RNA–Protein interactions for RNA: ENSMUST00000109401.7

Tnpo1-202, Transcript of Transportin-1, mousemouse

TSL 1 (best) BASIC

Gene Tnpo1, Length 8,453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnpo1-202ENSMUST00000109401 Rhox8Q6VSS7 320 aa10.47□□□□□ -0.73
Tnpo1-202ENSMUST00000109401 Ehmt2Q9Z148 1263 aaKnown RBP9.62□□□□□ -0.87
Tnpo1-202ENSMUST00000109401 Ccdc136Q3TVA9 1136 aa9.43□□□□□ -0.9
Tnpo1-202ENSMUST00000109401 Gab3Q8BSM5 595 aa9.22□□□□□ -0.93
Tnpo1-202ENSMUST00000109401 Cngb1E1AZ71 1325 aa9.17□□□□□ -0.94
Tnpo1-202ENSMUST00000109401 Rpgrip1Q9EPQ2 1331 aa9.1□□□□□ -0.95
Tnpo1-202ENSMUST00000109401 NischQ80TM9 1593 aa9.1□□□□□ -0.95
Tnpo1-202ENSMUST00000109401 Trim41Q5NCC3 630 aa9.09□□□□□ -0.95
Tnpo1-202ENSMUST00000109401 Esf1Q3V1V3 845 aaKnown RBP9.08□□□□□ -0.96
Tnpo1-202ENSMUST00000109401 Zeb1Q64318 1117 aa9.02□□□□□ -0.97
Tnpo1-202ENSMUST00000109401 Wdr66E9Q743 1299 aa8.98□□□□□ -0.97
Tnpo1-202ENSMUST00000109401 Myt1lP97500 1187 aa8.93□□□□□ -0.98
Tnpo1-202ENSMUST00000109401 Npm2Q80W85 207 aa8.87□□□□□ -0.99
Tnpo1-202ENSMUST00000109401 Acin1Q9JIX8 1338 aaKnown RBP8.84□□□□□ -1
Tnpo1-202ENSMUST00000109401 Ube2uB1AUC4 352 aa8.79□□□□□ -1
Tnpo1-202ENSMUST00000109401 Las1lA2BE28 776 aaKnown RBP8.79□□□□□ -1
Tnpo1-202ENSMUST00000109401 UbtfP25976 765 aaKnown RBP8.79□□□□□ -1
Tnpo1-202ENSMUST00000109401 Ppargc1bQ8VHJ7 1014 aa8.71□□□□□ -1.02
Tnpo1-202ENSMUST00000109401 Il27Q8K3I6 234 aa8.7□□□□□ -1.02
Tnpo1-202ENSMUST00000109401 HrcG5E8J6 738 aa8.68□□□□□ -1.02
Tnpo1-202ENSMUST00000109401 Pcgf6Q99NA9 353 aa8.62□□□□□ -1.03
Tnpo1-202ENSMUST00000109401 Abcc9P70170 1546 aa8.62□□□□□ -1.03
Tnpo1-202ENSMUST00000109401 Ap3b1Q9Z1T1 1105 aa8.6□□□□□ -1.03
Tnpo1-202ENSMUST00000109401 Zcchc6Q5BLK4 1491 aaKnown RBP8.58□□□□□ -1.04
Tnpo1-202ENSMUST00000109401 NefmP08553 848 aa8.56□□□□□ -1.04
Tnpo1-202ENSMUST00000109401 Supt5hO55201 1082 aaKnown RBP8.56□□□□□ -1.04
Tnpo1-202ENSMUST00000109401 Slc24a1Q91WD8 1130 aa8.54□□□□□ -1.04
Tnpo1-202ENSMUST00000109401 Myt1Q8CFC2 1127 aa8.5□□□□□ -1.05
Tnpo1-202ENSMUST00000109401 Gm35339A0A140LHH9 1649 aa8.48□□□□□ -1.05
Tnpo1-202ENSMUST00000109401 Mier1Q5UAK0 511 aa8.47□□□□□ -1.05
Tnpo1-202ENSMUST00000109401 Fam50aQ9WV03 339 aaKnown RBP8.45□□□□□ -1.06
Tnpo1-202ENSMUST00000109401 Chic1Q8CBW7 227 aa8.44□□□□□ -1.06
Tnpo1-202ENSMUST00000109401 Neurod1Q60867 357 aa8.42□□□□□ -1.06
Tnpo1-202ENSMUST00000109401 Abcc8B2RUS7 1588 aa8.41□□□□□ -1.06
Tnpo1-202ENSMUST00000109401 Cdk11bP24788 784 aaKnown RBP8.4□□□□□ -1.06
Tnpo1-202ENSMUST00000109401 Plekhg3Q4VAC9 1341 aa8.38□□□□□ -1.07
Tnpo1-202ENSMUST00000109401 Lmod2Q3UHZ5 550 aa8.38□□□□□ -1.07
Tnpo1-202ENSMUST00000109401 CenpbP27790 599 aa8.36□□□□□ -1.07
Tnpo1-202ENSMUST00000109401 Nop58Q6DFW4 536 aaKnown RBP8.36□□□□□ -1.07
Tnpo1-202ENSMUST00000109401 Mapk8ip2Q9ERE9 830 aa8.35□□□□□ -1.07
Tnpo1-202ENSMUST00000109401 NclP09405 707 aaKnown RBP8.31□□□□□ -1.08
Tnpo1-202ENSMUST00000109401 Eid3Q3V124 375 aa8.31□□□□□ -1.08
Tnpo1-202ENSMUST00000109401 Gm38655A0A286YDK6 273 aa8.3□□□□□ -1.08
Tnpo1-202ENSMUST00000109401 Sall2Q9QX96 1004 aa8.3□□□□□ -1.08
Tnpo1-202ENSMUST00000109401 TonslQ6NZL6 1363 aa8.28□□□□□ -1.08
Tnpo1-202ENSMUST00000109401 Eif5bQ05D44 1216 aaKnown RBP8.27□□□□□ -1.09
Tnpo1-202ENSMUST00000109401 Zbtb7cQ8VCZ7 619 aa8.26□□□□□ -1.09
Tnpo1-202ENSMUST00000109401 Ccdc180J3QNE4 1664 aa8.23□□□□□ -1.09
Tnpo1-202ENSMUST00000109401 Pelp1Q9DBD5 1123 aaKnown RBP8.21□□□□□ -1.09
Tnpo1-202ENSMUST00000109401 Zbtb4Q5F293 982 aa8.19□□□□□ -1.1
Tnpo1-202ENSMUST00000109401 Npm1Q61937 292 aaKnown RBP8.19□□□□□ -1.1
Tnpo1-202ENSMUST00000109401 Stra8P70278 393 aa8.16□□□□□ -1.1
Tnpo1-202ENSMUST00000109401 NrdcQ8BHG1 1161 aa8.16□□□□□ -1.1
Tnpo1-202ENSMUST00000109401 Ifnlr1Q8CGK5 535 aa8.14□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 Fkbp15Q6P9Q6 1216 aaKnown RBP8.14□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 Ttbk1Q6PCN3 1308 aa8.13□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 ClspnQ80YR7 1315 aa8.12□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 Clip1Q922J3 1391 aa8.12□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 Cep164Q5DU05 1446 aa8.11□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 Os9Q8K2C7 672 aa8.11□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 Csrnp3P59055 597 aa8.11□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 Aebp2Q9Z248 504 aaKnown RBP8.1□□□□□ -1.11
Tnpo1-202ENSMUST00000109401 Chic2Q9D9G3 165 aa8.08□□□□□ -1.12
Tnpo1-202ENSMUST00000109401 Hnrnpul2Q00PI9 745 aaKnown RBP8.08□□□□□ -1.12
Tnpo1-202ENSMUST00000109401 Dcaf1Q80TR8 1506 aa8.08□□□□□ -1.12
Tnpo1-202ENSMUST00000109401 Prdm10Q3UTQ7 1184 aa8.07□□□□□ -1.12
Tnpo1-202ENSMUST00000109401 Amer1Q7TS75 1132 aa8.07□□□□□ -1.12
Tnpo1-202ENSMUST00000109401 Tnnt3Q9QZ47 272 aa8.07□□□□□ -1.12
Tnpo1-202ENSMUST00000109401 CatipB9EKE5 520 aa8.06□□□□□ -1.12
Tnpo1-202ENSMUST00000109401 Brd4Q9ESU6 1400 aaKnown RBP8.05□□□□□ -1.12
Tnpo1-202ENSMUST00000109401 Ubl4bQ9CQ84 188 aa8□□□□□ -1.13
Tnpo1-202ENSMUST00000109401 Anp32bQ9EST5 272 aaKnown RBP8□□□□□ -1.13
Tnpo1-202ENSMUST00000109401 Erich6D3Z6S9 713 aa8□□□□□ -1.13
Tnpo1-202ENSMUST00000109401 Anks4bQ8K3X6 423 aa7.97□□□□□ -1.13
Tnpo1-202ENSMUST00000109401 Rsf1E9PWW9 1441 aaKnown RBP7.97□□□□□ -1.13
Tnpo1-202ENSMUST00000109401 DiexfQ8BTT6 772 aaKnown RBP7.96□□□□□ -1.13
Tnpo1-202ENSMUST00000109401 4933416C03RikQ3V063 378 aa7.94□□□□□ -1.14
Tnpo1-202ENSMUST00000109401 NeflP08551 543 aa7.94□□□□□ -1.14
Tnpo1-202ENSMUST00000109401 BlmO88700 1416 aa7.93□□□□□ -1.14
Tnpo1-202ENSMUST00000109401 Rb1cc1Q9ESK9 1588 aa7.92□□□□□ -1.14
Tnpo1-202ENSMUST00000109401 Setd5Q5XJV7 1441 aa7.91□□□□□ -1.14
Tnpo1-202ENSMUST00000109401 Mrs2Q5NCE8 434 aa7.91□□□□□ -1.14
Tnpo1-202ENSMUST00000109401 1700123L14RikQ3V2K7 440 aa7.9□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Golga3P55937 1487 aa7.89□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Anp32aO35381 247 aa7.88□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Rad21Q61550 635 aaKnown RBP7.88□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Ccdc88bQ4QRL3 1481 aa7.88□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 ArxO35085 564 aa7.87□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Atp1b4Q99ME6 356 aa7.87□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Rangap1P46061 589 aaKnown RBP7.86□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Kif15Q6P9L6 1387 aa7.86□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Plppr3Q7TPB0 716 aa7.86□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 P3h3Q8CG70 732 aa7.86□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Polr3glQ8R0C0 218 aa7.86□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 NacadQ5SWP3 1504 aa7.85□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Gm13697A2AK42 830 aa7.85□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Ppp4r2Q0VGB7 417 aa7.85□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Rgl3Q3UYI5 709 aa7.84□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 SafbD3YXK2 937 aaKnown RBP7.84□□□□□ -1.15
Tnpo1-202ENSMUST00000109401 Calr4Q3TQS0 420 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 60.1 ms