RNA–Protein interactions for RNA: ENSMUST00000065330.7

Clk3-201, Transcript of Dual specificity protein kinase CLK3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk3, Length 2,496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3-201ENSMUST00000065330 NischQ80TM9 1593 aa36.44■■■■□ 3.42
Clk3-201ENSMUST00000065330 Gm35339A0A140LHH9 1649 aa35.63■■■■□ 3.29
Clk3-201ENSMUST00000065330 Abcc9P70170 1546 aa35.36■■■■□ 3.25
Clk3-201ENSMUST00000065330 Abcc8B2RUS7 1588 aa34.57■■■■□ 3.12
Clk3-201ENSMUST00000065330 Rhox8Q6VSS7 320 aa34.04■■■■□ 3.04
Clk3-201ENSMUST00000065330 Rtl1Q7M732 1744 aa33.33■■■□□ 2.93
Clk3-201ENSMUST00000065330 Ccdc180J3QNE4 1664 aa32.83■■■□□ 2.85
Clk3-201ENSMUST00000065330 Zcchc6Q5BLK4 1491 aaKnown RBP32.28■■■□□ 2.76
Clk3-201ENSMUST00000065330 Dcaf1Q80TR8 1506 aa32.18■■■□□ 2.74
Clk3-201ENSMUST00000065330 ScribQ80U72 1612 aa32.16■■■□□ 2.74
Clk3-201ENSMUST00000065330 Rb1cc1Q9ESK9 1588 aa31.93■■■□□ 2.7
Clk3-201ENSMUST00000065330 Kdm5dQ62240 1548 aa31.62■■■□□ 2.65
Clk3-201ENSMUST00000065330 Ccdc136Q3TVA9 1136 aa31.59■■■□□ 2.65
Clk3-201ENSMUST00000065330 Baz1aO88379 1555 aa31.54■■■□□ 2.64
Clk3-201ENSMUST00000065330 HrcG5E8J6 738 aa31.37■■■□□ 2.61
Clk3-201ENSMUST00000065330 NacadQ5SWP3 1504 aa31.31■■■□□ 2.6
Clk3-201ENSMUST00000065330 Rpgrip1Q9EPQ2 1331 aa31.2■■■□□ 2.59
Clk3-201ENSMUST00000065330 Ehmt2Q9Z148 1263 aaKnown RBP30.89■■■□□ 2.54
Clk3-201ENSMUST00000065330 Crybg2B7ZCC2 1516 aa30.88■■■□□ 2.53
Clk3-201ENSMUST00000065330 Trim41Q5NCC3 630 aa30.85■■■□□ 2.53
Clk3-201ENSMUST00000065330 Smarca2Q6DIC0 1577 aa30.84■■■□□ 2.53
Clk3-201ENSMUST00000065330 Acin1Q9JIX8 1338 aaKnown RBP30.84■■■□□ 2.53
Clk3-201ENSMUST00000065330 Sycp2Q9CUU3 1500 aa30.64■■■□□ 2.49
Clk3-201ENSMUST00000065330 Cep164Q5DU05 1446 aa30.41■■■□□ 2.46
Clk3-201ENSMUST00000065330 Cngb1E1AZ71 1325 aa30.17■■■□□ 2.42
Clk3-201ENSMUST00000065330 Cecr2E9Q2Z1 1453 aa30.17■■■□□ 2.42
Clk3-201ENSMUST00000065330 Brd4Q9ESU6 1400 aaKnown RBP30.15■■■□□ 2.42
Clk3-201ENSMUST00000065330 Chic1Q8CBW7 227 aa30.08■■■□□ 2.41
Clk3-201ENSMUST00000065330 Rsf1E9PWW9 1441 aaKnown RBP30.07■■■□□ 2.4
Clk3-201ENSMUST00000065330 BicraF8VPZ9 1578 aa29.96■■■□□ 2.39
Clk3-201ENSMUST00000065330 Synj1Q8CHC4 1574 aa29.9■■■□□ 2.38
Clk3-201ENSMUST00000065330 Gab3Q8BSM5 595 aa29.9■■■□□ 2.38
Clk3-201ENSMUST00000065330 Golga3P55937 1487 aa29.88■■■□□ 2.37
Clk3-201ENSMUST00000065330 Ccdc88bQ4QRL3 1481 aa29.85■■■□□ 2.37
Clk3-201ENSMUST00000065330 CftrP26361 1476 aa29.71■■■□□ 2.35
Clk3-201ENSMUST00000065330 Esf1Q3V1V3 845 aaKnown RBP29.68■■■□□ 2.34
Clk3-201ENSMUST00000065330 Pcgf6Q99NA9 353 aa29.62■■■□□ 2.33
Clk3-201ENSMUST00000065330 Top2bQ64511 1612 aa29.47■■■□□ 2.31
Clk3-201ENSMUST00000065330 Cttnbp2B9EJA2 1648 aa29.45■■■□□ 2.31
Clk3-201ENSMUST00000065330 Smarca4Q3TKT4 1613 aaKnown RBP29.33■■■□□ 2.29
Clk3-201ENSMUST00000065330 Cc2d2aQ8CFW7 1633 aa29.23■■■□□ 2.27
Clk3-201ENSMUST00000065330 Supt5hO55201 1082 aaKnown RBP29.2■■■□□ 2.26
Clk3-201ENSMUST00000065330 Mier1Q5UAK0 511 aa29.15■■■□□ 2.26
Clk3-201ENSMUST00000065330 Fmn1Q05860 1466 aa29.05■■■□□ 2.24
Clk3-201ENSMUST00000065330 NefmP08553 848 aa29.02■■■□□ 2.24
Clk3-201ENSMUST00000065330 Rapgef2Q8CHG7 1496 aa29.01■■■□□ 2.23
Clk3-201ENSMUST00000065330 Zeb1Q64318 1117 aa28.96■■■□□ 2.23
Clk3-201ENSMUST00000065330 Top2aQ01320 1528 aaKnown RBP28.95■■■□□ 2.22
Clk3-201ENSMUST00000065330 Iqgap2Q3UQ44 1575 aa28.94■■■□□ 2.22
Clk3-201ENSMUST00000065330 UbtfP25976 765 aaKnown RBP28.8■■■□□ 2.2
Clk3-201ENSMUST00000065330 Cep162Q6ZQ06 1403 aa28.8■■■□□ 2.2
Clk3-201ENSMUST00000065330 Myt1lP97500 1187 aa28.79■■■□□ 2.2
Clk3-201ENSMUST00000065330 Atad2bE9Q166 1460 aaKnown RBP28.75■■■□□ 2.19
Clk3-201ENSMUST00000065330 Npm2Q80W85 207 aa28.68■■■□□ 2.18
Clk3-201ENSMUST00000065330 Pds5bQ4VA53 1446 aaKnown RBP28.58■■■□□ 2.17
Clk3-201ENSMUST00000065330 Sall2Q9QX96 1004 aa28.5■■■□□ 2.15
Clk3-201ENSMUST00000065330 TnnQ80Z71 1560 aa28.47■■■□□ 2.15
Clk3-201ENSMUST00000065330 Eif4g1Q6NZJ6 1600 aaKnown RBP28.44■■■□□ 2.14
Clk3-201ENSMUST00000065330 Clip1Q922J3 1391 aa28.43■■■□□ 2.14
Clk3-201ENSMUST00000065330 Frmpd1A2AKB4 1549 aa28.39■■■□□ 2.14
Clk3-201ENSMUST00000065330 Neurod1Q60867 357 aa28.38■■■□□ 2.13
Clk3-201ENSMUST00000065330 Plekhg3Q4VAC9 1341 aa28.36■■■□□ 2.13
Clk3-201ENSMUST00000065330 Wdr62Q3U3T8 1523 aa28.33■■■□□ 2.13
Clk3-201ENSMUST00000065330 Las1lA2BE28 776 aaKnown RBP28.29■■■□□ 2.12
Clk3-201ENSMUST00000065330 PtprkP35822 1457 aa28.29■■■□□ 2.12
Clk3-201ENSMUST00000065330 Arhgap35Q91YM2 1499 aa28.28■■■□□ 2.12
Clk3-201ENSMUST00000065330 Il27Q8K3I6 234 aa28.26■■■□□ 2.11
Clk3-201ENSMUST00000065330 Lamc3Q9R0B6 1581 aa28.22■■■□□ 2.11
Clk3-201ENSMUST00000065330 Aebp2Q9Z248 504 aaKnown RBP28.21■■■□□ 2.11
Clk3-201ENSMUST00000065330 Kif15Q6P9L6 1387 aa28.2■■■□□ 2.11
Clk3-201ENSMUST00000065330 NrkQ9R0G8 1455 aa28.19■■■□□ 2.1
Clk3-201ENSMUST00000065330 Wdr66E9Q743 1299 aa28.18■■■□□ 2.1
Clk3-201ENSMUST00000065330 Ercc6F8VPZ5 1481 aa28.09■■■□□ 2.09
Clk3-201ENSMUST00000065330 Ncapd3Q6ZQK0 1506 aa28.09■■■□□ 2.09
Clk3-201ENSMUST00000065330 Eea1Q8BL66 1411 aa28.08■■■□□ 2.09
Clk3-201ENSMUST00000065330 Arap1Q4LDD4 1452 aa28.06■■■□□ 2.08
Clk3-201ENSMUST00000065330 Shroom4Q1W617 1475 aa28.05■■■□□ 2.08
Clk3-201ENSMUST00000065330 Ap3b1Q9Z1T1 1105 aa28.04■■■□□ 2.08
Clk3-201ENSMUST00000065330 Camsap1A2AHC3 1581 aa28.04■■■□□ 2.08
Clk3-201ENSMUST00000065330 TonslQ6NZL6 1363 aa28.04■■■□□ 2.08
Clk3-201ENSMUST00000065330 Unc13aQ4KUS2 1712 aa28■■■□□ 2.07
Clk3-201ENSMUST00000065330 Setd5Q5XJV7 1441 aa27.97■■■□□ 2.07
Clk3-201ENSMUST00000065330 ClspnQ80YR7 1315 aa27.96■■■□□ 2.07
Clk3-201ENSMUST00000065330 Map3k1P53349 1493 aa27.93■■■□□ 2.06
Clk3-201ENSMUST00000065330 Arhgef5E9Q7D5 1581 aa27.92■■■□□ 2.06
Clk3-201ENSMUST00000065330 Ppargc1bQ8VHJ7 1014 aa27.91■■■□□ 2.06
Clk3-201ENSMUST00000065330 Ccdc18Q640L5 1455 aa27.9■■■□□ 2.06
Clk3-201ENSMUST00000065330 Grin2bQ01097 1482 aa27.89■■■□□ 2.06
Clk3-201ENSMUST00000065330 Mroh2bQ7M6Y6 1581 aa27.81■■■□□ 2.04
Clk3-201ENSMUST00000065330 Baz1bQ9Z277 1479 aa27.77■■■□□ 2.04
Clk3-201ENSMUST00000065330 Anks4bQ8K3X6 423 aa27.73■■■□□ 2.03
Clk3-201ENSMUST00000065330 Tiam1Q60610 1591 aa27.72■■■□□ 2.03
Clk3-201ENSMUST00000065330 Phldb1Q6PDH0 1371 aaKnown RBP27.7■■■□□ 2.02
Clk3-201ENSMUST00000065330 Kdm5bQ80Y84 1544 aa27.69■■■□□ 2.02
Clk3-201ENSMUST00000065330 Eid3Q3V124 375 aa27.69■■■□□ 2.02
Clk3-201ENSMUST00000065330 Nop58Q6DFW4 536 aaKnown RBP27.68■■■□□ 2.02
Clk3-201ENSMUST00000065330 Naip1Q9QWK5 1403 aa27.68■■■□□ 2.02
Clk3-201ENSMUST00000065330 Cux2P70298 1426 aa27.68■■■□□ 2.02
Clk3-201ENSMUST00000065330 Ankrd26Q811D2 1581 aa27.67■■■□□ 2.02
Clk3-201ENSMUST00000065330 BlmO88700 1416 aa27.67■■■□□ 2.02
Retrieved 100 of 22,080 RNA–protein pairs in 69.7 ms