RNA–Protein interactions for RNA: ENSMUST00000108858.7

Sparc-202, Transcript of SPARC, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sparc, Length 2,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sparc-202ENSMUST00000108858 Chic1Q8CBW7 227 aa25.88■■□□□ 1.73
Sparc-202ENSMUST00000108858 Mapk8ip2Q9ERE9 830 aa25.54■■□□□ 1.68
Sparc-202ENSMUST00000108858 Phf23Q8BSN5 401 aa23.17■■□□□ 1.3
Sparc-202ENSMUST00000108858 NischQ80TM9 1593 aa22.36■■□□□ 1.17
Sparc-202ENSMUST00000108858 Gm35339A0A140LHH9 1649 aa22.25■■□□□ 1.15
Sparc-202ENSMUST00000108858 Plppr3Q7TPB0 716 aa22.18■■□□□ 1.14
Sparc-202ENSMUST00000108858 Gab3Q8BSM5 595 aa22.16■■□□□ 1.14
Sparc-202ENSMUST00000108858 Abcc9P70170 1546 aa21.7■■□□□ 1.06
Sparc-202ENSMUST00000108858 Abcc8B2RUS7 1588 aa21.37■■□□□ 1.01
Sparc-202ENSMUST00000108858 Senp3Q9EP97 568 aaKnown RBP21.14■□□□□ 0.98
Sparc-202ENSMUST00000108858 Rhox8Q6VSS7 320 aa20.16■□□□□ 0.82
Sparc-202ENSMUST00000108858 ScribQ80U72 1612 aa20.05■□□□□ 0.8
Sparc-202ENSMUST00000108858 Rtl1Q7M732 1744 aa20.02■□□□□ 0.8
Sparc-202ENSMUST00000108858 Dcaf1Q80TR8 1506 aa20■□□□□ 0.79
Sparc-202ENSMUST00000108858 Kcna4Q61423 654 aa19.96■□□□□ 0.79
Sparc-202ENSMUST00000108858 Ccdc180J3QNE4 1664 aa19.66■□□□□ 0.74
Sparc-202ENSMUST00000108858 NacadQ5SWP3 1504 aa19.65■□□□□ 0.74
Sparc-202ENSMUST00000108858 Kdm5dQ62240 1548 aa19.63■□□□□ 0.73
Sparc-202ENSMUST00000108858 Rb1cc1Q9ESK9 1588 aa19.53■□□□□ 0.72
Sparc-202ENSMUST00000108858 Baz1aO88379 1555 aa19.35■□□□□ 0.69
Sparc-202ENSMUST00000108858 Crybg2B7ZCC2 1516 aa19.24■□□□□ 0.67
Sparc-202ENSMUST00000108858 Sycp2Q9CUU3 1500 aa19.2■□□□□ 0.66
Sparc-202ENSMUST00000108858 Rpgrip1Q9EPQ2 1331 aa19.12■□□□□ 0.65
Sparc-202ENSMUST00000108858 Fam163aQ8CAA5 168 aa19.1■□□□□ 0.65
Sparc-202ENSMUST00000108858 Zcchc6Q5BLK4 1491 aaKnown RBP19.09■□□□□ 0.65
Sparc-202ENSMUST00000108858 Smarca2Q6DIC0 1577 aa18.84■□□□□ 0.61
Sparc-202ENSMUST00000108858 Trap1aP19473 224 aa18.75■□□□□ 0.59
Sparc-202ENSMUST00000108858 Hoxd11P23813 323 aa18.75■□□□□ 0.59
Sparc-202ENSMUST00000108858 BicraF8VPZ9 1578 aa18.74■□□□□ 0.59
Sparc-202ENSMUST00000108858 HrcG5E8J6 738 aa18.7■□□□□ 0.58
Sparc-202ENSMUST00000108858 Ccdc136Q3TVA9 1136 aa18.7■□□□□ 0.58
Sparc-202ENSMUST00000108858 Acin1Q9JIX8 1338 aaKnown RBP18.59■□□□□ 0.57
Sparc-202ENSMUST00000108858 Trim41Q5NCC3 630 aa18.58■□□□□ 0.56
Sparc-202ENSMUST00000108858 Brd4Q9ESU6 1400 aaKnown RBP18.46■□□□□ 0.55
Sparc-202ENSMUST00000108858 Cecr2E9Q2Z1 1453 aa18.42■□□□□ 0.54
Sparc-202ENSMUST00000108858 Smarca4Q3TKT4 1613 aaKnown RBP18.27■□□□□ 0.52
Sparc-202ENSMUST00000108858 CftrP26361 1476 aa18.21■□□□□ 0.51
Sparc-202ENSMUST00000108858 Synj1Q8CHC4 1574 aa18.19■□□□□ 0.5
Sparc-202ENSMUST00000108858 Pds5bQ4VA53 1446 aaKnown RBP18.18■□□□□ 0.5
Sparc-202ENSMUST00000108858 Atad2bE9Q166 1460 aaKnown RBP18.15■□□□□ 0.5
Sparc-202ENSMUST00000108858 Cttnbp2B9EJA2 1648 aa18.14■□□□□ 0.5
Sparc-202ENSMUST00000108858 Znf219Q6IQX8 726 aa18.13■□□□□ 0.49
Sparc-202ENSMUST00000108858 Ehmt2Q9Z148 1263 aaKnown RBP18.13■□□□□ 0.49
Sparc-202ENSMUST00000108858 Golga3P55937 1487 aa18.05■□□□□ 0.48
Sparc-202ENSMUST00000108858 Iqgap2Q3UQ44 1575 aa18.04■□□□□ 0.48
Sparc-202ENSMUST00000108858 Cep164Q5DU05 1446 aa18.02■□□□□ 0.48
Sparc-202ENSMUST00000108858 Esf1Q3V1V3 845 aaKnown RBP18.02■□□□□ 0.47
Sparc-202ENSMUST00000108858 Cngb1E1AZ71 1325 aa17.96■□□□□ 0.47
Sparc-202ENSMUST00000108858 Pcgf6Q99NA9 353 aa17.89■□□□□ 0.45
Sparc-202ENSMUST00000108858 Top2bQ64511 1612 aa17.86■□□□□ 0.45
Sparc-202ENSMUST00000108858 Dmrt2Q8BG36 561 aa17.81■□□□□ 0.44
Sparc-202ENSMUST00000108858 Chrna2Q91X60 512 aa17.8■□□□□ 0.44
Sparc-202ENSMUST00000108858 Ercc6F8VPZ5 1481 aa17.79■□□□□ 0.44
Sparc-202ENSMUST00000108858 Wdr62Q3U3T8 1523 aa17.77■□□□□ 0.44
Sparc-202ENSMUST00000108858 Rsf1E9PWW9 1441 aaKnown RBP17.76■□□□□ 0.43
Sparc-202ENSMUST00000108858 Frmpd1A2AKB4 1549 aa17.74■□□□□ 0.43
Sparc-202ENSMUST00000108858 Ccdc88bQ4QRL3 1481 aa17.71■□□□□ 0.43
Sparc-202ENSMUST00000108858 Fmn1Q05860 1466 aa17.7■□□□□ 0.42
Sparc-202ENSMUST00000108858 Rsph4aQ8BYM7 716 aa17.67■□□□□ 0.42
Sparc-202ENSMUST00000108858 ArsiQ32KI9 573 aa17.63■□□□□ 0.41
Sparc-202ENSMUST00000108858 Thoc2B1AZI6 1594 aaKnown RBP17.61■□□□□ 0.41
Sparc-202ENSMUST00000108858 Cc2d2aQ8CFW7 1633 aa17.59■□□□□ 0.41
Sparc-202ENSMUST00000108858 Phldb1Q6PDH0 1371 aaKnown RBP17.54■□□□□ 0.4
Sparc-202ENSMUST00000108858 TnnQ80Z71 1560 aa17.5■□□□□ 0.39
Sparc-202ENSMUST00000108858 Supt5hO55201 1082 aaKnown RBP17.49■□□□□ 0.39
Sparc-202ENSMUST00000108858 Lamc3Q9R0B6 1581 aa17.49■□□□□ 0.39
Sparc-202ENSMUST00000108858 Top2aQ01320 1528 aaKnown RBP17.48■□□□□ 0.39
Sparc-202ENSMUST00000108858 NefmP08553 848 aa17.45■□□□□ 0.38
Sparc-202ENSMUST00000108858 Unc13aQ4KUS2 1712 aa17.42■□□□□ 0.38
Sparc-202ENSMUST00000108858 Kif15Q6P9L6 1387 aa17.42■□□□□ 0.38
Sparc-202ENSMUST00000108858 Fam135aQ6NS59 1506 aa17.41■□□□□ 0.38
Sparc-202ENSMUST00000108858 Rimbp2Q80U40 1072 aa17.41■□□□□ 0.38
Sparc-202ENSMUST00000108858 Baz1bQ9Z277 1479 aa17.36■□□□□ 0.37
Sparc-202ENSMUST00000108858 Ubl4bQ9CQ84 188 aa17.35■□□□□ 0.37
Sparc-202ENSMUST00000108858 Rapgef2Q8CHG7 1496 aa17.31■□□□□ 0.36
Sparc-202ENSMUST00000108858 Ccdc18Q640L5 1455 aa17.29■□□□□ 0.36
Sparc-202ENSMUST00000108858 Mier1Q5UAK0 511 aa17.28■□□□□ 0.36
Sparc-202ENSMUST00000108858 Camsap1A2AHC3 1581 aa17.24■□□□□ 0.35
Sparc-202ENSMUST00000108858 Ppargc1bQ8VHJ7 1014 aa17.23■□□□□ 0.35
Sparc-202ENSMUST00000108858 Dnajc5bQ9CQ94 199 aa17.23■□□□□ 0.35
Sparc-202ENSMUST00000108858 Cux2P70298 1426 aa17.22■□□□□ 0.35
Sparc-202ENSMUST00000108858 Zeb1Q64318 1117 aa17.2■□□□□ 0.34
Sparc-202ENSMUST00000108858 NrkQ9R0G8 1455 aa17.18■□□□□ 0.34
Sparc-202ENSMUST00000108858 Npm1Q61937 292 aaKnown RBP17.17■□□□□ 0.34
Sparc-202ENSMUST00000108858 Cep162Q6ZQ06 1403 aa17.17■□□□□ 0.34
Sparc-202ENSMUST00000108858 Npm2Q80W85 207 aa17.17■□□□□ 0.34
Sparc-202ENSMUST00000108858 Il27Q8K3I6 234 aa17.16■□□□□ 0.34
Sparc-202ENSMUST00000108858 Akt1s1Q9D1F4 257 aa17.15■□□□□ 0.34
Sparc-202ENSMUST00000108858 Neurod1Q60867 357 aa17.13■□□□□ 0.33
Sparc-202ENSMUST00000108858 Grin2bQ01097 1482 aa17.12■□□□□ 0.33
Sparc-202ENSMUST00000108858 Shroom4Q1W617 1475 aa17.09■□□□□ 0.33
Sparc-202ENSMUST00000108858 LrpprcQ6PB66 1392 aaKnown RBP17.06■□□□□ 0.32
Sparc-202ENSMUST00000108858 Mrc2Q64449 1479 aa17.04■□□□□ 0.32
Sparc-202ENSMUST00000108858 Eif4g1Q6NZJ6 1600 aaKnown RBP17.04■□□□□ 0.32
Sparc-202ENSMUST00000108858 Efcab5A0JP43 1406 aa17.03■□□□□ 0.32
Sparc-202ENSMUST00000108858 PtprkP35822 1457 aa17.03■□□□□ 0.32
Sparc-202ENSMUST00000108858 Sall2Q9QX96 1004 aa17.03■□□□□ 0.32
Sparc-202ENSMUST00000108858 Atf5O70191 283 aa17.01■□□□□ 0.31
Sparc-202ENSMUST00000108858 PogzQ8BZH4 1409 aaKnown RBP17■□□□□ 0.31
Sparc-202ENSMUST00000108858 Las1lA2BE28 776 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms