgb1-rs18-201ENSMUST00000117940 Atf5O70191 283 aa11.92□□□□□ -0.5
Hmgb1-rs18-201ENSMUST00000117940 ArsiQ32KI9 573 aa11.88□□□□□ -0.51
Hmgb1-rs18-201ENSMUST00000117940 Ube2uB1AUC4 352 aa11.74□□□□□ -0.53
Hmgb1-rs18-201ENSMUST00000117940 Slc4a1apE9PX68 744 aa11.74□□□□□ -0.53
Hmgb1-rs18-201ENSMUST00000117940 Dnajc5bQ9CQ94 199 aa11.74□□□□□ -0.53
Hmgb1-rs18-201ENSMUST00000117940 Akt1s1Q9D1F4 257 aa11.69□□□□□ -0.54
Hmgb1-rs18-201ENSMUST00000117940 Hs6st3Q9QYK4 470 aa11.65□□□□□ -0.54
Hmgb1-rs18-201ENSMUST00000117940 Ppp4r2Q0VGB7 417 aa11.6□□□□□ -0.55
Hmgb1-rs18-201ENSMUST00000117940 Slc34a2Q9DBP0 697 aa11.42□□□□□ -0.58
Hmgb1-rs18-201ENSMUST00000117940 Bach1P97302 739 aa11.37□□□□□ -0.59
Hmgb1-rs18-201ENSMUST00000117940 1700123L14RikQ3V2K7 440 aa11.29□□□□□ -0.6
Hmgb1-rs18-201ENSMUST00000117940 Sox12Q04890 314 aa11.11□□□□□ -0.63
Hmgb1-rs18-201ENSMUST00000117940 WdpcpQ8C456 722 aa10.93□□□□□ -0.66
Hmgb1-rs18-201ENSMUST00000117940 Fam71e1A1L3C1 212 aa10.81□□□□□ -0.68
Hmgb1-rs18-201ENSMUST00000117940 C1qtnf12Q8R2Z0 308 aa10.76□□□□□ -0.69
Hmgb1-rs18-201ENSMUST00000117940 Cdca7Q9D0M2 382 aa10.7□□□□□ -0.7
Hmgb1-rs18-201ENSMUST00000117940 Znf704Q9ERQ3 566 aa10.7□□□□□ -0.7
Hmgb1-rs18-201ENSMUST00000117940 Slc4a5E9Q3M5 1116 aa10.65□□□□□ -0.7
Hmgb1-rs18-201ENSMUST00000117940 Zbtb7aO88939 569 aaKnown RBP10.65□□□□□ -0.7
Hmgb1-rs18-201ENSMUST00000117940 Egfem1Q8C088 590 aa10.64□□□□□ -0.71
Hmgb1-rs18-201ENSMUST00000117940 Nlrp6Q91WS2 869 aa10.64□□□□□ -0.71
Hmgb1-rs18-201ENSMUST00000117940 Ehmt2Q9Z148 1263 aaKnown RBP10.64□□□□□ -0.71
Hmgb1-rs18-201ENSMUST00000117940 Ms4a5Q810P8 197 aa10.63□□□□□ -0.71
Hmgb1-rs18-201ENSMUST00000117940 G430095P16RikE9Q913 147 aa10.61□□□□□ -0.71
Hmgb1-rs18-201ENSMUST00000117940 Grwd1Q810D6 446 aaKnown RBP10.55□□□□□ -0.72
Hmgb1-rs18-201ENSMUST00000117940 Ifnlr1Q8CGK5 535 aa10.54□□□□□ -0.72
Hmgb1-rs18-201ENSMUST00000117940 GapdhsQ64467 440 aa10.52□□□□□ -0.73
Hmgb1-rs18-201ENSMUST00000117940 Abcb7Q61102 752 aaKnown RBP10.51□□□□□ -0.73
Hmgb1-rs18-201ENSMUST00000117940 Riok3Q9DBU3 519 aaKnown RBP10.49□□□□□ -0.73
Hmgb1-rs18-201ENSMUST00000117940 AcrbpQ3V140 540 aa10.45□□□□□ -0.74
Hmgb1-rs18-201ENSMUST00000117940 Pde4cQ3UEI1 686 aa10.43□□□□□ -0.74
Hmgb1-rs18-201ENSMUST00000117940 Zbtb12Q9Z150 459 aa10.34□□□□□ -0.75
Hmgb1-rs18-201ENSMUST00000117940 Rnf216P58283 853 aa10.32□□□□□ -0.76
Hmgb1-rs18-201ENSMUST00000117940 Trim41Q5NCC3 630 aa10.32□□□□□ -0.76
Hmgb1-rs18-201ENSMUST00000117940 Npm2Q80W85 207 aa10.31□□□□□ -0.76
Hmgb1-rs18-201ENSMUST00000117940 Rtn4Q99P72 1162 aaKnown RBP10.31□□□□□ -0.76
Hmgb1-rs18-201ENSMUST00000117940 MyclP10166 368 aa10.3□□□□□ -0.76
Hmgb1-rs18-201ENSMUST00000117940 Gtpbp6Q3U6U5 514 aa10.29□□□□□ -0.76
Hmgb1-rs18-201ENSMUST00000117940 Nkx1-1G3UXB3 402 aa10.24□□□□□ -0.77
Hmgb1-rs18-201ENSMUST00000117940 Prm3Q62100 101 aa10.16□□□□□ -0.78
Hmgb1-rs18-201ENSMUST00000117940 Tshz2Q68FE9 1030 aa10.12□□□□□ -0.79
Hmgb1-rs18-201ENSMUST00000117940 Styxl1Q9DAR2 321 aa10.11□□□□□ -0.79
Hmgb1-rs18-201ENSMUST00000117940 Fbln2P37889 1221 aa10.06□□□□□ -0.8
Hmgb1-rs18-201ENSMUST00000117940 Npm3Q9CPP0 175 aaKnown RBP10.04□□□□□ -0.8
Hmgb1-rs18-201ENSMUST00000117940 Prdm10Q3UTQ7 1184 aa9.98□□□□□ -0.81
Hmgb1-rs18-201ENSMUST00000117940 Znf703P0CL69 594 aa9.97□□□□□ -0.81
Hmgb1-rs18-201ENSMUST00000117940 MpndQ3TV65 487 aa9.97□□□□□ -0.81
Hmgb1-rs18-201ENSMUST00000117940 Ildr2B5TVM2 661 aa9.96□□□□□ -0.82
Hmgb1-rs18-201ENSMUST00000117940 Ecm2Q5FW85 670 aa9.96□□□□□ -0.82
Hmgb1-rs18-201ENSMUST00000117940 Pitpnm1O35954 1243 aa9.89□□□□□ -0.83
Hmgb1-rs18-201ENSMUST00000117940 Prr29B1ARI9 187 aa9.88□□□□□ -0.83
Hmgb1-rs18-201ENSMUST00000117940 Kcnn1Q9EQR3 537 aa9.87□□□□□ -0.83
Hmgb1-rs18-201ENSMUST00000117940 Trim35Q8C006 501 aa9.85□□□□□ -0.83
Hmgb1-rs18-201ENSMUST00000117940 Cacnb1Q8R3Z5 597 aa9.84□□□□□ -0.83
Hmgb1-rs18-201ENSMUST00000117940 Pip4p2Q9CZX7 257 aa9.8□□□□□ -0.84
Hmgb1-rs18-201ENSMUST00000117940 Kank3Q9Z1P7 791 aa9.78□□□□□ -0.84
Hmgb1-rs18-201ENSMUST00000117940 Ppp1r37Q8BKR5 712 aa9.77□□□□□ -0.85
Hmgb1-rs18-201ENSMUST00000117940 Skida1Q80YR3 822 aa9.76□□□□□ -0.85
Hmgb1-rs18-201ENSMUST00000117940 Tcf3P15806 651 aa9.74□□□□□ -0.85
Hmgb1-rs18-201ENSMUST00000117940 CatipB9EKE5 520 aa9.68□□□□□ -0.86
Hmgb1-rs18-201ENSMUST00000117940 Lrrc43Q3V0L5 667 aa9.63□□□□□ -0.87
Hmgb1-rs18-201ENSMUST00000117940 Jarid2Q62315 1234 aa9.61□□□□□ -0.87
Hmgb1-rs18-201ENSMUST00000117940 Cadps2Q8BYR5 1297 aa9.6□□□□□ -0.87
Hmgb1-rs18-201ENSMUST00000117940 Clcn6O35454 870 aa9.57□□□□□ -0.88
Hmgb1-rs18-201ENSMUST00000117940 Taok2Q6ZQ29 1240 aa9.56□□□□□ -0.88
Hmgb1-rs18-201ENSMUST00000117940 Nyap1Q6PFX7 833 aa9.55□□□□□ -0.88
Hmgb1-rs18-201ENSMUST00000117940 Arid3aQ62431 601 aa9.51□□□□□ -0.89
Hmgb1-rs18-201ENSMUST00000117940 Prdm16A2A935 1275 aa9.49□□□□□ -0.89
Hmgb1-rs18-201ENSMUST00000117940 Sra1Q80VJ2 232 aa9.43□□□□□ -0.9
Hmgb1-rs18-201ENSMUST00000117940 SnphQ80U23 495 aa9.35□□□□□ -0.91
Hmgb1-rs18-201ENSMUST00000117940 Dok7Q18PE0 504 aa9.33□□□□□ -0.92
Hmgb1-rs18-201ENSMUST00000117940 Hnrnpul2Q00PI9 745 aaKnown RBP9.28□□□□□ -0.92
Hmgb1-rs18-201ENSMUST00000117940 Repin1Q5U4E2 545 aa9.28□□□□□ -0.92
Hmgb1-rs18-201ENSMUST00000117940 MycnP03966 462 aaKnown RBP9.27□□□□□ -0.93
Hmgb1-rs18-201ENSMUST00000117940 Pde4dQ01063 747 aa9.25□□□□□ -0.93
Hmgb1-rs18-201ENSMUST00000117940 Fam117bQ3U3E2 584 aa9.23□□□□□ -0.93
Hmgb1-rs18-201ENSMUST00000117940 CrebzfQ91ZR3 358 aa9.23□□□□□ -0.93
Hmgb1-rs18-201ENSMUST00000117940 Foxp4Q9DBY0 795 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-rs18-201ENSMUST00000117940 Ppp6r1Q7TSI3 856 aa9.18□□□□□ -0.94
Hmgb1-rs18-201ENSMUST00000117940 PygbQ8CI94 843 aaKnown RBP9.18□□□□□ -0.94
Hmgb1-rs18-201ENSMUST00000117940 Zbtb7bQ64321 544 aa9.15□□□□□ -0.94
Hmgb1-rs18-201ENSMUST00000117940 Hdac5Q9Z2V6 1113 aa9.14□□□□□ -0.95
Hmgb1-rs18-201ENSMUST00000117940 ArntlQ9WTL8 632 aa9.12□□□□□ -0.95
Hmgb1-rs18-201ENSMUST00000117940 Atad2Q8CDM1 1040 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms