RNA–Protein interactions for RNA: ENSMUST00000074679.3

Sh3rf2-202, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf2, Length 4,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-202ENSMUST00000074679 NischQ80TM9 1593 aa13.74□□□□□ -0.21
Sh3rf2-202ENSMUST00000074679 Rhox8Q6VSS7 320 aa13.25□□□□□ -0.29
Sh3rf2-202ENSMUST00000074679 Gm35339A0A140LHH9 1649 aa13.19□□□□□ -0.3
Sh3rf2-202ENSMUST00000074679 Abcc9P70170 1546 aa13.16□□□□□ -0.3
Sh3rf2-202ENSMUST00000074679 Abcc8B2RUS7 1588 aa12.98□□□□□ -0.33
Sh3rf2-202ENSMUST00000074679 Ccdc136Q3TVA9 1136 aa12.12□□□□□ -0.47
Sh3rf2-202ENSMUST00000074679 NacadQ5SWP3 1504 aa12.1□□□□□ -0.47
Sh3rf2-202ENSMUST00000074679 ScribQ80U72 1612 aa12.05□□□□□ -0.48
Sh3rf2-202ENSMUST00000074679 Dcaf1Q80TR8 1506 aa12.04□□□□□ -0.48
Sh3rf2-202ENSMUST00000074679 Ehmt2Q9Z148 1263 aaKnown RBP12.04□□□□□ -0.48
Sh3rf2-202ENSMUST00000074679 Rb1cc1Q9ESK9 1588 aa12.03□□□□□ -0.48
Sh3rf2-202ENSMUST00000074679 Kdm5dQ62240 1548 aa12□□□□□ -0.49
Sh3rf2-202ENSMUST00000074679 Zcchc6Q5BLK4 1491 aaKnown RBP12□□□□□ -0.49
Sh3rf2-202ENSMUST00000074679 Rtl1Q7M732 1744 aa12□□□□□ -0.49
Sh3rf2-202ENSMUST00000074679 Trim41Q5NCC3 630 aa11.95□□□□□ -0.5
Sh3rf2-202ENSMUST00000074679 Esf1Q3V1V3 845 aaKnown RBP11.85□□□□□ -0.51
Sh3rf2-202ENSMUST00000074679 Baz1aO88379 1555 aa11.84□□□□□ -0.51
Sh3rf2-202ENSMUST00000074679 Rpgrip1Q9EPQ2 1331 aa11.82□□□□□ -0.52
Sh3rf2-202ENSMUST00000074679 Ccdc180J3QNE4 1664 aa11.82□□□□□ -0.52
Sh3rf2-202ENSMUST00000074679 Cngb1E1AZ71 1325 aa11.77□□□□□ -0.52
Sh3rf2-202ENSMUST00000074679 Sycp2Q9CUU3 1500 aa11.73□□□□□ -0.53
Sh3rf2-202ENSMUST00000074679 Crybg2B7ZCC2 1516 aa11.61□□□□□ -0.55
Sh3rf2-202ENSMUST00000074679 Acin1Q9JIX8 1338 aaKnown RBP11.56□□□□□ -0.56
Sh3rf2-202ENSMUST00000074679 Brd4Q9ESU6 1400 aaKnown RBP11.56□□□□□ -0.56
Sh3rf2-202ENSMUST00000074679 HrcG5E8J6 738 aa11.52□□□□□ -0.57
Sh3rf2-202ENSMUST00000074679 Gab3Q8BSM5 595 aa11.44□□□□□ -0.58
Sh3rf2-202ENSMUST00000074679 Smarca2Q6DIC0 1577 aa11.42□□□□□ -0.58
Sh3rf2-202ENSMUST00000074679 Pcgf6Q99NA9 353 aa11.4□□□□□ -0.59
Sh3rf2-202ENSMUST00000074679 Pds5bQ4VA53 1446 aaKnown RBP11.35□□□□□ -0.59
Sh3rf2-202ENSMUST00000074679 Zeb1Q64318 1117 aa11.33□□□□□ -0.6
Sh3rf2-202ENSMUST00000074679 Npm2Q80W85 207 aa11.33□□□□□ -0.6
Sh3rf2-202ENSMUST00000074679 Cecr2E9Q2Z1 1453 aa11.31□□□□□ -0.6
Sh3rf2-202ENSMUST00000074679 BicraF8VPZ9 1578 aa11.3□□□□□ -0.6
Sh3rf2-202ENSMUST00000074679 Il27Q8K3I6 234 aa11.29□□□□□ -0.6
Sh3rf2-202ENSMUST00000074679 Ube2uB1AUC4 352 aa11.26□□□□□ -0.61
Sh3rf2-202ENSMUST00000074679 Ercc6F8VPZ5 1481 aa11.26□□□□□ -0.61
Sh3rf2-202ENSMUST00000074679 Atad2bE9Q166 1460 aaKnown RBP11.24□□□□□ -0.61
Sh3rf2-202ENSMUST00000074679 Smarca4Q3TKT4 1613 aaKnown RBP11.23□□□□□ -0.61
Sh3rf2-202ENSMUST00000074679 Golga3P55937 1487 aa11.22□□□□□ -0.61
Sh3rf2-202ENSMUST00000074679 Myt1lP97500 1187 aa11.21□□□□□ -0.62
Sh3rf2-202ENSMUST00000074679 CftrP26361 1476 aa11.21□□□□□ -0.62
Sh3rf2-202ENSMUST00000074679 Supt5hO55201 1082 aaKnown RBP11.2□□□□□ -0.62
Sh3rf2-202ENSMUST00000074679 Ubl4bQ9CQ84 188 aa11.17□□□□□ -0.62
Sh3rf2-202ENSMUST00000074679 Synj1Q8CHC4 1574 aa11.16□□□□□ -0.62
Sh3rf2-202ENSMUST00000074679 Npm1Q61937 292 aaKnown RBP11.15□□□□□ -0.62
Sh3rf2-202ENSMUST00000074679 Chic1Q8CBW7 227 aa11.15□□□□□ -0.62
Sh3rf2-202ENSMUST00000074679 Cep164Q5DU05 1446 aa11.14□□□□□ -0.63
Sh3rf2-202ENSMUST00000074679 Iqgap2Q3UQ44 1575 aa11.11□□□□□ -0.63
Sh3rf2-202ENSMUST00000074679 Cttnbp2B9EJA2 1648 aa11.11□□□□□ -0.63
Sh3rf2-202ENSMUST00000074679 Rsf1E9PWW9 1441 aaKnown RBP11.1□□□□□ -0.63
Sh3rf2-202ENSMUST00000074679 Kif15Q6P9L6 1387 aa11.07□□□□□ -0.64
Sh3rf2-202ENSMUST00000074679 Las1lA2BE28 776 aaKnown RBP11.02□□□□□ -0.65
Sh3rf2-202ENSMUST00000074679 Wdr66E9Q743 1299 aa11□□□□□ -0.65
Sh3rf2-202ENSMUST00000074679 Phldb1Q6PDH0 1371 aaKnown RBP10.99□□□□□ -0.65
Sh3rf2-202ENSMUST00000074679 Fmn1Q05860 1466 aa10.97□□□□□ -0.65
Sh3rf2-202ENSMUST00000074679 Neurod1Q60867 357 aa10.97□□□□□ -0.65
Sh3rf2-202ENSMUST00000074679 Ccdc88bQ4QRL3 1481 aa10.96□□□□□ -0.66
Sh3rf2-202ENSMUST00000074679 Ccdc18Q640L5 1455 aa10.94□□□□□ -0.66
Sh3rf2-202ENSMUST00000074679 Ppargc1bQ8VHJ7 1014 aa10.92□□□□□ -0.66
Sh3rf2-202ENSMUST00000074679 Frmpd1A2AKB4 1549 aa10.9□□□□□ -0.67
Sh3rf2-202ENSMUST00000074679 UbtfP25976 765 aaKnown RBP10.87□□□□□ -0.67
Sh3rf2-202ENSMUST00000074679 Wdr62Q3U3T8 1523 aa10.86□□□□□ -0.67
Sh3rf2-202ENSMUST00000074679 Cux2P70298 1426 aa10.85□□□□□ -0.67
Sh3rf2-202ENSMUST00000074679 Mier1Q5UAK0 511 aa10.84□□□□□ -0.67
Sh3rf2-202ENSMUST00000074679 NefmP08553 848 aa10.84□□□□□ -0.67
Sh3rf2-202ENSMUST00000074679 Ap3b1Q9Z1T1 1105 aa10.83□□□□□ -0.68
Sh3rf2-202ENSMUST00000074679 Sall2Q9QX96 1004 aa10.8□□□□□ -0.68
Sh3rf2-202ENSMUST00000074679 Top2bQ64511 1612 aa10.77□□□□□ -0.69
Sh3rf2-202ENSMUST00000074679 Cc2d2aQ8CFW7 1633 aa10.77□□□□□ -0.69
Sh3rf2-202ENSMUST00000074679 Clip1Q922J3 1391 aa10.74□□□□□ -0.69
Sh3rf2-202ENSMUST00000074679 Csrnp3P59055 597 aa10.7□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 LrpprcQ6PB66 1392 aaKnown RBP10.7□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Cep162Q6ZQ06 1403 aa10.69□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Plekhg3Q4VAC9 1341 aa10.69□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Top2aQ01320 1528 aaKnown RBP10.67□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Gm38655A0A286YDK6 273 aa10.67□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Cdk11bP24788 784 aaKnown RBP10.66□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Dnajc5bQ9CQ94 199 aa10.66□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Thoc2B1AZI6 1594 aaKnown RBP10.66□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Lamc3Q9R0B6 1581 aa10.66□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Dhx29Q6PGC1 1365 aaKnown RBP10.65□□□□□ -0.7
Sh3rf2-202ENSMUST00000074679 Mrc2Q64449 1479 aa10.65□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Setd5Q5XJV7 1441 aa10.64□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Nop58Q6DFW4 536 aaKnown RBP10.64□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Lmod2Q3UHZ5 550 aa10.64□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Rapgef2Q8CHG7 1496 aa10.63□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Fam135aQ6NS59 1506 aa10.62□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Eea1Q8BL66 1411 aa10.61□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Baz1bQ9Z277 1479 aa10.61□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 CenpbP27790 599 aa10.6□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 1700123L14RikQ3V2K7 440 aa10.6□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Fam50aQ9WV03 339 aaKnown RBP10.59□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Aebp2Q9Z248 504 aaKnown RBP10.59□□□□□ -0.71
Sh3rf2-202ENSMUST00000074679 Camsap1A2AHC3 1581 aa10.58□□□□□ -0.72
Sh3rf2-202ENSMUST00000074679 Pelp1Q9DBD5 1123 aaKnown RBP10.57□□□□□ -0.72
Sh3rf2-202ENSMUST00000074679 Shroom4Q1W617 1475 aa10.57□□□□□ -0.72
Sh3rf2-202ENSMUST00000074679 Efcab5A0JP43 1406 aa10.57□□□□□ -0.72
Sh3rf2-202ENSMUST00000074679 NrkQ9R0G8 1455 aa10.57□□□□□ -0.72
Sh3rf2-202ENSMUST00000074679 Grin2bQ01097 1482 aa10.56□□□□□ -0.72
Sh3rf2-202ENSMUST00000074679 Anks4bQ8K3X6 423 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms