RNA–Protein interactions for RNA: ENSMUST00000110387.3

Ncaph-201, Transcript of Condensin complex subunit 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncaph, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncaph-201ENSMUST00000110387 NischQ80TM9 1593 aa25.23■■□□□ 1.63
Ncaph-201ENSMUST00000110387 Gm35339A0A140LHH9 1649 aa24.6■■□□□ 1.53
Ncaph-201ENSMUST00000110387 Abcc9P70170 1546 aa24.49■■□□□ 1.51
Ncaph-201ENSMUST00000110387 Abcc8B2RUS7 1588 aa23.92■■□□□ 1.42
Ncaph-201ENSMUST00000110387 Rhox8Q6VSS7 320 aa23.69■■□□□ 1.38
Ncaph-201ENSMUST00000110387 Rtl1Q7M732 1744 aa23.31■■□□□ 1.32
Ncaph-201ENSMUST00000110387 Ccdc180J3QNE4 1664 aa23.01■■□□□ 1.27
Ncaph-201ENSMUST00000110387 Zcchc6Q5BLK4 1491 aaKnown RBP22.54■■□□□ 1.2
Ncaph-201ENSMUST00000110387 Dcaf1Q80TR8 1506 aa22.36■■□□□ 1.17
Ncaph-201ENSMUST00000110387 Rpgrip1Q9EPQ2 1331 aa22.23■■□□□ 1.15
Ncaph-201ENSMUST00000110387 ScribQ80U72 1612 aa22.12■■□□□ 1.13
Ncaph-201ENSMUST00000110387 Rb1cc1Q9ESK9 1588 aa22.09■■□□□ 1.13
Ncaph-201ENSMUST00000110387 HrcG5E8J6 738 aa22.08■■□□□ 1.13
Ncaph-201ENSMUST00000110387 Ccdc136Q3TVA9 1136 aa21.97■■□□□ 1.11
Ncaph-201ENSMUST00000110387 Baz1aO88379 1555 aa21.86■■□□□ 1.09
Ncaph-201ENSMUST00000110387 Acin1Q9JIX8 1338 aaKnown RBP21.82■■□□□ 1.08
Ncaph-201ENSMUST00000110387 Kdm5dQ62240 1548 aa21.8■■□□□ 1.08
Ncaph-201ENSMUST00000110387 NacadQ5SWP3 1504 aa21.63■■□□□ 1.05
Ncaph-201ENSMUST00000110387 Ehmt2Q9Z148 1263 aaKnown RBP21.62■■□□□ 1.05
Ncaph-201ENSMUST00000110387 Trim41Q5NCC3 630 aa21.57■■□□□ 1.04
Ncaph-201ENSMUST00000110387 Crybg2B7ZCC2 1516 aa21.48■■□□□ 1.03
Ncaph-201ENSMUST00000110387 Smarca2Q6DIC0 1577 aa21.38■■□□□ 1.01
Ncaph-201ENSMUST00000110387 Cep164Q5DU05 1446 aa21.27■■□□□ 1
Ncaph-201ENSMUST00000110387 Sycp2Q9CUU3 1500 aa21.16■□□□□ 0.98
Ncaph-201ENSMUST00000110387 Pcgf6Q99NA9 353 aa21.03■□□□□ 0.96
Ncaph-201ENSMUST00000110387 Chic1Q8CBW7 227 aa20.97■□□□□ 0.95
Ncaph-201ENSMUST00000110387 Brd4Q9ESU6 1400 aaKnown RBP20.96■□□□□ 0.95
Ncaph-201ENSMUST00000110387 Cngb1E1AZ71 1325 aa20.96■□□□□ 0.95
Ncaph-201ENSMUST00000110387 Rsf1E9PWW9 1441 aaKnown RBP20.94■□□□□ 0.94
Ncaph-201ENSMUST00000110387 Cecr2E9Q2Z1 1453 aa20.87■□□□□ 0.93
Ncaph-201ENSMUST00000110387 Gab3Q8BSM5 595 aa20.82■□□□□ 0.92
Ncaph-201ENSMUST00000110387 Golga3P55937 1487 aa20.79■□□□□ 0.92
Ncaph-201ENSMUST00000110387 Ccdc88bQ4QRL3 1481 aa20.77■□□□□ 0.91
Ncaph-201ENSMUST00000110387 Synj1Q8CHC4 1574 aa20.7■□□□□ 0.9
Ncaph-201ENSMUST00000110387 Supt5hO55201 1082 aaKnown RBP20.64■□□□□ 0.89
Ncaph-201ENSMUST00000110387 BicraF8VPZ9 1578 aa20.63■□□□□ 0.89
Ncaph-201ENSMUST00000110387 CftrP26361 1476 aa20.6■□□□□ 0.89
Ncaph-201ENSMUST00000110387 Esf1Q3V1V3 845 aaKnown RBP20.6■□□□□ 0.89
Ncaph-201ENSMUST00000110387 NefmP08553 848 aa20.5■□□□□ 0.87
Ncaph-201ENSMUST00000110387 Mier1Q5UAK0 511 aa20.49■□□□□ 0.87
Ncaph-201ENSMUST00000110387 Top2bQ64511 1612 aa20.45■□□□□ 0.86
Ncaph-201ENSMUST00000110387 Cttnbp2B9EJA2 1648 aa20.37■□□□□ 0.85
Ncaph-201ENSMUST00000110387 Zeb1Q64318 1117 aa20.36■□□□□ 0.85
Ncaph-201ENSMUST00000110387 Smarca4Q3TKT4 1613 aaKnown RBP20.26■□□□□ 0.83
Ncaph-201ENSMUST00000110387 Rapgef2Q8CHG7 1496 aa20.23■□□□□ 0.83
Ncaph-201ENSMUST00000110387 Cc2d2aQ8CFW7 1633 aa20.2■□□□□ 0.82
Ncaph-201ENSMUST00000110387 Fmn1Q05860 1466 aa20.19■□□□□ 0.82
Ncaph-201ENSMUST00000110387 Neurod1Q60867 357 aa20.15■□□□□ 0.82
Ncaph-201ENSMUST00000110387 UbtfP25976 765 aaKnown RBP20.14■□□□□ 0.82
Ncaph-201ENSMUST00000110387 Sall2Q9QX96 1004 aa20.12■□□□□ 0.81
Ncaph-201ENSMUST00000110387 Top2aQ01320 1528 aaKnown RBP20.11■□□□□ 0.81
Ncaph-201ENSMUST00000110387 Cep162Q6ZQ06 1403 aa20.08■□□□□ 0.81
Ncaph-201ENSMUST00000110387 Myt1lP97500 1187 aa20.03■□□□□ 0.8
Ncaph-201ENSMUST00000110387 Iqgap2Q3UQ44 1575 aa19.96■□□□□ 0.79
Ncaph-201ENSMUST00000110387 Npm2Q80W85 207 aa19.94■□□□□ 0.78
Ncaph-201ENSMUST00000110387 Las1lA2BE28 776 aaKnown RBP19.93■□□□□ 0.78
Ncaph-201ENSMUST00000110387 Aebp2Q9Z248 504 aaKnown RBP19.86■□□□□ 0.77
Ncaph-201ENSMUST00000110387 Atad2bE9Q166 1460 aaKnown RBP19.86■□□□□ 0.77
Ncaph-201ENSMUST00000110387 Clip1Q922J3 1391 aa19.85■□□□□ 0.77
Ncaph-201ENSMUST00000110387 Wdr66E9Q743 1299 aa19.82■□□□□ 0.76
Ncaph-201ENSMUST00000110387 Eif4g1Q6NZJ6 1600 aaKnown RBP19.78■□□□□ 0.76
Ncaph-201ENSMUST00000110387 Plekhg3Q4VAC9 1341 aa19.76■□□□□ 0.75
Ncaph-201ENSMUST00000110387 Anks4bQ8K3X6 423 aa19.75■□□□□ 0.75
Ncaph-201ENSMUST00000110387 ClspnQ80YR7 1315 aa19.74■□□□□ 0.75
Ncaph-201ENSMUST00000110387 TnnQ80Z71 1560 aa19.72■□□□□ 0.75
Ncaph-201ENSMUST00000110387 Pds5bQ4VA53 1446 aaKnown RBP19.72■□□□□ 0.75
Ncaph-201ENSMUST00000110387 TonslQ6NZL6 1363 aa19.71■□□□□ 0.75
Ncaph-201ENSMUST00000110387 Arhgap35Q91YM2 1499 aa19.66■□□□□ 0.74
Ncaph-201ENSMUST00000110387 Ncapd3Q6ZQK0 1506 aa19.66■□□□□ 0.74
Ncaph-201ENSMUST00000110387 PtprkP35822 1457 aa19.62■□□□□ 0.73
Ncaph-201ENSMUST00000110387 NrkQ9R0G8 1455 aa19.61■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Cdk11bP24788 784 aaKnown RBP19.59■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Eea1Q8BL66 1411 aa19.59■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Frmpd1A2AKB4 1549 aa19.59■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Nop58Q6DFW4 536 aaKnown RBP19.59■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Ppargc1bQ8VHJ7 1014 aa19.55■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Il27Q8K3I6 234 aa19.54■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Arap1Q4LDD4 1452 aa19.53■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Lamc3Q9R0B6 1581 aa19.53■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Wdr62Q3U3T8 1523 aa19.53■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Kif15Q6P9L6 1387 aa19.5■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Setd5Q5XJV7 1441 aa19.49■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Shroom4Q1W617 1475 aa19.48■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Ap3b1Q9Z1T1 1105 aa19.47■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Csrnp3P59055 597 aa19.47■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Arhgef5E9Q7D5 1581 aa19.46■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Ccdc18Q640L5 1455 aa19.46■□□□□ 0.7
Ncaph-201ENSMUST00000110387 Map3k1P53349 1493 aa19.44■□□□□ 0.7
Ncaph-201ENSMUST00000110387 1700123L14RikQ3V2K7 440 aa19.41■□□□□ 0.7
Ncaph-201ENSMUST00000110387 Camsap1A2AHC3 1581 aa19.39■□□□□ 0.69
Ncaph-201ENSMUST00000110387 Kdm5bQ80Y84 1544 aa19.38■□□□□ 0.69
Ncaph-201ENSMUST00000110387 Eid3Q3V124 375 aa19.35■□□□□ 0.69
Ncaph-201ENSMUST00000110387 Ercc6F8VPZ5 1481 aa19.34■□□□□ 0.69
Ncaph-201ENSMUST00000110387 Grin2bQ01097 1482 aa19.33■□□□□ 0.68
Ncaph-201ENSMUST00000110387 Mroh2bQ7M6Y6 1581 aa19.33■□□□□ 0.68
Ncaph-201ENSMUST00000110387 Tiam1Q60610 1591 aa19.31■□□□□ 0.68
Ncaph-201ENSMUST00000110387 Naip1Q9QWK5 1403 aa19.3■□□□□ 0.68
Ncaph-201ENSMUST00000110387 BlmO88700 1416 aa19.29■□□□□ 0.68
Ncaph-201ENSMUST00000110387 Baz1bQ9Z277 1479 aa19.25■□□□□ 0.67
Ncaph-201ENSMUST00000110387 AqrQ8CFQ3 1481 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms