RNA–Protein interactions for RNA: ENSMUST00000058860.13

Usf2-201, Transcript of Upstream stimulatory factor 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf2, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2-201ENSMUST00000058860 NischQ80TM9 1593 aa36.49■■■■□ 3.43
Usf2-201ENSMUST00000058860 Gm35339A0A140LHH9 1649 aa35.82■■■■□ 3.32
Usf2-201ENSMUST00000058860 Abcc9P70170 1546 aa35.48■■■■□ 3.27
Usf2-201ENSMUST00000058860 Abcc8B2RUS7 1588 aa34.62■■■■□ 3.13
Usf2-201ENSMUST00000058860 Rhox8Q6VSS7 320 aa33.93■■■■□ 3.02
Usf2-201ENSMUST00000058860 Rtl1Q7M732 1744 aa33.7■■■□□ 2.99
Usf2-201ENSMUST00000058860 Ccdc180J3QNE4 1664 aa33.1■■■□□ 2.89
Usf2-201ENSMUST00000058860 Zcchc6Q5BLK4 1491 aaKnown RBP32.44■■■□□ 2.78
Usf2-201ENSMUST00000058860 Dcaf1Q80TR8 1506 aa32.37■■■□□ 2.77
Usf2-201ENSMUST00000058860 ScribQ80U72 1612 aa32.16■■■□□ 2.74
Usf2-201ENSMUST00000058860 Rb1cc1Q9ESK9 1588 aa32■■■□□ 2.71
Usf2-201ENSMUST00000058860 Baz1aO88379 1555 aa31.64■■■□□ 2.66
Usf2-201ENSMUST00000058860 Kdm5dQ62240 1548 aa31.63■■■□□ 2.65
Usf2-201ENSMUST00000058860 Rpgrip1Q9EPQ2 1331 aa31.55■■■□□ 2.64
Usf2-201ENSMUST00000058860 HrcG5E8J6 738 aa31.5■■■□□ 2.63
Usf2-201ENSMUST00000058860 Ccdc136Q3TVA9 1136 aa31.42■■■□□ 2.62
Usf2-201ENSMUST00000058860 NacadQ5SWP3 1504 aa31.36■■■□□ 2.61
Usf2-201ENSMUST00000058860 Acin1Q9JIX8 1338 aaKnown RBP31.02■■■□□ 2.56
Usf2-201ENSMUST00000058860 Crybg2B7ZCC2 1516 aa31.02■■■□□ 2.56
Usf2-201ENSMUST00000058860 Smarca2Q6DIC0 1577 aa30.95■■■□□ 2.54
Usf2-201ENSMUST00000058860 Trim41Q5NCC3 630 aa30.82■■■□□ 2.52
Usf2-201ENSMUST00000058860 Ehmt2Q9Z148 1263 aaKnown RBP30.76■■■□□ 2.51
Usf2-201ENSMUST00000058860 Sycp2Q9CUU3 1500 aa30.67■■■□□ 2.5
Usf2-201ENSMUST00000058860 Cep164Q5DU05 1446 aa30.55■■■□□ 2.48
Usf2-201ENSMUST00000058860 Brd4Q9ESU6 1400 aaKnown RBP30.22■■■□□ 2.43
Usf2-201ENSMUST00000058860 Cecr2E9Q2Z1 1453 aa30.11■■■□□ 2.41
Usf2-201ENSMUST00000058860 Rsf1E9PWW9 1441 aaKnown RBP30.08■■■□□ 2.41
Usf2-201ENSMUST00000058860 Cngb1E1AZ71 1325 aa30.07■■■□□ 2.4
Usf2-201ENSMUST00000058860 Chic1Q8CBW7 227 aa29.98■■■□□ 2.39
Usf2-201ENSMUST00000058860 Golga3P55937 1487 aa29.96■■■□□ 2.39
Usf2-201ENSMUST00000058860 BicraF8VPZ9 1578 aa29.94■■■□□ 2.38
Usf2-201ENSMUST00000058860 Synj1Q8CHC4 1574 aa29.93■■■□□ 2.38
Usf2-201ENSMUST00000058860 Ccdc88bQ4QRL3 1481 aa29.85■■■□□ 2.37
Usf2-201ENSMUST00000058860 Gab3Q8BSM5 595 aa29.76■■■□□ 2.36
Usf2-201ENSMUST00000058860 Pcgf6Q99NA9 353 aa29.74■■■□□ 2.35
Usf2-201ENSMUST00000058860 CftrP26361 1476 aa29.73■■■□□ 2.35
Usf2-201ENSMUST00000058860 Top2bQ64511 1612 aa29.59■■■□□ 2.33
Usf2-201ENSMUST00000058860 Cttnbp2B9EJA2 1648 aa29.57■■■□□ 2.32
Usf2-201ENSMUST00000058860 Esf1Q3V1V3 845 aaKnown RBP29.54■■■□□ 2.32
Usf2-201ENSMUST00000058860 Smarca4Q3TKT4 1613 aaKnown RBP29.39■■■□□ 2.3
Usf2-201ENSMUST00000058860 Cc2d2aQ8CFW7 1633 aa29.28■■■□□ 2.28
Usf2-201ENSMUST00000058860 Supt5hO55201 1082 aaKnown RBP29.26■■■□□ 2.27
Usf2-201ENSMUST00000058860 NefmP08553 848 aa29.19■■■□□ 2.26
Usf2-201ENSMUST00000058860 Mier1Q5UAK0 511 aa29.17■■■□□ 2.26
Usf2-201ENSMUST00000058860 Fmn1Q05860 1466 aa29.15■■■□□ 2.26
Usf2-201ENSMUST00000058860 Rapgef2Q8CHG7 1496 aa29.11■■■□□ 2.25
Usf2-201ENSMUST00000058860 Top2aQ01320 1528 aaKnown RBP29.05■■■□□ 2.24
Usf2-201ENSMUST00000058860 Iqgap2Q3UQ44 1575 aa28.96■■■□□ 2.23
Usf2-201ENSMUST00000058860 Zeb1Q64318 1117 aa28.94■■■□□ 2.22
Usf2-201ENSMUST00000058860 Cep162Q6ZQ06 1403 aa28.86■■■□□ 2.21
Usf2-201ENSMUST00000058860 Atad2bE9Q166 1460 aaKnown RBP28.76■■■□□ 2.2
Usf2-201ENSMUST00000058860 UbtfP25976 765 aaKnown RBP28.73■■■□□ 2.19
Usf2-201ENSMUST00000058860 Myt1lP97500 1187 aa28.66■■■□□ 2.18
Usf2-201ENSMUST00000058860 Pds5bQ4VA53 1446 aaKnown RBP28.63■■■□□ 2.17
Usf2-201ENSMUST00000058860 TnnQ80Z71 1560 aa28.6■■■□□ 2.17
Usf2-201ENSMUST00000058860 Eif4g1Q6NZJ6 1600 aaKnown RBP28.6■■■□□ 2.17
Usf2-201ENSMUST00000058860 Npm2Q80W85 207 aa28.59■■■□□ 2.17
Usf2-201ENSMUST00000058860 Sall2Q9QX96 1004 aa28.55■■■□□ 2.16
Usf2-201ENSMUST00000058860 Neurod1Q60867 357 aa28.53■■■□□ 2.16
Usf2-201ENSMUST00000058860 Clip1Q922J3 1391 aa28.45■■■□□ 2.14
Usf2-201ENSMUST00000058860 Las1lA2BE28 776 aaKnown RBP28.39■■■□□ 2.14
Usf2-201ENSMUST00000058860 Frmpd1A2AKB4 1549 aa28.36■■■□□ 2.13
Usf2-201ENSMUST00000058860 Wdr62Q3U3T8 1523 aa28.35■■■□□ 2.13
Usf2-201ENSMUST00000058860 Arhgap35Q91YM2 1499 aa28.32■■■□□ 2.12
Usf2-201ENSMUST00000058860 Lamc3Q9R0B6 1581 aa28.29■■■□□ 2.12
Usf2-201ENSMUST00000058860 NrkQ9R0G8 1455 aa28.28■■■□□ 2.12
Usf2-201ENSMUST00000058860 Plekhg3Q4VAC9 1341 aa28.27■■■□□ 2.12
Usf2-201ENSMUST00000058860 PtprkP35822 1457 aa28.24■■■□□ 2.11
Usf2-201ENSMUST00000058860 Ncapd3Q6ZQK0 1506 aa28.21■■■□□ 2.11
Usf2-201ENSMUST00000058860 Aebp2Q9Z248 504 aaKnown RBP28.21■■■□□ 2.11
Usf2-201ENSMUST00000058860 Wdr66E9Q743 1299 aa28.2■■■□□ 2.11
Usf2-201ENSMUST00000058860 Kif15Q6P9L6 1387 aa28.14■■■□□ 2.1
Usf2-201ENSMUST00000058860 Eea1Q8BL66 1411 aa28.14■■■□□ 2.09
Usf2-201ENSMUST00000058860 Shroom4Q1W617 1475 aa28.12■■■□□ 2.09
Usf2-201ENSMUST00000058860 TonslQ6NZL6 1363 aa28.11■■■□□ 2.09
Usf2-201ENSMUST00000058860 Arap1Q4LDD4 1452 aa28.11■■■□□ 2.09
Usf2-201ENSMUST00000058860 ClspnQ80YR7 1315 aa28.1■■■□□ 2.09
Usf2-201ENSMUST00000058860 Ercc6F8VPZ5 1481 aa28.1■■■□□ 2.09
Usf2-201ENSMUST00000058860 Camsap1A2AHC3 1581 aa28.09■■■□□ 2.09
Usf2-201ENSMUST00000058860 Map3k1P53349 1493 aa28.07■■■□□ 2.08
Usf2-201ENSMUST00000058860 Il27Q8K3I6 234 aa28.06■■■□□ 2.08
Usf2-201ENSMUST00000058860 Unc13aQ4KUS2 1712 aa28.03■■■□□ 2.08
Usf2-201ENSMUST00000058860 Arhgef5E9Q7D5 1581 aa28.01■■■□□ 2.08
Usf2-201ENSMUST00000058860 Ccdc18Q640L5 1455 aa27.99■■■□□ 2.07
Usf2-201ENSMUST00000058860 Setd5Q5XJV7 1441 aa27.98■■■□□ 2.07
Usf2-201ENSMUST00000058860 Anks4bQ8K3X6 423 aa27.93■■■□□ 2.06
Usf2-201ENSMUST00000058860 Grin2bQ01097 1482 aa27.93■■■□□ 2.06
Usf2-201ENSMUST00000058860 Ap3b1Q9Z1T1 1105 aa27.89■■■□□ 2.06
Usf2-201ENSMUST00000058860 Thoc2B1AZI6 1594 aaKnown RBP27.86■■■□□ 2.05
Usf2-201ENSMUST00000058860 Mroh2bQ7M6Y6 1581 aa27.85■■■□□ 2.05
Usf2-201ENSMUST00000058860 Tiam1Q60610 1591 aa27.84■■■□□ 2.05
Usf2-201ENSMUST00000058860 Kdm5bQ80Y84 1544 aa27.83■■■□□ 2.04
Usf2-201ENSMUST00000058860 Erich3F6QRE9 1637 aa27.79■■■□□ 2.04
Usf2-201ENSMUST00000058860 Cdk11bP24788 784 aaKnown RBP27.79■■■□□ 2.04
Usf2-201ENSMUST00000058860 Nop58Q6DFW4 536 aaKnown RBP27.78■■■□□ 2.04
Usf2-201ENSMUST00000058860 Baz1bQ9Z277 1479 aa27.77■■■□□ 2.04
Usf2-201ENSMUST00000058860 AqrQ8CFQ3 1481 aaKnown RBP27.76■■■□□ 2.03
Usf2-201ENSMUST00000058860 Ankrd26Q811D2 1581 aa27.76■■■□□ 2.03
Usf2-201ENSMUST00000058860 Ppargc1bQ8VHJ7 1014 aa27.75■■■□□ 2.03
Usf2-201ENSMUST00000058860 Naip1Q9QWK5 1403 aa27.72■■■□□ 2.03
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms