RNA–Protein interactions for RNA: ENSMUST00000079391.9

Cald1-202, Transcript of Caldesmon 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cald1, Length 4,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cald1-202ENSMUST00000079391 NischQ80TM9 1593 aa16.63■□□□□ 0.25
Cald1-202ENSMUST00000079391 Rhox8Q6VSS7 320 aa16.45■□□□□ 0.22
Cald1-202ENSMUST00000079391 Gm35339A0A140LHH9 1649 aa16.24■□□□□ 0.19
Cald1-202ENSMUST00000079391 Abcc9P70170 1546 aa15.99■□□□□ 0.15
Cald1-202ENSMUST00000079391 Abcc8B2RUS7 1588 aa15.88■□□□□ 0.13
Cald1-202ENSMUST00000079391 Rtl1Q7M732 1744 aa15.48■□□□□ 0.07
Cald1-202ENSMUST00000079391 Ccdc180J3QNE4 1664 aa15.41■□□□□ 0.06
Cald1-202ENSMUST00000079391 Rpgrip1Q9EPQ2 1331 aa15.4■□□□□ 0.06
Cald1-202ENSMUST00000079391 Ehmt2Q9Z148 1263 aaKnown RBP15.16■□□□□ 0.02
Cald1-202ENSMUST00000079391 Ccdc136Q3TVA9 1136 aa15.11■□□□□ 0.01
Cald1-202ENSMUST00000079391 ScribQ80U72 1612 aa15.04■□□□□ -0
Cald1-202ENSMUST00000079391 Acin1Q9JIX8 1338 aaKnown RBP14.98□□□□□ -0.01
Cald1-202ENSMUST00000079391 HrcG5E8J6 738 aa14.9□□□□□ -0.02
Cald1-202ENSMUST00000079391 NacadQ5SWP3 1504 aa14.9□□□□□ -0.02
Cald1-202ENSMUST00000079391 Trim41Q5NCC3 630 aa14.81□□□□□ -0.04
Cald1-202ENSMUST00000079391 Kdm5dQ62240 1548 aa14.8□□□□□ -0.04
Cald1-202ENSMUST00000079391 Zcchc6Q5BLK4 1491 aaKnown RBP14.78□□□□□ -0.04
Cald1-202ENSMUST00000079391 Rb1cc1Q9ESK9 1588 aa14.59□□□□□ -0.07
Cald1-202ENSMUST00000079391 Dcaf1Q80TR8 1506 aa14.58□□□□□ -0.08
Cald1-202ENSMUST00000079391 Pcgf6Q99NA9 353 aa14.52□□□□□ -0.08
Cald1-202ENSMUST00000079391 Sycp2Q9CUU3 1500 aa14.52□□□□□ -0.09
Cald1-202ENSMUST00000079391 Cngb1E1AZ71 1325 aa14.51□□□□□ -0.09
Cald1-202ENSMUST00000079391 Gab3Q8BSM5 595 aa14.48□□□□□ -0.09
Cald1-202ENSMUST00000079391 Baz1aO88379 1555 aa14.37□□□□□ -0.11
Cald1-202ENSMUST00000079391 Zeb1Q64318 1117 aa14.32□□□□□ -0.12
Cald1-202ENSMUST00000079391 Esf1Q3V1V3 845 aaKnown RBP14.27□□□□□ -0.13
Cald1-202ENSMUST00000079391 Cep164Q5DU05 1446 aa14.27□□□□□ -0.13
Cald1-202ENSMUST00000079391 Supt5hO55201 1082 aaKnown RBP14.26□□□□□ -0.13
Cald1-202ENSMUST00000079391 Las1lA2BE28 776 aaKnown RBP14.22□□□□□ -0.13
Cald1-202ENSMUST00000079391 NefmP08553 848 aa14.17□□□□□ -0.14
Cald1-202ENSMUST00000079391 Chic1Q8CBW7 227 aa14.15□□□□□ -0.14
Cald1-202ENSMUST00000079391 BicraF8VPZ9 1578 aa14.12□□□□□ -0.15
Cald1-202ENSMUST00000079391 Pds5bQ4VA53 1446 aaKnown RBP14.1□□□□□ -0.15
Cald1-202ENSMUST00000079391 Crybg2B7ZCC2 1516 aa14.07□□□□□ -0.16
Cald1-202ENSMUST00000079391 Mier1Q5UAK0 511 aa14.05□□□□□ -0.16
Cald1-202ENSMUST00000079391 Wdr66E9Q743 1299 aa14.02□□□□□ -0.17
Cald1-202ENSMUST00000079391 Brd4Q9ESU6 1400 aaKnown RBP14.01□□□□□ -0.17
Cald1-202ENSMUST00000079391 UbtfP25976 765 aaKnown RBP14□□□□□ -0.17
Cald1-202ENSMUST00000079391 Rsf1E9PWW9 1441 aaKnown RBP13.98□□□□□ -0.17
Cald1-202ENSMUST00000079391 Smarca2Q6DIC0 1577 aa13.97□□□□□ -0.17
Cald1-202ENSMUST00000079391 Myt1lP97500 1187 aa13.96□□□□□ -0.17
Cald1-202ENSMUST00000079391 Atad2bE9Q166 1460 aaKnown RBP13.91□□□□□ -0.18
Cald1-202ENSMUST00000079391 Neurod1Q60867 357 aa13.91□□□□□ -0.18
Cald1-202ENSMUST00000079391 Ercc6F8VPZ5 1481 aa13.9□□□□□ -0.18
Cald1-202ENSMUST00000079391 Dnajc5bQ9CQ94 199 aa13.9□□□□□ -0.18
Cald1-202ENSMUST00000079391 Npm2Q80W85 207 aa13.88□□□□□ -0.19
Cald1-202ENSMUST00000079391 Golga3P55937 1487 aa13.86□□□□□ -0.19
Cald1-202ENSMUST00000079391 Ccdc88bQ4QRL3 1481 aa13.84□□□□□ -0.19
Cald1-202ENSMUST00000079391 Sall2Q9QX96 1004 aa13.83□□□□□ -0.19
Cald1-202ENSMUST00000079391 Cecr2E9Q2Z1 1453 aa13.81□□□□□ -0.2
Cald1-202ENSMUST00000079391 Ubl4bQ9CQ84 188 aa13.79□□□□□ -0.2
Cald1-202ENSMUST00000079391 Smarca4Q3TKT4 1613 aaKnown RBP13.75□□□□□ -0.21
Cald1-202ENSMUST00000079391 CenpbP27790 599 aa13.73□□□□□ -0.21
Cald1-202ENSMUST00000079391 Ppargc1bQ8VHJ7 1014 aa13.71□□□□□ -0.22
Cald1-202ENSMUST00000079391 Cdk11bP24788 784 aaKnown RBP13.68□□□□□ -0.22
Cald1-202ENSMUST00000079391 Iqgap2Q3UQ44 1575 aa13.67□□□□□ -0.22
Cald1-202ENSMUST00000079391 Myt1Q8CFC2 1127 aa13.65□□□□□ -0.22
Cald1-202ENSMUST00000079391 Nop58Q6DFW4 536 aaKnown RBP13.65□□□□□ -0.22
Cald1-202ENSMUST00000079391 Synj1Q8CHC4 1574 aa13.63□□□□□ -0.23
Cald1-202ENSMUST00000079391 DiexfQ8BTT6 772 aaKnown RBP13.63□□□□□ -0.23
Cald1-202ENSMUST00000079391 Phldb1Q6PDH0 1371 aaKnown RBP13.63□□□□□ -0.23
Cald1-202ENSMUST00000079391 TonslQ6NZL6 1363 aa13.61□□□□□ -0.23
Cald1-202ENSMUST00000079391 ClspnQ80YR7 1315 aa13.6□□□□□ -0.23
Cald1-202ENSMUST00000079391 Plekhg3Q4VAC9 1341 aa13.59□□□□□ -0.23
Cald1-202ENSMUST00000079391 CftrP26361 1476 aa13.59□□□□□ -0.23
Cald1-202ENSMUST00000079391 Anks4bQ8K3X6 423 aa13.59□□□□□ -0.23
Cald1-202ENSMUST00000079391 Il27Q8K3I6 234 aa13.58□□□□□ -0.24
Cald1-202ENSMUST00000079391 Aebp2Q9Z248 504 aaKnown RBP13.58□□□□□ -0.24
Cald1-202ENSMUST00000079391 Cc2d2aQ8CFW7 1633 aa13.53□□□□□ -0.24
Cald1-202ENSMUST00000079391 Npm1Q61937 292 aaKnown RBP13.53□□□□□ -0.24
Cald1-202ENSMUST00000079391 Thoc2B1AZI6 1594 aaKnown RBP13.52□□□□□ -0.24
Cald1-202ENSMUST00000079391 Clip1Q922J3 1391 aa13.52□□□□□ -0.25
Cald1-202ENSMUST00000079391 Csrnp3P59055 597 aa13.51□□□□□ -0.25
Cald1-202ENSMUST00000079391 Frmpd1A2AKB4 1549 aa13.51□□□□□ -0.25
Cald1-202ENSMUST00000079391 Ap3b1Q9Z1T1 1105 aa13.51□□□□□ -0.25
Cald1-202ENSMUST00000079391 Amer1Q7TS75 1132 aa13.48□□□□□ -0.25
Cald1-202ENSMUST00000079391 Wdr62Q3U3T8 1523 aa13.46□□□□□ -0.25
Cald1-202ENSMUST00000079391 Kif15Q6P9L6 1387 aa13.45□□□□□ -0.26
Cald1-202ENSMUST00000079391 Cep162Q6ZQ06 1403 aa13.44□□□□□ -0.26
Cald1-202ENSMUST00000079391 Fmn1Q05860 1466 aa13.42□□□□□ -0.26
Cald1-202ENSMUST00000079391 Cttnbp2B9EJA2 1648 aa13.42□□□□□ -0.26
Cald1-202ENSMUST00000079391 1700123L14RikQ3V2K7 440 aa13.41□□□□□ -0.26
Cald1-202ENSMUST00000079391 Rapgef2Q8CHG7 1496 aa13.4□□□□□ -0.26
Cald1-202ENSMUST00000079391 Eid3Q3V124 375 aa13.38□□□□□ -0.27
Cald1-202ENSMUST00000079391 Fam135aQ6NS59 1506 aa13.34□□□□□ -0.27
Cald1-202ENSMUST00000079391 Top2bQ64511 1612 aa13.33□□□□□ -0.27
Cald1-202ENSMUST00000079391 Fam50aQ9WV03 339 aaKnown RBP13.33□□□□□ -0.28
Cald1-202ENSMUST00000079391 Cux2P70298 1426 aa13.31□□□□□ -0.28
Cald1-202ENSMUST00000079391 Ube2uB1AUC4 352 aa13.31□□□□□ -0.28
Cald1-202ENSMUST00000079391 Mrc2Q64449 1479 aa13.29□□□□□ -0.28
Cald1-202ENSMUST00000079391 Aplp2Q06335 707 aa13.29□□□□□ -0.28
Cald1-202ENSMUST00000079391 Gm38655A0A286YDK6 273 aa13.28□□□□□ -0.28
Cald1-202ENSMUST00000079391 NclP09405 707 aaKnown RBP13.27□□□□□ -0.29
Cald1-202ENSMUST00000079391 Top2aQ01320 1528 aaKnown RBP13.25□□□□□ -0.29
Cald1-202ENSMUST00000079391 Tnnt3Q9QZ47 272 aa13.23□□□□□ -0.29
Cald1-202ENSMUST00000079391 Setd5Q5XJV7 1441 aa13.23□□□□□ -0.29
Cald1-202ENSMUST00000079391 Pelp1Q9DBD5 1123 aaKnown RBP13.23□□□□□ -0.29
Cald1-202ENSMUST00000079391 Lmod2Q3UHZ5 550 aa13.22□□□□□ -0.29
Cald1-202ENSMUST00000079391 Mapk8ip2Q9ERE9 830 aa13.22□□□□□ -0.29
Cald1-202ENSMUST00000079391 Eea1Q8BL66 1411 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms