RNA–Protein interactions for RNA: ENSMUST00000093923.8

Cdc27-201, Transcript of Cell division cycle protein 27 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc27, Length 5,425 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc27-201ENSMUST00000093923 Gm35339A0A140LHH9 1649 aa11.3□□□□□ -0.6
Cdc27-201ENSMUST00000093923 NischQ80TM9 1593 aa11.19□□□□□ -0.62
Cdc27-201ENSMUST00000093923 Abcc9P70170 1546 aa10.96□□□□□ -0.65
Cdc27-201ENSMUST00000093923 Abcc8B2RUS7 1588 aa10.68□□□□□ -0.7
Cdc27-201ENSMUST00000093923 Rtl1Q7M732 1744 aa10.42□□□□□ -0.74
Cdc27-201ENSMUST00000093923 ScribQ80U72 1612 aa10.41□□□□□ -0.74
Cdc27-201ENSMUST00000093923 Zcchc6Q5BLK4 1491 aaKnown RBP10.22□□□□□ -0.77
Cdc27-201ENSMUST00000093923 Ccdc180J3QNE4 1664 aa10.21□□□□□ -0.77
Cdc27-201ENSMUST00000093923 Rhox8Q6VSS7 320 aa10.05□□□□□ -0.8
Cdc27-201ENSMUST00000093923 Dcaf1Q80TR8 1506 aa9.96□□□□□ -0.82
Cdc27-201ENSMUST00000093923 Rb1cc1Q9ESK9 1588 aa9.82□□□□□ -0.84
Cdc27-201ENSMUST00000093923 Kdm5dQ62240 1548 aa9.72□□□□□ -0.85
Cdc27-201ENSMUST00000093923 Baz1aO88379 1555 aa9.71□□□□□ -0.85
Cdc27-201ENSMUST00000093923 BicraF8VPZ9 1578 aa9.66□□□□□ -0.86
Cdc27-201ENSMUST00000093923 HrcG5E8J6 738 aa9.6□□□□□ -0.87
Cdc27-201ENSMUST00000093923 Rpgrip1Q9EPQ2 1331 aa9.59□□□□□ -0.87
Cdc27-201ENSMUST00000093923 Smarca2Q6DIC0 1577 aa9.59□□□□□ -0.88
Cdc27-201ENSMUST00000093923 Acin1Q9JIX8 1338 aaKnown RBP9.58□□□□□ -0.88
Cdc27-201ENSMUST00000093923 Crybg2B7ZCC2 1516 aa9.52□□□□□ -0.89
Cdc27-201ENSMUST00000093923 NacadQ5SWP3 1504 aa9.51□□□□□ -0.89
Cdc27-201ENSMUST00000093923 Ccdc136Q3TVA9 1136 aa9.45□□□□□ -0.9
Cdc27-201ENSMUST00000093923 Ehmt2Q9Z148 1263 aaKnown RBP9.4□□□□□ -0.9
Cdc27-201ENSMUST00000093923 Sycp2Q9CUU3 1500 aa9.37□□□□□ -0.91
Cdc27-201ENSMUST00000093923 Cep164Q5DU05 1446 aa9.37□□□□□ -0.91
Cdc27-201ENSMUST00000093923 Trim41Q5NCC3 630 aa9.3□□□□□ -0.92
Cdc27-201ENSMUST00000093923 Rsf1E9PWW9 1441 aaKnown RBP9.3□□□□□ -0.92
Cdc27-201ENSMUST00000093923 Cecr2E9Q2Z1 1453 aa9.29□□□□□ -0.92
Cdc27-201ENSMUST00000093923 Pcgf6Q99NA9 353 aa9.29□□□□□ -0.92
Cdc27-201ENSMUST00000093923 Synj1Q8CHC4 1574 aa9.24□□□□□ -0.93
Cdc27-201ENSMUST00000093923 Ccdc88bQ4QRL3 1481 aa9.24□□□□□ -0.93
Cdc27-201ENSMUST00000093923 Top2bQ64511 1612 aa9.23□□□□□ -0.93
Cdc27-201ENSMUST00000093923 Unc13aQ4KUS2 1712 aa9.21□□□□□ -0.94
Cdc27-201ENSMUST00000093923 Thoc2B1AZI6 1594 aaKnown RBP9.21□□□□□ -0.94
Cdc27-201ENSMUST00000093923 Chic1Q8CBW7 227 aa9.21□□□□□ -0.94
Cdc27-201ENSMUST00000093923 Dnajc5bQ9CQ94 199 aa9.14□□□□□ -0.95
Cdc27-201ENSMUST00000093923 Golga3P55937 1487 aa9.13□□□□□ -0.95
Cdc27-201ENSMUST00000093923 Supt5hO55201 1082 aaKnown RBP9.11□□□□□ -0.95
Cdc27-201ENSMUST00000093923 Brd4Q9ESU6 1400 aaKnown RBP9.11□□□□□ -0.95
Cdc27-201ENSMUST00000093923 CftrP26361 1476 aa9.11□□□□□ -0.95
Cdc27-201ENSMUST00000093923 Cc2d2aQ8CFW7 1633 aa9.1□□□□□ -0.95
Cdc27-201ENSMUST00000093923 Cttnbp2B9EJA2 1648 aa9.07□□□□□ -0.96
Cdc27-201ENSMUST00000093923 Eif4g1Q6NZJ6 1600 aaKnown RBP9.02□□□□□ -0.97
Cdc27-201ENSMUST00000093923 Rapgef2Q8CHG7 1496 aa8.99□□□□□ -0.97
Cdc27-201ENSMUST00000093923 Top2aQ01320 1528 aaKnown RBP8.98□□□□□ -0.97
Cdc27-201ENSMUST00000093923 Smarca4Q3TKT4 1613 aaKnown RBP8.96□□□□□ -0.97
Cdc27-201ENSMUST00000093923 Neurod1Q60867 357 aa8.96□□□□□ -0.98
Cdc27-201ENSMUST00000093923 Mier1Q5UAK0 511 aa8.94□□□□□ -0.98
Cdc27-201ENSMUST00000093923 Cngb1E1AZ71 1325 aa8.92□□□□□ -0.98
Cdc27-201ENSMUST00000093923 Gab3Q8BSM5 595 aa8.91□□□□□ -0.98
Cdc27-201ENSMUST00000093923 TnnQ80Z71 1560 aa8.88□□□□□ -0.99
Cdc27-201ENSMUST00000093923 Sall2Q9QX96 1004 aa8.87□□□□□ -0.99
Cdc27-201ENSMUST00000093923 Fmn1Q05860 1466 aa8.87□□□□□ -0.99
Cdc27-201ENSMUST00000093923 Iqgap2Q3UQ44 1575 aa8.84□□□□□ -1
Cdc27-201ENSMUST00000093923 Kdm5bQ80Y84 1544 aa8.83□□□□□ -1
Cdc27-201ENSMUST00000093923 Cep162Q6ZQ06 1403 aa8.83□□□□□ -1
Cdc27-201ENSMUST00000093923 NefmP08553 848 aa8.79□□□□□ -1
Cdc27-201ENSMUST00000093923 Aebp2Q9Z248 504 aaKnown RBP8.79□□□□□ -1
Cdc27-201ENSMUST00000093923 Ncapd3Q6ZQK0 1506 aa8.79□□□□□ -1
Cdc27-201ENSMUST00000093923 Zeb1Q64318 1117 aa8.78□□□□□ -1
Cdc27-201ENSMUST00000093923 PtprkP35822 1457 aa8.74□□□□□ -1.01
Cdc27-201ENSMUST00000093923 Arhgap35Q91YM2 1499 aa8.73□□□□□ -1.01
Cdc27-201ENSMUST00000093923 Fam135aQ6NS59 1506 aa8.73□□□□□ -1.01
Cdc27-201ENSMUST00000093923 NrkQ9R0G8 1455 aa8.71□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Arap1Q4LDD4 1452 aa8.7□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Lamc3Q9R0B6 1581 aa8.69□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Setd1bQ8CFT2 1985 aa8.67□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Anks4bQ8K3X6 423 aa8.67□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Atad2bE9Q166 1460 aaKnown RBP8.67□□□□□ -1.02
Cdc27-201ENSMUST00000093923 TchhA0A0B4J1F9 1599 aa8.67□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Frmpd1A2AKB4 1549 aa8.67□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Wdr62Q3U3T8 1523 aa8.67□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Esf1Q3V1V3 845 aaKnown RBP8.66□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Camsap1A2AHC3 1581 aa8.66□□□□□ -1.02
Cdc27-201ENSMUST00000093923 1700123L14RikQ3V2K7 440 aa8.66□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Erich3F6QRE9 1637 aa8.66□□□□□ -1.02
Cdc27-201ENSMUST00000093923 Arhgef5E9Q7D5 1581 aa8.65□□□□□ -1.02
Cdc27-201ENSMUST00000093923 UbtfP25976 765 aaKnown RBP8.63□□□□□ -1.03
Cdc27-201ENSMUST00000093923 Csrnp3P59055 597 aa8.62□□□□□ -1.03
Cdc27-201ENSMUST00000093923 AqrQ8CFQ3 1481 aaKnown RBP8.61□□□□□ -1.03
Cdc27-201ENSMUST00000093923 Lmo7E9PYF4 1699 aaKnown RBP8.61□□□□□ -1.03
Cdc27-201ENSMUST00000093923 Ankrd26Q811D2 1581 aa8.6□□□□□ -1.03
Cdc27-201ENSMUST00000093923 Tiam1Q60610 1591 aa8.59□□□□□ -1.03
Cdc27-201ENSMUST00000093923 Shroom4Q1W617 1475 aa8.59□□□□□ -1.03
Cdc27-201ENSMUST00000093923 Map3k1P53349 1493 aa8.58□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Slx4Q6P1D7 1565 aa8.58□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Clip1Q922J3 1391 aa8.58□□□□□ -1.04
Cdc27-201ENSMUST00000093923 ClspnQ80YR7 1315 aa8.58□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Plekhg3Q4VAC9 1341 aa8.55□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Pcf11G3X9Z4 1553 aa8.54□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Ccdc18Q640L5 1455 aa8.54□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Mroh2bQ7M6Y6 1581 aa8.54□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Grin2bQ01097 1482 aa8.53□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Ppargc1bQ8VHJ7 1014 aa8.53□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Naip1Q9QWK5 1403 aa8.53□□□□□ -1.04
Cdc27-201ENSMUST00000093923 Pds5bQ4VA53 1446 aaKnown RBP8.52□□□□□ -1.05
Cdc27-201ENSMUST00000093923 3425401B19RikD3Z1D3 1412 aa8.52□□□□□ -1.05
Cdc27-201ENSMUST00000093923 Eea1Q8BL66 1411 aa8.51□□□□□ -1.05
Cdc27-201ENSMUST00000093923 TonslQ6NZL6 1363 aa8.5□□□□□ -1.05
Cdc27-201ENSMUST00000093923 Myt1lP97500 1187 aa8.5□□□□□ -1.05
Cdc27-201ENSMUST00000093923 Dennd4bQ3U1Y4 1499 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms