RNA–Protein interactions for RNA: ENSMUST00000113055.8

Shroom3-203, Transcript of Protein Shroom3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shroom3, Length 6,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-203ENSMUST00000113055 Rhox8Q6VSS7 320 aa26.45■■□□□ 1.82
Shroom3-203ENSMUST00000113055 Ehmt2Q9Z148 1263 aaKnown RBP24.15■■□□□ 1.46
Shroom3-203ENSMUST00000113055 Rpgrip1Q9EPQ2 1331 aa23.85■■□□□ 1.41
Shroom3-203ENSMUST00000113055 Cngb1E1AZ71 1325 aa23.75■■□□□ 1.39
Shroom3-203ENSMUST00000113055 Wdr66E9Q743 1299 aa23.68■■□□□ 1.38
Shroom3-203ENSMUST00000113055 Ube2uB1AUC4 352 aa23.63■■□□□ 1.37
Shroom3-203ENSMUST00000113055 Las1lA2BE28 776 aaKnown RBP23.51■■□□□ 1.35
Shroom3-203ENSMUST00000113055 Pelp1Q9DBD5 1123 aaKnown RBP23.5■■□□□ 1.35
Shroom3-203ENSMUST00000113055 Esf1Q3V1V3 845 aaKnown RBP23.36■■□□□ 1.33
Shroom3-203ENSMUST00000113055 Zeb1Q64318 1117 aa23.26■■□□□ 1.31
Shroom3-203ENSMUST00000113055 Ccdc136Q3TVA9 1136 aa23.24■■□□□ 1.31
Shroom3-203ENSMUST00000113055 Gab3Q8BSM5 595 aa23.1■■□□□ 1.29
Shroom3-203ENSMUST00000113055 Amer1Q7TS75 1132 aa23.09■■□□□ 1.29
Shroom3-203ENSMUST00000113055 Npm2Q80W85 207 aa22.99■■□□□ 1.27
Shroom3-203ENSMUST00000113055 Myt1lP97500 1187 aa22.84■■□□□ 1.25
Shroom3-203ENSMUST00000113055 Slc24a1Q91WD8 1130 aa22.54■■□□□ 1.2
Shroom3-203ENSMUST00000113055 Trim41Q5NCC3 630 aa22.45■■□□□ 1.18
Shroom3-203ENSMUST00000113055 CenpbP27790 599 aa22.41■■□□□ 1.18
Shroom3-203ENSMUST00000113055 UbtfP25976 765 aaKnown RBP22.29■■□□□ 1.16
Shroom3-203ENSMUST00000113055 Ttbk1Q6PCN3 1308 aa22.17■■□□□ 1.14
Shroom3-203ENSMUST00000113055 Stra8P70278 393 aa22.16■■□□□ 1.14
Shroom3-203ENSMUST00000113055 4930567H17RikQ3V0K5 233 aa22.15■■□□□ 1.14
Shroom3-203ENSMUST00000113055 NefmP08553 848 aa21.95■■□□□ 1.1
Shroom3-203ENSMUST00000113055 4933416C03RikQ3V063 378 aa21.92■■□□□ 1.1
Shroom3-203ENSMUST00000113055 Il27Q8K3I6 234 aa21.85■■□□□ 1.09
Shroom3-203ENSMUST00000113055 Acin1Q9JIX8 1338 aaKnown RBP21.84■■□□□ 1.09
Shroom3-203ENSMUST00000113055 Neurod1Q60867 357 aa21.83■■□□□ 1.09
Shroom3-203ENSMUST00000113055 Os9Q8K2C7 672 aa21.76■■□□□ 1.07
Shroom3-203ENSMUST00000113055 Eif5bQ05D44 1216 aaKnown RBP21.74■■□□□ 1.07
Shroom3-203ENSMUST00000113055 NrdcQ8BHG1 1161 aa21.73■■□□□ 1.07
Shroom3-203ENSMUST00000113055 Anp32bQ9EST5 272 aaKnown RBP21.67■■□□□ 1.06
Shroom3-203ENSMUST00000113055 Ap3b1Q9Z1T1 1105 aa21.67■■□□□ 1.06
Shroom3-203ENSMUST00000113055 Cdk11bP24788 784 aaKnown RBP21.67■■□□□ 1.06
Shroom3-203ENSMUST00000113055 NeflP08551 543 aa21.66■■□□□ 1.06
Shroom3-203ENSMUST00000113055 Fam50aQ9WV03 339 aaKnown RBP21.65■■□□□ 1.06
Shroom3-203ENSMUST00000113055 Ppargc1bQ8VHJ7 1014 aa21.56■■□□□ 1.04
Shroom3-203ENSMUST00000113055 NclP09405 707 aaKnown RBP21.56■■□□□ 1.04
Shroom3-203ENSMUST00000113055 HrcG5E8J6 738 aa21.38■■□□□ 1.01
Shroom3-203ENSMUST00000113055 Nop58Q6DFW4 536 aaKnown RBP21.37■■□□□ 1.01
Shroom3-203ENSMUST00000113055 Tnnt3Q9QZ47 272 aa21.36■■□□□ 1.01
Shroom3-203ENSMUST00000113055 Zbtb7cQ8VCZ7 619 aa21.27■□□□□ 0.99
Shroom3-203ENSMUST00000113055 NischQ80TM9 1593 aa21.23■□□□□ 0.99
Shroom3-203ENSMUST00000113055 Chic1Q8CBW7 227 aa21.21■□□□□ 0.99
Shroom3-203ENSMUST00000113055 Pcgf6Q99NA9 353 aa21.2■□□□□ 0.98
Shroom3-203ENSMUST00000113055 Gm13697A2AK42 830 aa21.09■□□□□ 0.97
Shroom3-203ENSMUST00000113055 Myt1Q8CFC2 1127 aa21.06■□□□□ 0.96
Shroom3-203ENSMUST00000113055 TonslQ6NZL6 1363 aa21.06■□□□□ 0.96
Shroom3-203ENSMUST00000113055 Hnrnpul2Q00PI9 745 aaKnown RBP21.02■□□□□ 0.96
Shroom3-203ENSMUST00000113055 Zbtb4Q5F293 982 aa21■□□□□ 0.95
Shroom3-203ENSMUST00000113055 Ifnlr1Q8CGK5 535 aa20.96■□□□□ 0.95
Shroom3-203ENSMUST00000113055 Ccdc180J3QNE4 1664 aa20.94■□□□□ 0.94
Shroom3-203ENSMUST00000113055 Supt5hO55201 1082 aaKnown RBP20.93■□□□□ 0.94
Shroom3-203ENSMUST00000113055 Prdm10Q3UTQ7 1184 aa20.92■□□□□ 0.94
Shroom3-203ENSMUST00000113055 Atp1b4Q99ME6 356 aa20.91■□□□□ 0.94
Shroom3-203ENSMUST00000113055 DaxxO35613 739 aa20.89■□□□□ 0.93
Shroom3-203ENSMUST00000113055 Polr3glQ8R0C0 218 aa20.86■□□□□ 0.93
Shroom3-203ENSMUST00000113055 Lmod2Q3UHZ5 550 aa20.86■□□□□ 0.93
Shroom3-203ENSMUST00000113055 Erich6D3Z6S9 713 aa20.84■□□□□ 0.93
Shroom3-203ENSMUST00000113055 ArxO35085 564 aa20.83■□□□□ 0.93
Shroom3-203ENSMUST00000113055 Rtl5Q5DTT4 599 aa20.83■□□□□ 0.92
Shroom3-203ENSMUST00000113055 Nlrp6Q91WS2 869 aa20.82■□□□□ 0.92
Shroom3-203ENSMUST00000113055 Zcchc6Q5BLK4 1491 aaKnown RBP20.79■□□□□ 0.92
Shroom3-203ENSMUST00000113055 Mier1Q5UAK0 511 aa20.72■□□□□ 0.91
Shroom3-203ENSMUST00000113055 Gm13695A2AK44 830 aa20.7■□□□□ 0.9
Shroom3-203ENSMUST00000113055 Plppr3Q7TPB0 716 aa20.67■□□□□ 0.9
Shroom3-203ENSMUST00000113055 Mapk8ip2Q9ERE9 830 aa20.67■□□□□ 0.9
Shroom3-203ENSMUST00000113055 DiexfQ8BTT6 772 aaKnown RBP20.64■□□□□ 0.89
Shroom3-203ENSMUST00000113055 Plekhg3Q4VAC9 1341 aa20.64■□□□□ 0.89
Shroom3-203ENSMUST00000113055 Anp32aO35381 247 aa20.59■□□□□ 0.89
Shroom3-203ENSMUST00000113055 Rangap1P46061 589 aaKnown RBP20.59■□□□□ 0.89
Shroom3-203ENSMUST00000113055 Gm35339A0A140LHH9 1649 aa20.59■□□□□ 0.89
Shroom3-203ENSMUST00000113055 Npm1Q61937 292 aaKnown RBP20.58■□□□□ 0.89
Shroom3-203ENSMUST00000113055 Csrnp3P59055 597 aa20.54■□□□□ 0.88
Shroom3-203ENSMUST00000113055 CatipB9EKE5 520 aa20.54■□□□□ 0.88
Shroom3-203ENSMUST00000113055 Gm38655A0A286YDK6 273 aa20.48■□□□□ 0.87
Shroom3-203ENSMUST00000113055 Abcc9P70170 1546 aa20.48■□□□□ 0.87
Shroom3-203ENSMUST00000113055 Fkbp15Q6P9Q6 1216 aaKnown RBP20.48■□□□□ 0.87
Shroom3-203ENSMUST00000113055 Rtl1Q7M732 1744 aa20.47■□□□□ 0.87
Shroom3-203ENSMUST00000113055 ClspnQ80YR7 1315 aa20.43■□□□□ 0.86
Shroom3-203ENSMUST00000113055 Ythdc1E9Q5K9 736 aaKnown RBP20.42■□□□□ 0.86
Shroom3-203ENSMUST00000113055 Eid3Q3V124 375 aa20.35■□□□□ 0.85
Shroom3-203ENSMUST00000113055 Upf2A2AT37 1269 aaKnown RBP20.33■□□□□ 0.85
Shroom3-203ENSMUST00000113055 Lmod3E9QA62 571 aa20.3■□□□□ 0.84
Shroom3-203ENSMUST00000113055 Hsp90aa1P07901 733 aaKnown RBP20.29■□□□□ 0.84
Shroom3-203ENSMUST00000113055 Rad21Q61550 635 aaKnown RBP20.24■□□□□ 0.83
Shroom3-203ENSMUST00000113055 Vsig10D3YX43 558 aa20.23■□□□□ 0.83
Shroom3-203ENSMUST00000113055 Hdac5Q9Z2V6 1113 aa20.19■□□□□ 0.82
Shroom3-203ENSMUST00000113055 DekQ7TNV0 380 aaKnown RBP20.16■□□□□ 0.82
Shroom3-203ENSMUST00000113055 Ppp4r2Q0VGB7 417 aa20.15■□□□□ 0.82
Shroom3-203ENSMUST00000113055 Fgd1P52734 960 aa20.07■□□□□ 0.8
Shroom3-203ENSMUST00000113055 Trim26Q99PN3 545 aa20.05■□□□□ 0.8
Shroom3-203ENSMUST00000113055 Safb2Q80YR5 991 aaKnown RBP20.04■□□□□ 0.8
Shroom3-203ENSMUST00000113055 Calr4Q3TQS0 420 aa20.03■□□□□ 0.8
Shroom3-203ENSMUST00000113055 Irx6Q9ER75 438 aa20.03■□□□□ 0.8
Shroom3-203ENSMUST00000113055 P3h3Q8CG70 732 aa19.99■□□□□ 0.79
Shroom3-203ENSMUST00000113055 Chic2Q9D9G3 165 aa19.97■□□□□ 0.79
Shroom3-203ENSMUST00000113055 Clip1Q922J3 1391 aa19.95■□□□□ 0.78
Shroom3-203ENSMUST00000113055 Sall2Q9QX96 1004 aa19.94■□□□□ 0.78
Shroom3-203ENSMUST00000113055 Znf326O88291 580 aa19.91■□□□□ 0.78
Shroom3-203ENSMUST00000113055 Arid4bA2CG63 1314 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 77.6 ms