RNA–Protein interactions for RNA: ENSMUST00000058960.13

Ccdc63-201, Transcript of Coiled-coil domain-containing protein 63, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc63, Length 2,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc63-201ENSMUST00000058960 Gm35339A0A140LHH9 1649 aa19.9■□□□□ 0.78
Ccdc63-201ENSMUST00000058960 NischQ80TM9 1593 aa19.78■□□□□ 0.76
Ccdc63-201ENSMUST00000058960 Abcc9P70170 1546 aa19.2■□□□□ 0.66
Ccdc63-201ENSMUST00000058960 Abcc8B2RUS7 1588 aa19.03■□□□□ 0.64
Ccdc63-201ENSMUST00000058960 Rpgrip1Q9EPQ2 1331 aa18.62■□□□□ 0.57
Ccdc63-201ENSMUST00000058960 Rtl1Q7M732 1744 aa18.5■□□□□ 0.55
Ccdc63-201ENSMUST00000058960 Rhox8Q6VSS7 320 aa18.48■□□□□ 0.55
Ccdc63-201ENSMUST00000058960 ScribQ80U72 1612 aa18.17■□□□□ 0.5
Ccdc63-201ENSMUST00000058960 Ccdc180J3QNE4 1664 aa18.16■□□□□ 0.5
Ccdc63-201ENSMUST00000058960 Pcgf6Q99NA9 353 aa17.88■□□□□ 0.45
Ccdc63-201ENSMUST00000058960 Myt1Q8CFC2 1127 aa17.86■□□□□ 0.45
Ccdc63-201ENSMUST00000058960 Zcchc6Q5BLK4 1491 aaKnown RBP17.65■□□□□ 0.42
Ccdc63-201ENSMUST00000058960 Kdm5dQ62240 1548 aa17.65■□□□□ 0.42
Ccdc63-201ENSMUST00000058960 NacadQ5SWP3 1504 aa17.62■□□□□ 0.41
Ccdc63-201ENSMUST00000058960 DiexfQ8BTT6 772 aaKnown RBP17.59■□□□□ 0.41
Ccdc63-201ENSMUST00000058960 Dcaf1Q80TR8 1506 aa17.59■□□□□ 0.41
Ccdc63-201ENSMUST00000058960 Las1lA2BE28 776 aaKnown RBP17.47■□□□□ 0.39
Ccdc63-201ENSMUST00000058960 CenpbP27790 599 aa17.44■□□□□ 0.38
Ccdc63-201ENSMUST00000058960 Acin1Q9JIX8 1338 aaKnown RBP17.37■□□□□ 0.37
Ccdc63-201ENSMUST00000058960 Rb1cc1Q9ESK9 1588 aa17.35■□□□□ 0.37
Ccdc63-201ENSMUST00000058960 Sycp2Q9CUU3 1500 aa17.27■□□□□ 0.35
Ccdc63-201ENSMUST00000058960 HrcG5E8J6 738 aa17.19■□□□□ 0.34
Ccdc63-201ENSMUST00000058960 Baz1aO88379 1555 aa17.14■□□□□ 0.34
Ccdc63-201ENSMUST00000058960 Ccdc136Q3TVA9 1136 aa17.08■□□□□ 0.32
Ccdc63-201ENSMUST00000058960 Bcl11aQ9QYE3 773 aa17.08■□□□□ 0.32
Ccdc63-201ENSMUST00000058960 BicraF8VPZ9 1578 aa16.99■□□□□ 0.31
Ccdc63-201ENSMUST00000058960 Neurod1Q60867 357 aa16.96■□□□□ 0.31
Ccdc63-201ENSMUST00000058960 Crybg2B7ZCC2 1516 aa16.91■□□□□ 0.3
Ccdc63-201ENSMUST00000058960 Amer1Q7TS75 1132 aa16.9■□□□□ 0.3
Ccdc63-201ENSMUST00000058960 1700123L14RikQ3V2K7 440 aa16.9■□□□□ 0.3
Ccdc63-201ENSMUST00000058960 Ehmt2Q9Z148 1263 aaKnown RBP16.87■□□□□ 0.29
Ccdc63-201ENSMUST00000058960 Trim41Q5NCC3 630 aa16.81■□□□□ 0.28
Ccdc63-201ENSMUST00000058960 Smarca2Q6DIC0 1577 aa16.76■□□□□ 0.27
Ccdc63-201ENSMUST00000058960 Cep164Q5DU05 1446 aa16.65■□□□□ 0.26
Ccdc63-201ENSMUST00000058960 Supt5hO55201 1082 aaKnown RBP16.58■□□□□ 0.24
Ccdc63-201ENSMUST00000058960 Aplp2Q06335 707 aa16.58■□□□□ 0.24
Ccdc63-201ENSMUST00000058960 PrkcshO08795 521 aa16.55■□□□□ 0.24
Ccdc63-201ENSMUST00000058960 Anks4bQ8K3X6 423 aa16.53■□□□□ 0.24
Ccdc63-201ENSMUST00000058960 Pds5bQ4VA53 1446 aaKnown RBP16.43■□□□□ 0.22
Ccdc63-201ENSMUST00000058960 Cecr2E9Q2Z1 1453 aa16.41■□□□□ 0.22
Ccdc63-201ENSMUST00000058960 Csrnp3P59055 597 aa16.4■□□□□ 0.22
Ccdc63-201ENSMUST00000058960 Brd4Q9ESU6 1400 aaKnown RBP16.39■□□□□ 0.21
Ccdc63-201ENSMUST00000058960 Cngb1E1AZ71 1325 aa16.38■□□□□ 0.21
Ccdc63-201ENSMUST00000058960 Smarca4Q3TKT4 1613 aaKnown RBP16.34■□□□□ 0.21
Ccdc63-201ENSMUST00000058960 Rsf1E9PWW9 1441 aaKnown RBP16.34■□□□□ 0.21
Ccdc63-201ENSMUST00000058960 Atad2bE9Q166 1460 aaKnown RBP16.34■□□□□ 0.21
Ccdc63-201ENSMUST00000058960 Chic1Q8CBW7 227 aa16.28■□□□□ 0.2
Ccdc63-201ENSMUST00000058960 Golga3P55937 1487 aa16.27■□□□□ 0.19
Ccdc63-201ENSMUST00000058960 Gab3Q8BSM5 595 aa16.24■□□□□ 0.19
Ccdc63-201ENSMUST00000058960 Synj1Q8CHC4 1574 aa16.22■□□□□ 0.19
Ccdc63-201ENSMUST00000058960 Iqgap2Q3UQ44 1575 aa16.21■□□□□ 0.19
Ccdc63-201ENSMUST00000058960 Ccdc88bQ4QRL3 1481 aa16.2■□□□□ 0.18
Ccdc63-201ENSMUST00000058960 Thoc2B1AZI6 1594 aaKnown RBP16.19■□□□□ 0.18
Ccdc63-201ENSMUST00000058960 CatipB9EKE5 520 aa16.16■□□□□ 0.18
Ccdc63-201ENSMUST00000058960 Ercc6F8VPZ5 1481 aa16.1■□□□□ 0.17
Ccdc63-201ENSMUST00000058960 CftrP26361 1476 aa16.07■□□□□ 0.16
Ccdc63-201ENSMUST00000058960 Dnajc5bQ9CQ94 199 aa16.07■□□□□ 0.16
Ccdc63-201ENSMUST00000058960 Top2bQ64511 1612 aa16.07■□□□□ 0.16
Ccdc63-201ENSMUST00000058960 Cttnbp2B9EJA2 1648 aa16.06■□□□□ 0.16
Ccdc63-201ENSMUST00000058960 Esf1Q3V1V3 845 aaKnown RBP16.05■□□□□ 0.16
Ccdc63-201ENSMUST00000058960 NefmP08553 848 aa16.03■□□□□ 0.16
Ccdc63-201ENSMUST00000058960 Wdr62Q3U3T8 1523 aa16.02■□□□□ 0.16
Ccdc63-201ENSMUST00000058960 Frmpd1A2AKB4 1549 aa16■□□□□ 0.15
Ccdc63-201ENSMUST00000058960 Mier1Q5UAK0 511 aa15.97■□□□□ 0.15
Ccdc63-201ENSMUST00000058960 Cc2d2aQ8CFW7 1633 aa15.96■□□□□ 0.15
Ccdc63-201ENSMUST00000058960 Pknox2Q8BG99 474 aa15.93■□□□□ 0.14
Ccdc63-201ENSMUST00000058960 Ifnlr1Q8CGK5 535 aa15.93■□□□□ 0.14
Ccdc63-201ENSMUST00000058960 Fgd1P52734 960 aa15.92■□□□□ 0.14
Ccdc63-201ENSMUST00000058960 Zeb1Q64318 1117 aa15.92■□□□□ 0.14
Ccdc63-201ENSMUST00000058960 NrdcQ8BHG1 1161 aa15.91■□□□□ 0.14
Ccdc63-201ENSMUST00000058960 Fam135aQ6NS59 1506 aa15.88■□□□□ 0.13
Ccdc63-201ENSMUST00000058960 Unc13aQ4KUS2 1712 aa15.84■□□□□ 0.13
Ccdc63-201ENSMUST00000058960 Rapgef2Q8CHG7 1496 aa15.83■□□□□ 0.12
Ccdc63-201ENSMUST00000058960 Phldb1Q6PDH0 1371 aaKnown RBP15.82■□□□□ 0.12
Ccdc63-201ENSMUST00000058960 Fmn1Q05860 1466 aa15.82■□□□□ 0.12
Ccdc63-201ENSMUST00000058960 Rtl5Q5DTT4 599 aa15.82■□□□□ 0.12
Ccdc63-201ENSMUST00000058960 Fam71e1A1L3C1 212 aa15.8■□□□□ 0.12
Ccdc63-201ENSMUST00000058960 Top2aQ01320 1528 aaKnown RBP15.77■□□□□ 0.11
Ccdc63-201ENSMUST00000058960 Hdac5Q9Z2V6 1113 aa15.76■□□□□ 0.11
Ccdc63-201ENSMUST00000058960 UbtfP25976 765 aaKnown RBP15.71■□□□□ 0.11
Ccdc63-201ENSMUST00000058960 Sall2Q9QX96 1004 aa15.7■□□□□ 0.1
Ccdc63-201ENSMUST00000058960 Ubl4bQ9CQ84 188 aa15.68■□□□□ 0.1
Ccdc63-201ENSMUST00000058960 Cep162Q6ZQ06 1403 aa15.68■□□□□ 0.1
Ccdc63-201ENSMUST00000058960 Cdk11bP24788 784 aaKnown RBP15.68■□□□□ 0.1
Ccdc63-201ENSMUST00000058960 Baz1bQ9Z277 1479 aa15.66■□□□□ 0.1
Ccdc63-201ENSMUST00000058960 Myt1lP97500 1187 aa15.63■□□□□ 0.09
Ccdc63-201ENSMUST00000058960 Npm2Q80W85 207 aa15.58■□□□□ 0.08
Ccdc63-201ENSMUST00000058960 Gm38655A0A286YDK6 273 aa15.56■□□□□ 0.08
Ccdc63-201ENSMUST00000058960 Plppr3Q7TPB0 716 aa15.55■□□□□ 0.08
Ccdc63-201ENSMUST00000058960 BccipQ9CWI3 316 aa15.55■□□□□ 0.08
Ccdc63-201ENSMUST00000058960 Lamc3Q9R0B6 1581 aa15.54■□□□□ 0.08
Ccdc63-201ENSMUST00000058960 Wdr66E9Q743 1299 aa15.54■□□□□ 0.08
Ccdc63-201ENSMUST00000058960 Kif15Q6P9L6 1387 aa15.53■□□□□ 0.08
Ccdc63-201ENSMUST00000058960 Eif4g1Q6NZJ6 1600 aaKnown RBP15.53■□□□□ 0.08
Ccdc63-201ENSMUST00000058960 Gtf3c5Q8R2T8 520 aa15.52■□□□□ 0.07
Ccdc63-201ENSMUST00000058960 Mrc2Q64449 1479 aa15.51■□□□□ 0.07
Ccdc63-201ENSMUST00000058960 Nop58Q6DFW4 536 aaKnown RBP15.5■□□□□ 0.07
Ccdc63-201ENSMUST00000058960 Clip1Q922J3 1391 aa15.5■□□□□ 0.07
Ccdc63-201ENSMUST00000058960 TnnQ80Z71 1560 aa15.49■□□□□ 0.07
Ccdc63-201ENSMUST00000058960 Pelp1Q9DBD5 1123 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms