RNA–Protein interactions for RNA: ENSMUST00000087258.9

Tro-202, Transcript of Tro protein, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tro, Length 6,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-202ENSMUST00000087258 Rhox8Q6VSS7 320 aa19.49■□□□□ 0.71
Tro-202ENSMUST00000087258 Ehmt2Q9Z148 1263 aaKnown RBP17.99■□□□□ 0.47
Tro-202ENSMUST00000087258 Ube2uB1AUC4 352 aa17.65■□□□□ 0.42
Tro-202ENSMUST00000087258 Wdr66E9Q743 1299 aa17.59■□□□□ 0.41
Tro-202ENSMUST00000087258 Cngb1E1AZ71 1325 aa17.42■□□□□ 0.38
Tro-202ENSMUST00000087258 Pelp1Q9DBD5 1123 aaKnown RBP17.37■□□□□ 0.37
Tro-202ENSMUST00000087258 Las1lA2BE28 776 aaKnown RBP17.29■□□□□ 0.36
Tro-202ENSMUST00000087258 Esf1Q3V1V3 845 aaKnown RBP17.28■□□□□ 0.36
Tro-202ENSMUST00000087258 Zeb1Q64318 1117 aa17.27■□□□□ 0.35
Tro-202ENSMUST00000087258 Amer1Q7TS75 1132 aa17.22■□□□□ 0.35
Tro-202ENSMUST00000087258 Rpgrip1Q9EPQ2 1331 aa17.19■□□□□ 0.34
Tro-202ENSMUST00000087258 Ccdc136Q3TVA9 1136 aa17.12■□□□□ 0.33
Tro-202ENSMUST00000087258 Gab3Q8BSM5 595 aa17.1■□□□□ 0.33
Tro-202ENSMUST00000087258 Npm2Q80W85 207 aa17.02■□□□□ 0.32
Tro-202ENSMUST00000087258 Myt1lP97500 1187 aa16.94■□□□□ 0.3
Tro-202ENSMUST00000087258 Slc24a1Q91WD8 1130 aa16.85■□□□□ 0.29
Tro-202ENSMUST00000087258 Ttbk1Q6PCN3 1308 aa16.61■□□□□ 0.25
Tro-202ENSMUST00000087258 UbtfP25976 765 aaKnown RBP16.46■□□□□ 0.23
Tro-202ENSMUST00000087258 4930567H17RikQ3V0K5 233 aa16.46■□□□□ 0.23
Tro-202ENSMUST00000087258 CenpbP27790 599 aa16.42■□□□□ 0.22
Tro-202ENSMUST00000087258 Trim41Q5NCC3 630 aa16.34■□□□□ 0.21
Tro-202ENSMUST00000087258 4933416C03RikQ3V063 378 aa16.3■□□□□ 0.2
Tro-202ENSMUST00000087258 Neurod1Q60867 357 aa16.27■□□□□ 0.19
Tro-202ENSMUST00000087258 Os9Q8K2C7 672 aa16.23■□□□□ 0.19
Tro-202ENSMUST00000087258 Il27Q8K3I6 234 aa16.21■□□□□ 0.18
Tro-202ENSMUST00000087258 Eif5bQ05D44 1216 aaKnown RBP16.19■□□□□ 0.18
Tro-202ENSMUST00000087258 Stra8P70278 393 aa16.18■□□□□ 0.18
Tro-202ENSMUST00000087258 Ap3b1Q9Z1T1 1105 aa16.13■□□□□ 0.17
Tro-202ENSMUST00000087258 Ppargc1bQ8VHJ7 1014 aa16.06■□□□□ 0.16
Tro-202ENSMUST00000087258 NrdcQ8BHG1 1161 aa16.01■□□□□ 0.15
Tro-202ENSMUST00000087258 NeflP08551 543 aa15.99■□□□□ 0.15
Tro-202ENSMUST00000087258 Chic1Q8CBW7 227 aa15.99■□□□□ 0.15
Tro-202ENSMUST00000087258 Fam50aQ9WV03 339 aaKnown RBP15.99■□□□□ 0.15
Tro-202ENSMUST00000087258 HrcG5E8J6 738 aa15.97■□□□□ 0.15
Tro-202ENSMUST00000087258 Zbtb7cQ8VCZ7 619 aa15.94■□□□□ 0.14
Tro-202ENSMUST00000087258 Anp32bQ9EST5 272 aaKnown RBP15.92■□□□□ 0.14
Tro-202ENSMUST00000087258 NefmP08553 848 aa15.9■□□□□ 0.14
Tro-202ENSMUST00000087258 NclP09405 707 aaKnown RBP15.88■□□□□ 0.13
Tro-202ENSMUST00000087258 Cdk11bP24788 784 aaKnown RBP15.83■□□□□ 0.12
Tro-202ENSMUST00000087258 Gm13697A2AK42 830 aa15.78■□□□□ 0.12
Tro-202ENSMUST00000087258 Acin1Q9JIX8 1338 aaKnown RBP15.78■□□□□ 0.12
Tro-202ENSMUST00000087258 Ifnlr1Q8CGK5 535 aa15.77■□□□□ 0.11
Tro-202ENSMUST00000087258 Zbtb4Q5F293 982 aa15.72■□□□□ 0.11
Tro-202ENSMUST00000087258 Prdm10Q3UTQ7 1184 aa15.69■□□□□ 0.1
Tro-202ENSMUST00000087258 Plppr3Q7TPB0 716 aa15.69■□□□□ 0.1
Tro-202ENSMUST00000087258 Atp1b4Q99ME6 356 aa15.64■□□□□ 0.09
Tro-202ENSMUST00000087258 Hnrnpul2Q00PI9 745 aaKnown RBP15.63■□□□□ 0.09
Tro-202ENSMUST00000087258 Nop58Q6DFW4 536 aaKnown RBP15.6■□□□□ 0.09
Tro-202ENSMUST00000087258 ArxO35085 564 aa15.6■□□□□ 0.09
Tro-202ENSMUST00000087258 Polr3glQ8R0C0 218 aa15.58■□□□□ 0.08
Tro-202ENSMUST00000087258 Myt1Q8CFC2 1127 aa15.54■□□□□ 0.08
Tro-202ENSMUST00000087258 Tnnt3Q9QZ47 272 aa15.54■□□□□ 0.08
Tro-202ENSMUST00000087258 Erich6D3Z6S9 713 aa15.54■□□□□ 0.08
Tro-202ENSMUST00000087258 Rangap1P46061 589 aaKnown RBP15.47■□□□□ 0.07
Tro-202ENSMUST00000087258 DiexfQ8BTT6 772 aaKnown RBP15.46■□□□□ 0.07
Tro-202ENSMUST00000087258 Gm13695A2AK44 830 aa15.46■□□□□ 0.06
Tro-202ENSMUST00000087258 DaxxO35613 739 aa15.44■□□□□ 0.06
Tro-202ENSMUST00000087258 Nlrp6Q91WS2 869 aa15.44■□□□□ 0.06
Tro-202ENSMUST00000087258 Lmod2Q3UHZ5 550 aa15.41■□□□□ 0.06
Tro-202ENSMUST00000087258 TonslQ6NZL6 1363 aa15.39■□□□□ 0.05
Tro-202ENSMUST00000087258 Pcgf6Q99NA9 353 aa15.38■□□□□ 0.05
Tro-202ENSMUST00000087258 CatipB9EKE5 520 aa15.37■□□□□ 0.05
Tro-202ENSMUST00000087258 Ythdc1E9Q5K9 736 aaKnown RBP15.34■□□□□ 0.05
Tro-202ENSMUST00000087258 Mapk8ip2Q9ERE9 830 aa15.34■□□□□ 0.05
Tro-202ENSMUST00000087258 Csrnp3P59055 597 aa15.28■□□□□ 0.04
Tro-202ENSMUST00000087258 Supt5hO55201 1082 aaKnown RBP15.26■□□□□ 0.03
Tro-202ENSMUST00000087258 Fkbp15Q6P9Q6 1216 aaKnown RBP15.26■□□□□ 0.03
Tro-202ENSMUST00000087258 Lmod3E9QA62 571 aa15.2■□□□□ 0.02
Tro-202ENSMUST00000087258 Gm38655A0A286YDK6 273 aa15.19■□□□□ 0.02
Tro-202ENSMUST00000087258 Gm35339A0A140LHH9 1649 aa15.18■□□□□ 0.02
Tro-202ENSMUST00000087258 Plekhg3Q4VAC9 1341 aa15.16■□□□□ 0.02
Tro-202ENSMUST00000087258 NischQ80TM9 1593 aa15.14■□□□□ 0.01
Tro-202ENSMUST00000087258 Vsig10D3YX43 558 aa15.14■□□□□ 0.01
Tro-202ENSMUST00000087258 Zcchc6Q5BLK4 1491 aaKnown RBP15.12■□□□□ 0.01
Tro-202ENSMUST00000087258 Rtl5Q5DTT4 599 aa15.11■□□□□ 0.01
Tro-202ENSMUST00000087258 Mier1Q5UAK0 511 aa15.11■□□□□ 0.01
Tro-202ENSMUST00000087258 Hsp90aa1P07901 733 aaKnown RBP15.11■□□□□ 0.01
Tro-202ENSMUST00000087258 Npm1Q61937 292 aaKnown RBP15.09■□□□□ 0.01
Tro-202ENSMUST00000087258 Upf2A2AT37 1269 aaKnown RBP15.06■□□□□ 0
Tro-202ENSMUST00000087258 Irx6Q9ER75 438 aa15.04■□□□□ -0
Tro-202ENSMUST00000087258 Anp32aO35381 247 aa15.02■□□□□ -0
Tro-202ENSMUST00000087258 Ccdc180J3QNE4 1664 aa15.02□□□□□ -0.01
Tro-202ENSMUST00000087258 Rad21Q61550 635 aaKnown RBP14.99□□□□□ -0.01
Tro-202ENSMUST00000087258 DekQ7TNV0 380 aaKnown RBP14.98□□□□□ -0.01
Tro-202ENSMUST00000087258 Safb2Q80YR5 991 aaKnown RBP14.97□□□□□ -0.01
Tro-202ENSMUST00000087258 Abcc9P70170 1546 aa14.96□□□□□ -0.01
Tro-202ENSMUST00000087258 Trim26Q99PN3 545 aa14.94□□□□□ -0.02
Tro-202ENSMUST00000087258 Eid3Q3V124 375 aa14.94□□□□□ -0.02
Tro-202ENSMUST00000087258 P3h3Q8CG70 732 aa14.93□□□□□ -0.02
Tro-202ENSMUST00000087258 Znf326O88291 580 aa14.89□□□□□ -0.03
Tro-202ENSMUST00000087258 Fgd1P52734 960 aa14.88□□□□□ -0.03
Tro-202ENSMUST00000087258 Clstn1Q9EPL2 979 aa14.86□□□□□ -0.03
Tro-202ENSMUST00000087258 Arid4bA2CG63 1314 aaKnown RBP14.85□□□□□ -0.03
Tro-202ENSMUST00000087258 Rtn4Q99P72 1162 aaKnown RBP14.83□□□□□ -0.04
Tro-202ENSMUST00000087258 Ppp4r2Q0VGB7 417 aa14.81□□□□□ -0.04
Tro-202ENSMUST00000087258 Hdac5Q9Z2V6 1113 aa14.81□□□□□ -0.04
Tro-202ENSMUST00000087258 ClspnQ80YR7 1315 aa14.8□□□□□ -0.04
Tro-202ENSMUST00000087258 Chic2Q9D9G3 165 aa14.71□□□□□ -0.05
Tro-202ENSMUST00000087258 Rtl1Q7M732 1744 aa14.64□□□□□ -0.07
Tro-202ENSMUST00000087258 Calr4Q3TQS0 420 aa14.63□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 79.5 ms