RNA–Protein interactions for RNA: ENSMUST00000110029.8

Limk2-204, Transcript of LIM domain kinase 2, mousemouse

TSL 1 (best) BASIC

Gene Limk2, Length 2,939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2-204ENSMUST00000110029 NischQ80TM9 1593 aa17.1■□□□□ 0.33
Limk2-204ENSMUST00000110029 Gm35339A0A140LHH9 1649 aa16.91■□□□□ 0.3
Limk2-204ENSMUST00000110029 Abcc9P70170 1546 aa16.62■□□□□ 0.25
Limk2-204ENSMUST00000110029 Abcc8B2RUS7 1588 aa16.3■□□□□ 0.2
Limk2-204ENSMUST00000110029 Rhox8Q6VSS7 320 aa15.63■□□□□ 0.09
Limk2-204ENSMUST00000110029 Rpgrip1Q9EPQ2 1331 aa15.57■□□□□ 0.08
Limk2-204ENSMUST00000110029 Rtl1Q7M732 1744 aa15.3■□□□□ 0.04
Limk2-204ENSMUST00000110029 ScribQ80U72 1612 aa15.24■□□□□ 0.03
Limk2-204ENSMUST00000110029 Dcaf1Q80TR8 1506 aa15.23■□□□□ 0.03
Limk2-204ENSMUST00000110029 Pcgf6Q99NA9 353 aa15.14■□□□□ 0.01
Limk2-204ENSMUST00000110029 Ccdc180J3QNE4 1664 aa14.98□□□□□ -0.01
Limk2-204ENSMUST00000110029 Rb1cc1Q9ESK9 1588 aa14.97□□□□□ -0.01
Limk2-204ENSMUST00000110029 Kdm5dQ62240 1548 aa14.95□□□□□ -0.02
Limk2-204ENSMUST00000110029 NacadQ5SWP3 1504 aa14.89□□□□□ -0.03
Limk2-204ENSMUST00000110029 Acin1Q9JIX8 1338 aaKnown RBP14.89□□□□□ -0.03
Limk2-204ENSMUST00000110029 Baz1aO88379 1555 aa14.81□□□□□ -0.04
Limk2-204ENSMUST00000110029 Zcchc6Q5BLK4 1491 aaKnown RBP14.8□□□□□ -0.04
Limk2-204ENSMUST00000110029 Crybg2B7ZCC2 1516 aa14.61□□□□□ -0.07
Limk2-204ENSMUST00000110029 DiexfQ8BTT6 772 aaKnown RBP14.59□□□□□ -0.07
Limk2-204ENSMUST00000110029 Neurod1Q60867 357 aa14.58□□□□□ -0.08
Limk2-204ENSMUST00000110029 Sycp2Q9CUU3 1500 aa14.56□□□□□ -0.08
Limk2-204ENSMUST00000110029 Las1lA2BE28 776 aaKnown RBP14.55□□□□□ -0.08
Limk2-204ENSMUST00000110029 Myt1Q8CFC2 1127 aa14.55□□□□□ -0.08
Limk2-204ENSMUST00000110029 CenpbP27790 599 aa14.52□□□□□ -0.09
Limk2-204ENSMUST00000110029 Ccdc136Q3TVA9 1136 aa14.5□□□□□ -0.09
Limk2-204ENSMUST00000110029 Smarca2Q6DIC0 1577 aa14.46□□□□□ -0.1
Limk2-204ENSMUST00000110029 1700123L14RikQ3V2K7 440 aa14.42□□□□□ -0.1
Limk2-204ENSMUST00000110029 Supt5hO55201 1082 aaKnown RBP14.39□□□□□ -0.11
Limk2-204ENSMUST00000110029 Trim41Q5NCC3 630 aa14.34□□□□□ -0.11
Limk2-204ENSMUST00000110029 HrcG5E8J6 738 aa14.33□□□□□ -0.12
Limk2-204ENSMUST00000110029 Bcl11aQ9QYE3 773 aa14.3□□□□□ -0.12
Limk2-204ENSMUST00000110029 Ehmt2Q9Z148 1263 aaKnown RBP14.29□□□□□ -0.12
Limk2-204ENSMUST00000110029 BicraF8VPZ9 1578 aa14.22□□□□□ -0.13
Limk2-204ENSMUST00000110029 Brd4Q9ESU6 1400 aaKnown RBP14.13□□□□□ -0.15
Limk2-204ENSMUST00000110029 Csrnp3P59055 597 aa14.13□□□□□ -0.15
Limk2-204ENSMUST00000110029 Cecr2E9Q2Z1 1453 aa14.11□□□□□ -0.15
Limk2-204ENSMUST00000110029 PrkcshO08795 521 aa14.01□□□□□ -0.17
Limk2-204ENSMUST00000110029 Anks4bQ8K3X6 423 aa14□□□□□ -0.17
Limk2-204ENSMUST00000110029 Synj1Q8CHC4 1574 aa13.98□□□□□ -0.17
Limk2-204ENSMUST00000110029 Cep164Q5DU05 1446 aa13.96□□□□□ -0.17
Limk2-204ENSMUST00000110029 Aplp2Q06335 707 aa13.95□□□□□ -0.18
Limk2-204ENSMUST00000110029 CftrP26361 1476 aa13.94□□□□□ -0.18
Limk2-204ENSMUST00000110029 Golga3P55937 1487 aa13.91□□□□□ -0.18
Limk2-204ENSMUST00000110029 Cngb1E1AZ71 1325 aa13.9□□□□□ -0.18
Limk2-204ENSMUST00000110029 Smarca4Q3TKT4 1613 aaKnown RBP13.89□□□□□ -0.19
Limk2-204ENSMUST00000110029 Cttnbp2B9EJA2 1648 aa13.87□□□□□ -0.19
Limk2-204ENSMUST00000110029 Amer1Q7TS75 1132 aa13.86□□□□□ -0.19
Limk2-204ENSMUST00000110029 Rsf1E9PWW9 1441 aaKnown RBP13.82□□□□□ -0.2
Limk2-204ENSMUST00000110029 Esf1Q3V1V3 845 aaKnown RBP13.8□□□□□ -0.2
Limk2-204ENSMUST00000110029 Chic1Q8CBW7 227 aa13.77□□□□□ -0.21
Limk2-204ENSMUST00000110029 Ccdc88bQ4QRL3 1481 aa13.75□□□□□ -0.21
Limk2-204ENSMUST00000110029 Top2bQ64511 1612 aa13.75□□□□□ -0.21
Limk2-204ENSMUST00000110029 Iqgap2Q3UQ44 1575 aa13.71□□□□□ -0.21
Limk2-204ENSMUST00000110029 Atad2bE9Q166 1460 aaKnown RBP13.71□□□□□ -0.21
Limk2-204ENSMUST00000110029 Ifnlr1Q8CGK5 535 aa13.69□□□□□ -0.22
Limk2-204ENSMUST00000110029 Gm38655A0A286YDK6 273 aa13.68□□□□□ -0.22
Limk2-204ENSMUST00000110029 Pds5bQ4VA53 1446 aaKnown RBP13.68□□□□□ -0.22
Limk2-204ENSMUST00000110029 Sall2Q9QX96 1004 aa13.66□□□□□ -0.22
Limk2-204ENSMUST00000110029 Zeb1Q64318 1117 aa13.66□□□□□ -0.22
Limk2-204ENSMUST00000110029 Gab3Q8BSM5 595 aa13.6□□□□□ -0.23
Limk2-204ENSMUST00000110029 Fmn1Q05860 1466 aa13.58□□□□□ -0.23
Limk2-204ENSMUST00000110029 Cc2d2aQ8CFW7 1633 aa13.58□□□□□ -0.24
Limk2-204ENSMUST00000110029 Fam71e1A1L3C1 212 aa13.54□□□□□ -0.24
Limk2-204ENSMUST00000110029 Top2aQ01320 1528 aaKnown RBP13.48□□□□□ -0.25
Limk2-204ENSMUST00000110029 Wdr62Q3U3T8 1523 aa13.47□□□□□ -0.25
Limk2-204ENSMUST00000110029 Frmpd1A2AKB4 1549 aa13.46□□□□□ -0.25
Limk2-204ENSMUST00000110029 Cdk11bP24788 784 aaKnown RBP13.44□□□□□ -0.26
Limk2-204ENSMUST00000110029 Ercc6F8VPZ5 1481 aa13.43□□□□□ -0.26
Limk2-204ENSMUST00000110029 Rapgef2Q8CHG7 1496 aa13.41□□□□□ -0.26
Limk2-204ENSMUST00000110029 TnnQ80Z71 1560 aa13.39□□□□□ -0.27
Limk2-204ENSMUST00000110029 Nop58Q6DFW4 536 aaKnown RBP13.36□□□□□ -0.27
Limk2-204ENSMUST00000110029 Lamc3Q9R0B6 1581 aa13.32□□□□□ -0.28
Limk2-204ENSMUST00000110029 NefmP08553 848 aa13.32□□□□□ -0.28
Limk2-204ENSMUST00000110029 Cep162Q6ZQ06 1403 aa13.3□□□□□ -0.28
Limk2-204ENSMUST00000110029 Hdac5Q9Z2V6 1113 aa13.29□□□□□ -0.28
Limk2-204ENSMUST00000110029 Mapk8ip2Q9ERE9 830 aa13.28□□□□□ -0.28
Limk2-204ENSMUST00000110029 Kif15Q6P9L6 1387 aa13.27□□□□□ -0.28
Limk2-204ENSMUST00000110029 Unc13aQ4KUS2 1712 aa13.24□□□□□ -0.29
Limk2-204ENSMUST00000110029 Thoc2B1AZI6 1594 aaKnown RBP13.24□□□□□ -0.29
Limk2-204ENSMUST00000110029 Fgd1P52734 960 aa13.24□□□□□ -0.29
Limk2-204ENSMUST00000110029 Npm2Q80W85 207 aa13.24□□□□□ -0.29
Limk2-204ENSMUST00000110029 Pknox2Q8BG99 474 aa13.23□□□□□ -0.29
Limk2-204ENSMUST00000110029 Phldb1Q6PDH0 1371 aaKnown RBP13.22□□□□□ -0.29
Limk2-204ENSMUST00000110029 Eif4g1Q6NZJ6 1600 aaKnown RBP13.2□□□□□ -0.3
Limk2-204ENSMUST00000110029 SafbD3YXK2 937 aaKnown RBP13.19□□□□□ -0.3
Limk2-204ENSMUST00000110029 Camsap1A2AHC3 1581 aa13.18□□□□□ -0.3
Limk2-204ENSMUST00000110029 Myt1lP97500 1187 aa13.18□□□□□ -0.3
Limk2-204ENSMUST00000110029 Ccdc18Q640L5 1455 aa13.16□□□□□ -0.3
Limk2-204ENSMUST00000110029 NrkQ9R0G8 1455 aa13.16□□□□□ -0.3
Limk2-204ENSMUST00000110029 Wdr66E9Q743 1299 aa13.15□□□□□ -0.3
Limk2-204ENSMUST00000110029 Il27Q8K3I6 234 aa13.15□□□□□ -0.3
Limk2-204ENSMUST00000110029 NrdcQ8BHG1 1161 aa13.13□□□□□ -0.31
Limk2-204ENSMUST00000110029 Aebp2Q9Z248 504 aaKnown RBP13.13□□□□□ -0.31
Limk2-204ENSMUST00000110029 PtprkP35822 1457 aa13.13□□□□□ -0.31
Limk2-204ENSMUST00000110029 Shroom4Q1W617 1475 aa13.12□□□□□ -0.31
Limk2-204ENSMUST00000110029 Arhgap35Q91YM2 1499 aa13.12□□□□□ -0.31
Limk2-204ENSMUST00000110029 Fam135aQ6NS59 1506 aa13.11□□□□□ -0.31
Limk2-204ENSMUST00000110029 Grin2bQ01097 1482 aa13.09□□□□□ -0.31
Limk2-204ENSMUST00000110029 Rtl5Q5DTT4 599 aa13.09□□□□□ -0.31
Limk2-204ENSMUST00000110029 Ubl4bQ9CQ84 188 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms