RNA–Protein interactions for RNA: ENSMUST00000115026.7

Cald1-204, Transcript of Caldesmon 1, mouse

TSL 5 BASIC

Gene Cald1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Cald1-204	ENSMUST00000115026	Nisch	Q80TM9	1593 aa		17.53	■□□□□ 0.4
Cald1-204	ENSMUST00000115026	Rhox8	Q6VSS7	320 aa		16.84	■□□□□ 0.29
Cald1-204	ENSMUST00000115026	Gm35339	A0A140LHH9	1649 aa		16.82	■□□□□ 0.28
Cald1-204	ENSMUST00000115026	Abcc9	P70170	1546 aa		16.7	■□□□□ 0.26
Cald1-204	ENSMUST00000115026	Abcc8	B2RUS7	1588 aa		16.62	■□□□□ 0.25
Cald1-204	ENSMUST00000115026	Rpgrip1	Q9EPQ2	1331 aa		15.81	■□□□□ 0.12
Cald1-204	ENSMUST00000115026	Nacad	Q5SWP3	1504 aa		15.71	■□□□□ 0.11
Cald1-204	ENSMUST00000115026	Rtl1	Q7M732	1744 aa		15.6	■□□□□ 0.09
Cald1-204	ENSMUST00000115026	Scrib	Q80U72	1612 aa		15.58	■□□□□ 0.08
Cald1-204	ENSMUST00000115026	Ccdc180	J3QNE4	1664 aa		15.56	■□□□□ 0.08
Cald1-204	ENSMUST00000115026	Ehmt2	Q9Z148	1263 aa	Known RBP	15.54	■□□□□ 0.08
Cald1-204	ENSMUST00000115026	Kdm5d	Q62240	1548 aa		15.5	■□□□□ 0.07
Cald1-204	ENSMUST00000115026	Zcchc6	Q5BLK4	1491 aa	Known RBP	15.44	■□□□□ 0.06
Cald1-204	ENSMUST00000115026	Ccdc136	Q3TVA9	1136 aa		15.42	■□□□□ 0.06
Cald1-204	ENSMUST00000115026	Esf1	Q3V1V3	845 aa	Known RBP	15.36	■□□□□ 0.05
Cald1-204	ENSMUST00000115026	Rb1cc1	Q9ESK9	1588 aa		15.31	■□□□□ 0.04
Cald1-204	ENSMUST00000115026	Acin1	Q9JIX8	1338 aa	Known RBP	15.3	■□□□□ 0.04
Cald1-204	ENSMUST00000115026	Dcaf1	Q80TR8	1506 aa		15.29	■□□□□ 0.04
Cald1-204	ENSMUST00000115026	Sycp2	Q9CUU3	1500 aa		15.22	■□□□□ 0.03
Cald1-204	ENSMUST00000115026	Trim41	Q5NCC3	630 aa		15.18	■□□□□ 0.02
Cald1-204	ENSMUST00000115026	Hrc	G5E8J6	738 aa		15.04	■□□□□ -0
Cald1-204	ENSMUST00000115026	Baz1a	O88379	1555 aa		15.04	■□□□□ -0
Cald1-204	ENSMUST00000115026	Cngb1	E1AZ71	1325 aa		15.03	■□□□□ -0
Cald1-204	ENSMUST00000115026	Pds5b	Q4VA53	1446 aa	Known RBP	14.96	□□□□□ -0.01
Cald1-204	ENSMUST00000115026	Pcgf6	Q99NA9	353 aa		14.89	□□□□□ -0.03
Cald1-204	ENSMUST00000115026	Ercc6	F8VPZ5	1481 aa		14.84	□□□□□ -0.03
Cald1-204	ENSMUST00000115026	Ubl4b	Q9CQ84	188 aa		14.81	□□□□□ -0.04
Cald1-204	ENSMUST00000115026	Crybg2	B7ZCC2	1516 aa		14.79	□□□□□ -0.04
Cald1-204	ENSMUST00000115026	Il27	Q8K3I6	234 aa		14.75	□□□□□ -0.05
Cald1-204	ENSMUST00000115026	Brd4	Q9ESU6	1400 aa	Known RBP	14.73	□□□□□ -0.05
Cald1-204	ENSMUST00000115026	Gab3	Q8BSM5	595 aa		14.72	□□□□□ -0.05
Cald1-204	ENSMUST00000115026	Zeb1	Q64318	1117 aa		14.7	□□□□□ -0.06
Cald1-204	ENSMUST00000115026	Atad2b	E9Q166	1460 aa	Known RBP	14.7	□□□□□ -0.06
Cald1-204	ENSMUST00000115026	Bicra	F8VPZ9	1578 aa		14.66	□□□□□ -0.06
Cald1-204	ENSMUST00000115026	Npm1	Q61937	292 aa	Known RBP	14.66	□□□□□ -0.06
Cald1-204	ENSMUST00000115026	Supt5h	O55201	1082 aa	Known RBP	14.61	□□□□□ -0.07
Cald1-204	ENSMUST00000115026	Npm2	Q80W85	207 aa		14.51	□□□□□ -0.09
Cald1-204	ENSMUST00000115026	Dnajc5b	Q9CQ94	199 aa		14.51	□□□□□ -0.09
Cald1-204	ENSMUST00000115026	Cecr2	E9Q2Z1	1453 aa		14.5	□□□□□ -0.09
Cald1-204	ENSMUST00000115026	Smarca4	Q3TKT4	1613 aa	Known RBP	14.49	□□□□□ -0.09
Cald1-204	ENSMUST00000115026	Phldb1	Q6PDH0	1371 aa	Known RBP	14.47	□□□□□ -0.09
Cald1-204	ENSMUST00000115026	Las1l	A2BE28	776 aa	Known RBP	14.46	□□□□□ -0.09
Cald1-204	ENSMUST00000115026	Nefm	P08553	848 aa		14.45	□□□□□ -0.1
Cald1-204	ENSMUST00000115026	Smarca2	Q6DIC0	1577 aa		14.43	□□□□□ -0.1
Cald1-204	ENSMUST00000115026	Wdr66	E9Q743	1299 aa		14.41	□□□□□ -0.1
Cald1-204	ENSMUST00000115026	Rsf1	E9PWW9	1441 aa	Known RBP	14.4	□□□□□ -0.1
Cald1-204	ENSMUST00000115026	Kif15	Q6P9L6	1387 aa		14.39	□□□□□ -0.11
Cald1-204	ENSMUST00000115026	Iqgap2	Q3UQ44	1575 aa		14.39	□□□□□ -0.11
Cald1-204	ENSMUST00000115026	Cep164	Q5DU05	1446 aa		14.38	□□□□□ -0.11
Cald1-204	ENSMUST00000115026	Cftr	P26361	1476 aa		14.32	□□□□□ -0.12
Cald1-204	ENSMUST00000115026	Mier1	Q5UAK0	511 aa		14.28	□□□□□ -0.12
Cald1-204	ENSMUST00000115026	Neurod1	Q60867	357 aa		14.28	□□□□□ -0.12
Cald1-204	ENSMUST00000115026	Ubtf	P25976	765 aa	Known RBP	14.26	□□□□□ -0.13
Cald1-204	ENSMUST00000115026	Chic1	Q8CBW7	227 aa		14.25	□□□□□ -0.13
Cald1-204	ENSMUST00000115026	Myt1l	P97500	1187 aa		14.25	□□□□□ -0.13
Cald1-204	ENSMUST00000115026	Cc2d2a	Q8CFW7	1633 aa		14.2	□□□□□ -0.14
Cald1-204	ENSMUST00000115026	Frmpd1	A2AKB4	1549 aa		14.18	□□□□□ -0.14
Cald1-204	ENSMUST00000115026	Synj1	Q8CHC4	1574 aa		14.18	□□□□□ -0.14
Cald1-204	ENSMUST00000115026	Cux2	P70298	1426 aa		14.17	□□□□□ -0.14
Cald1-204	ENSMUST00000115026	Ccdc18	Q640L5	1455 aa		14.16	□□□□□ -0.14
Cald1-204	ENSMUST00000115026	Cttnbp2	B9EJA2	1648 aa		14.15	□□□□□ -0.14
Cald1-204	ENSMUST00000115026	Golga3	P55937	1487 aa		14.14	□□□□□ -0.15
Cald1-204	ENSMUST00000115026	Pelp1	Q9DBD5	1123 aa	Known RBP	14.13	□□□□□ -0.15
Cald1-204	ENSMUST00000115026	Sall2	Q9QX96	1004 aa		14.12	□□□□□ -0.15
Cald1-204	ENSMUST00000115026	Wdr62	Q3U3T8	1523 aa		14.11	□□□□□ -0.15
Cald1-204	ENSMUST00000115026	Mrc2	Q64449	1479 aa		14.07	□□□□□ -0.16
Cald1-204	ENSMUST00000115026	Thoc2	B1AZI6	1594 aa	Known RBP	14.05	□□□□□ -0.16
Cald1-204	ENSMUST00000115026	Ppargc1b	Q8VHJ7	1014 aa		14.05	□□□□□ -0.16
Cald1-204	ENSMUST00000115026	Cdk11b	P24788	784 aa	Known RBP	14.04	□□□□□ -0.16
Cald1-204	ENSMUST00000115026	Nop58	Q6DFW4	536 aa	Known RBP	14	□□□□□ -0.17
Cald1-204	ENSMUST00000115026	Fam135a	Q6NS59	1506 aa		13.95	□□□□□ -0.18
Cald1-204	ENSMUST00000115026	Baz1b	Q9Z277	1479 aa		13.94	□□□□□ -0.18
Cald1-204	ENSMUST00000115026	Cenpb	P27790	599 aa		13.93	□□□□□ -0.18
Cald1-204	ENSMUST00000115026	Ttbk1	Q6PCN3	1308 aa		13.92	□□□□□ -0.18
Cald1-204	ENSMUST00000115026	Anks4b	Q8K3X6	423 aa		13.92	□□□□□ -0.18
Cald1-204	ENSMUST00000115026	Csrnp3	P59055	597 aa		13.9	□□□□□ -0.18
Cald1-204	ENSMUST00000115026	Fmn1	Q05860	1466 aa		13.89	□□□□□ -0.19
Cald1-204	ENSMUST00000115026	Ccdc88b	Q4QRL3	1481 aa		13.89	□□□□□ -0.19
Cald1-204	ENSMUST00000115026	Dhx29	Q6PGC1	1365 aa	Known RBP	13.88	□□□□□ -0.19
Cald1-204	ENSMUST00000115026	Tonsl	Q6NZL6	1363 aa		13.88	□□□□□ -0.19
Cald1-204	ENSMUST00000115026	Lrpprc	Q6PB66	1392 aa	Known RBP	13.88	□□□□□ -0.19
Cald1-204	ENSMUST00000115026	Clspn	Q80YR7	1315 aa		13.88	□□□□□ -0.19
Cald1-204	ENSMUST00000115026	Ifnlr1	Q8CGK5	535 aa		13.86	□□□□□ -0.19
Cald1-204	ENSMUST00000115026	Aebp2	Q9Z248	504 aa	Known RBP	13.83	□□□□□ -0.2
Cald1-204	ENSMUST00000115026	Fkbp15	Q6P9Q6	1216 aa	Known RBP	13.79	□□□□□ -0.2
Cald1-204	ENSMUST00000115026	Plekhg3	Q4VAC9	1341 aa		13.78	□□□□□ -0.2
Cald1-204	ENSMUST00000115026	1700123L14Rik	Q3V2K7	440 aa		13.78	□□□□□ -0.2
Cald1-204	ENSMUST00000115026	Ap3b1	Q9Z1T1	1105 aa		13.78	□□□□□ -0.2
Cald1-204	ENSMUST00000115026	Pabpn1	Q8CCS6	302 aa	Known RBP	13.77	□□□□□ -0.21
Cald1-204	ENSMUST00000115026	Urb2	E9Q7L1	1524 aa	Known RBP	13.74	□□□□□ -0.21
Cald1-204	ENSMUST00000115026	Arhgap27	A2AB59	869 aa		13.71	□□□□□ -0.21
Cald1-204	ENSMUST00000115026	Gm38655	A0A286YDK6	273 aa		13.69	□□□□□ -0.22
Cald1-204	ENSMUST00000115026	Clip1	Q922J3	1391 aa		13.66	□□□□□ -0.22
Cald1-204	ENSMUST00000115026	Aplp2	Q06335	707 aa		13.65	□□□□□ -0.22
Cald1-204	ENSMUST00000115026	Akna	Q80VW7	1404 aa		13.65	□□□□□ -0.22
Cald1-204	ENSMUST00000115026	Lamc3	Q9R0B6	1581 aa		13.64	□□□□□ -0.23
Cald1-204	ENSMUST00000115026	Myt1	Q8CFC2	1127 aa		13.64	□□□□□ -0.23
Cald1-204	ENSMUST00000115026	Plb1	Q3TTY0	1478 aa		13.63	□□□□□ -0.23
Cald1-204	ENSMUST00000115026	Eid3	Q3V124	375 aa		13.62	□□□□□ -0.23
Cald1-204	ENSMUST00000115026	Ube2u	B1AUC4	352 aa		13.62	□□□□□ -0.23

Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms