RNA–Protein interactions for RNA: ENSMUST00000088310.9

Phf3-201, Transcript of PHD finger protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Phf3, Length 7,561 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Phf3-201ENSMUST00000088310 Rhox8Q6VSS7 320 aa14.84□□□□□ -0.03
Phf3-201ENSMUST00000088310 Ccdc136Q3TVA9 1136 aa13.46□□□□□ -0.25
Phf3-201ENSMUST00000088310 Esf1Q3V1V3 845 aaKnown RBP13.38□□□□□ -0.27
Phf3-201ENSMUST00000088310 Cngb1E1AZ71 1325 aa13.36□□□□□ -0.27
Phf3-201ENSMUST00000088310 Ehmt2Q9Z148 1263 aaKnown RBP13.34□□□□□ -0.27
Phf3-201ENSMUST00000088310 Gm35339A0A140LHH9 1649 aa13.31□□□□□ -0.28
Phf3-201ENSMUST00000088310 Abcc9P70170 1546 aa13.22□□□□□ -0.29
Phf3-201ENSMUST00000088310 Zeb1Q64318 1117 aa13.13□□□□□ -0.31
Phf3-201ENSMUST00000088310 NischQ80TM9 1593 aa13.11□□□□□ -0.31
Phf3-201ENSMUST00000088310 Gab3Q8BSM5 595 aa13.07□□□□□ -0.32
Phf3-201ENSMUST00000088310 Il27Q8K3I6 234 aa12.91□□□□□ -0.34
Phf3-201ENSMUST00000088310 Myt1lP97500 1187 aa12.9□□□□□ -0.34
Phf3-201ENSMUST00000088310 Npm2Q80W85 207 aa12.89□□□□□ -0.35
Phf3-201ENSMUST00000088310 Ube2uB1AUC4 352 aa12.88□□□□□ -0.35
Phf3-201ENSMUST00000088310 Plppr3Q7TPB0 716 aa12.71□□□□□ -0.37
Phf3-201ENSMUST00000088310 Ifnlr1Q8CGK5 535 aa12.67□□□□□ -0.38
Phf3-201ENSMUST00000088310 Ap3b1Q9Z1T1 1105 aa12.57□□□□□ -0.4
Phf3-201ENSMUST00000088310 Pelp1Q9DBD5 1123 aaKnown RBP12.49□□□□□ -0.41
Phf3-201ENSMUST00000088310 Zcchc6Q5BLK4 1491 aaKnown RBP12.45□□□□□ -0.42
Phf3-201ENSMUST00000088310 Trim41Q5NCC3 630 aa12.44□□□□□ -0.42
Phf3-201ENSMUST00000088310 Zbtb7cQ8VCZ7 619 aa12.38□□□□□ -0.43
Phf3-201ENSMUST00000088310 Wdr66E9Q743 1299 aa12.31□□□□□ -0.44
Phf3-201ENSMUST00000088310 UbtfP25976 765 aaKnown RBP12.27□□□□□ -0.45
Phf3-201ENSMUST00000088310 Ttbk1Q6PCN3 1308 aa12.25□□□□□ -0.45
Phf3-201ENSMUST00000088310 Fkbp15Q6P9Q6 1216 aaKnown RBP12.24□□□□□ -0.45
Phf3-201ENSMUST00000088310 Rpgrip1Q9EPQ2 1331 aa12.18□□□□□ -0.46
Phf3-201ENSMUST00000088310 Slc24a1Q91WD8 1130 aa12.18□□□□□ -0.46
Phf3-201ENSMUST00000088310 Neurod1Q60867 357 aa12.11□□□□□ -0.47
Phf3-201ENSMUST00000088310 Chic1Q8CBW7 227 aa12.11□□□□□ -0.47
Phf3-201ENSMUST00000088310 4930567H17RikQ3V0K5 233 aa12.1□□□□□ -0.47
Phf3-201ENSMUST00000088310 Npm1Q61937 292 aaKnown RBP12.05□□□□□ -0.48
Phf3-201ENSMUST00000088310 Gm13697A2AK42 830 aa12.01□□□□□ -0.49
Phf3-201ENSMUST00000088310 Lmod2Q3UHZ5 550 aa12□□□□□ -0.49
Phf3-201ENSMUST00000088310 Ubl4bQ9CQ84 188 aa12□□□□□ -0.49
Phf3-201ENSMUST00000088310 Fam50aQ9WV03 339 aaKnown RBP12□□□□□ -0.49
Phf3-201ENSMUST00000088310 Os9Q8K2C7 672 aa11.99□□□□□ -0.49
Phf3-201ENSMUST00000088310 HrcG5E8J6 738 aa11.98□□□□□ -0.49
Phf3-201ENSMUST00000088310 Zbtb4Q5F293 982 aa11.98□□□□□ -0.49
Phf3-201ENSMUST00000088310 Ppargc1bQ8VHJ7 1014 aa11.96□□□□□ -0.5
Phf3-201ENSMUST00000088310 Las1lA2BE28 776 aaKnown RBP11.94□□□□□ -0.5
Phf3-201ENSMUST00000088310 Hnrnpul2Q00PI9 745 aaKnown RBP11.93□□□□□ -0.5
Phf3-201ENSMUST00000088310 Ccdc180J3QNE4 1664 aa11.9□□□□□ -0.5
Phf3-201ENSMUST00000088310 Abcc8B2RUS7 1588 aa11.89□□□□□ -0.51
Phf3-201ENSMUST00000088310 Prdm10Q3UTQ7 1184 aa11.88□□□□□ -0.51
Phf3-201ENSMUST00000088310 Erich6D3Z6S9 713 aa11.86□□□□□ -0.51
Phf3-201ENSMUST00000088310 Atp1b4Q99ME6 356 aa11.86□□□□□ -0.51
Phf3-201ENSMUST00000088310 Plekhg3Q4VAC9 1341 aa11.74□□□□□ -0.53
Phf3-201ENSMUST00000088310 Gm13695A2AK44 830 aa11.71□□□□□ -0.53
Phf3-201ENSMUST00000088310 Safb2Q80YR5 991 aaKnown RBP11.68□□□□□ -0.54
Phf3-201ENSMUST00000088310 DiexfQ8BTT6 772 aaKnown RBP11.68□□□□□ -0.54
Phf3-201ENSMUST00000088310 Amer1Q7TS75 1132 aa11.67□□□□□ -0.54
Phf3-201ENSMUST00000088310 Rb1cc1Q9ESK9 1588 aa11.66□□□□□ -0.54
Phf3-201ENSMUST00000088310 MyclP10166 368 aa11.66□□□□□ -0.54
Phf3-201ENSMUST00000088310 P3h3Q8CG70 732 aa11.58□□□□□ -0.56
Phf3-201ENSMUST00000088310 Cdk11bP24788 784 aaKnown RBP11.55□□□□□ -0.56
Phf3-201ENSMUST00000088310 Ecm2Q5FW85 670 aa11.53□□□□□ -0.56
Phf3-201ENSMUST00000088310 Mapk8ip2Q9ERE9 830 aa11.52□□□□□ -0.57
Phf3-201ENSMUST00000088310 Arhgap27A2AB59 869 aa11.5□□□□□ -0.57
Phf3-201ENSMUST00000088310 NclP09405 707 aaKnown RBP11.49□□□□□ -0.57
Phf3-201ENSMUST00000088310 Ppp1r18Q8BQ30 594 aa11.49□□□□□ -0.57
Phf3-201ENSMUST00000088310 Rangap1P46061 589 aaKnown RBP11.48□□□□□ -0.57
Phf3-201ENSMUST00000088310 Eif5bQ05D44 1216 aaKnown RBP11.47□□□□□ -0.57
Phf3-201ENSMUST00000088310 MlecQ6ZQI3 291 aaKnown RBP11.46□□□□□ -0.57
Phf3-201ENSMUST00000088310 Chic2Q9D9G3 165 aa11.46□□□□□ -0.58
Phf3-201ENSMUST00000088310 Ercc6F8VPZ5 1481 aa11.45□□□□□ -0.58
Phf3-201ENSMUST00000088310 NacadQ5SWP3 1504 aa11.4□□□□□ -0.58
Phf3-201ENSMUST00000088310 Kif15Q6P9L6 1387 aa11.39□□□□□ -0.59
Phf3-201ENSMUST00000088310 Kdm5dQ62240 1548 aa11.38□□□□□ -0.59
Phf3-201ENSMUST00000088310 Ubap1lG3UW59 384 aa11.37□□□□□ -0.59
Phf3-201ENSMUST00000088310 Rtl1Q7M732 1744 aa11.36□□□□□ -0.59
Phf3-201ENSMUST00000088310 Eid3Q3V124 375 aa11.36□□□□□ -0.59
Phf3-201ENSMUST00000088310 Anp32bQ9EST5 272 aaKnown RBP11.34□□□□□ -0.59
Phf3-201ENSMUST00000088310 Arid3cA6PWV5 409 aa11.33□□□□□ -0.6
Phf3-201ENSMUST00000088310 NgefQ8CHT1 710 aa11.31□□□□□ -0.6
Phf3-201ENSMUST00000088310 Irx6Q9ER75 438 aa11.3□□□□□ -0.6
Phf3-201ENSMUST00000088310 Brd4Q9ESU6 1400 aaKnown RBP11.27□□□□□ -0.6
Phf3-201ENSMUST00000088310 Polr3glQ8R0C0 218 aa11.27□□□□□ -0.61
Phf3-201ENSMUST00000088310 AknaQ80VW7 1404 aa11.24□□□□□ -0.61
Phf3-201ENSMUST00000088310 Mier1Q5UAK0 511 aa11.24□□□□□ -0.61
Phf3-201ENSMUST00000088310 Stra8P70278 393 aa11.16□□□□□ -0.62
Phf3-201ENSMUST00000088310 Nlrp6Q91WS2 869 aa11.16□□□□□ -0.62
Phf3-201ENSMUST00000088310 Clip1Q922J3 1391 aa11.16□□□□□ -0.62
Phf3-201ENSMUST00000088310 Ggt6Q6PDE7 497 aa11.14□□□□□ -0.63
Phf3-201ENSMUST00000088310 NrdcQ8BHG1 1161 aa11.14□□□□□ -0.63
Phf3-201ENSMUST00000088310 Stk24Q99KH8 431 aa11.13□□□□□ -0.63
Phf3-201ENSMUST00000088310 Slc4a1apE9PX68 744 aa11.12□□□□□ -0.63
Phf3-201ENSMUST00000088310 Rsf1E9PWW9 1441 aaKnown RBP11.12□□□□□ -0.63
Phf3-201ENSMUST00000088310 TonslQ6NZL6 1363 aa11.1□□□□□ -0.63
Phf3-201ENSMUST00000088310 Dcaf1Q80TR8 1506 aa11.1□□□□□ -0.63
Phf3-201ENSMUST00000088310 Kdm2aP59997 1161 aa11.1□□□□□ -0.63
Phf3-201ENSMUST00000088310 BlmO88700 1416 aa11.08□□□□□ -0.64
Phf3-201ENSMUST00000088310 Pip4k2bQ80XI4 416 aa11.08□□□□□ -0.64
Phf3-201ENSMUST00000088310 Cep164Q5DU05 1446 aa11.07□□□□□ -0.64
Phf3-201ENSMUST00000088310 Znf326O88291 580 aa11.07□□□□□ -0.64
Phf3-201ENSMUST00000088310 Baz1aO88379 1555 aa11.07□□□□□ -0.64
Phf3-201ENSMUST00000088310 Rrp7aQ9D1C9 280 aaKnown RBP11.07□□□□□ -0.64
Phf3-201ENSMUST00000088310 Hdac5Q9Z2V6 1113 aa11.07□□□□□ -0.64
Phf3-201ENSMUST00000088310 Ccdc18Q640L5 1455 aa11.05□□□□□ -0.64
Phf3-201ENSMUST00000088310 Dnajc5bQ9CQ94 199 aa11.04□□□□□ -0.64
Phf3-201ENSMUST00000088310 NeflP08551 543 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 129.5 ms