RNA–Protein interactions for RNA: ENSMUST00000056712.3

Pcdhb4-201, Transcript of Protocadherin beta 4, mousemouse

APPRIS P1 BASIC

Gene Pcdhb4, Length 3,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4-201ENSMUST00000056712 NischQ80TM9 1593 aa18.3■□□□□ 0.52
Pcdhb4-201ENSMUST00000056712 Rhox8Q6VSS7 320 aa17.96■□□□□ 0.47
Pcdhb4-201ENSMUST00000056712 Abcc9P70170 1546 aa17.43■□□□□ 0.38
Pcdhb4-201ENSMUST00000056712 Gm35339A0A140LHH9 1649 aa17.3■□□□□ 0.36
Pcdhb4-201ENSMUST00000056712 Abcc8B2RUS7 1588 aa17.3■□□□□ 0.36
Pcdhb4-201ENSMUST00000056712 Ccdc136Q3TVA9 1136 aa16.64■□□□□ 0.25
Pcdhb4-201ENSMUST00000056712 ScribQ80U72 1612 aa16.27■□□□□ 0.2
Pcdhb4-201ENSMUST00000056712 Zcchc6Q5BLK4 1491 aaKnown RBP16.17■□□□□ 0.18
Pcdhb4-201ENSMUST00000056712 Kdm5dQ62240 1548 aa16.11■□□□□ 0.17
Pcdhb4-201ENSMUST00000056712 Ehmt2Q9Z148 1263 aaKnown RBP16.09■□□□□ 0.17
Pcdhb4-201ENSMUST00000056712 Rb1cc1Q9ESK9 1588 aa16.01■□□□□ 0.15
Pcdhb4-201ENSMUST00000056712 Esf1Q3V1V3 845 aaKnown RBP16.01■□□□□ 0.15
Pcdhb4-201ENSMUST00000056712 NacadQ5SWP3 1504 aa16.01■□□□□ 0.15
Pcdhb4-201ENSMUST00000056712 Cngb1E1AZ71 1325 aa15.98■□□□□ 0.15
Pcdhb4-201ENSMUST00000056712 Trim41Q5NCC3 630 aa15.8■□□□□ 0.12
Pcdhb4-201ENSMUST00000056712 Gab3Q8BSM5 595 aa15.69■□□□□ 0.1
Pcdhb4-201ENSMUST00000056712 Baz1aO88379 1555 aa15.64■□□□□ 0.09
Pcdhb4-201ENSMUST00000056712 Sycp2Q9CUU3 1500 aa15.62■□□□□ 0.09
Pcdhb4-201ENSMUST00000056712 Dcaf1Q80TR8 1506 aa15.61■□□□□ 0.09
Pcdhb4-201ENSMUST00000056712 Ccdc180J3QNE4 1664 aa15.55■□□□□ 0.08
Pcdhb4-201ENSMUST00000056712 Il27Q8K3I6 234 aa15.53■□□□□ 0.08
Pcdhb4-201ENSMUST00000056712 Rtl1Q7M732 1744 aa15.48■□□□□ 0.07
Pcdhb4-201ENSMUST00000056712 Rpgrip1Q9EPQ2 1331 aa15.47■□□□□ 0.07
Pcdhb4-201ENSMUST00000056712 Cecr2E9Q2Z1 1453 aa15.39■□□□□ 0.05
Pcdhb4-201ENSMUST00000056712 HrcG5E8J6 738 aa15.32■□□□□ 0.04
Pcdhb4-201ENSMUST00000056712 Myt1lP97500 1187 aa15.29■□□□□ 0.04
Pcdhb4-201ENSMUST00000056712 BicraF8VPZ9 1578 aa15.26■□□□□ 0.03
Pcdhb4-201ENSMUST00000056712 Chic1Q8CBW7 227 aa15.25■□□□□ 0.03
Pcdhb4-201ENSMUST00000056712 Zeb1Q64318 1117 aa15.25■□□□□ 0.03
Pcdhb4-201ENSMUST00000056712 Npm2Q80W85 207 aa15.25■□□□□ 0.03
Pcdhb4-201ENSMUST00000056712 Brd4Q9ESU6 1400 aaKnown RBP15.21■□□□□ 0.03
Pcdhb4-201ENSMUST00000056712 Acin1Q9JIX8 1338 aaKnown RBP15.19■□□□□ 0.02
Pcdhb4-201ENSMUST00000056712 Ubl4bQ9CQ84 188 aa15.14■□□□□ 0.01
Pcdhb4-201ENSMUST00000056712 Smarca2Q6DIC0 1577 aa15.12■□□□□ 0.01
Pcdhb4-201ENSMUST00000056712 Dnajc5bQ9CQ94 199 aa15.09■□□□□ 0.01
Pcdhb4-201ENSMUST00000056712 Crybg2B7ZCC2 1516 aa15.07■□□□□ 0
Pcdhb4-201ENSMUST00000056712 Pds5bQ4VA53 1446 aaKnown RBP15.01□□□□□ -0.01
Pcdhb4-201ENSMUST00000056712 Npm1Q61937 292 aaKnown RBP14.98□□□□□ -0.01
Pcdhb4-201ENSMUST00000056712 Synj1Q8CHC4 1574 aa14.98□□□□□ -0.01
Pcdhb4-201ENSMUST00000056712 CftrP26361 1476 aa14.96□□□□□ -0.01
Pcdhb4-201ENSMUST00000056712 Ercc6F8VPZ5 1481 aa14.91□□□□□ -0.02
Pcdhb4-201ENSMUST00000056712 Atad2bE9Q166 1460 aaKnown RBP14.9□□□□□ -0.02
Pcdhb4-201ENSMUST00000056712 Ap3b1Q9Z1T1 1105 aa14.9□□□□□ -0.02
Pcdhb4-201ENSMUST00000056712 UbtfP25976 765 aaKnown RBP14.9□□□□□ -0.02
Pcdhb4-201ENSMUST00000056712 Smarca4Q3TKT4 1613 aaKnown RBP14.89□□□□□ -0.03
Pcdhb4-201ENSMUST00000056712 Kif15Q6P9L6 1387 aa14.89□□□□□ -0.03
Pcdhb4-201ENSMUST00000056712 Golga3P55937 1487 aa14.86□□□□□ -0.03
Pcdhb4-201ENSMUST00000056712 Rsf1E9PWW9 1441 aaKnown RBP14.85□□□□□ -0.03
Pcdhb4-201ENSMUST00000056712 Ccdc88bQ4QRL3 1481 aa14.84□□□□□ -0.03
Pcdhb4-201ENSMUST00000056712 Iqgap2Q3UQ44 1575 aa14.83□□□□□ -0.04
Pcdhb4-201ENSMUST00000056712 Wdr66E9Q743 1299 aa14.8□□□□□ -0.04
Pcdhb4-201ENSMUST00000056712 Pcgf6Q99NA9 353 aa14.69□□□□□ -0.06
Pcdhb4-201ENSMUST00000056712 Las1lA2BE28 776 aaKnown RBP14.67□□□□□ -0.06
Pcdhb4-201ENSMUST00000056712 Cep164Q5DU05 1446 aa14.66□□□□□ -0.06
Pcdhb4-201ENSMUST00000056712 Frmpd1A2AKB4 1549 aa14.65□□□□□ -0.06
Pcdhb4-201ENSMUST00000056712 Cttnbp2B9EJA2 1648 aa14.64□□□□□ -0.07
Pcdhb4-201ENSMUST00000056712 Phldb1Q6PDH0 1371 aaKnown RBP14.63□□□□□ -0.07
Pcdhb4-201ENSMUST00000056712 Cux2P70298 1426 aa14.61□□□□□ -0.07
Pcdhb4-201ENSMUST00000056712 Plekhg3Q4VAC9 1341 aa14.6□□□□□ -0.07
Pcdhb4-201ENSMUST00000056712 NefmP08553 848 aa14.59□□□□□ -0.07
Pcdhb4-201ENSMUST00000056712 Mier1Q5UAK0 511 aa14.59□□□□□ -0.07
Pcdhb4-201ENSMUST00000056712 Lmod2Q3UHZ5 550 aa14.58□□□□□ -0.07
Pcdhb4-201ENSMUST00000056712 Supt5hO55201 1082 aaKnown RBP14.58□□□□□ -0.08
Pcdhb4-201ENSMUST00000056712 Ifnlr1Q8CGK5 535 aa14.54□□□□□ -0.08
Pcdhb4-201ENSMUST00000056712 Ppargc1bQ8VHJ7 1014 aa14.54□□□□□ -0.08
Pcdhb4-201ENSMUST00000056712 Fkbp15Q6P9Q6 1216 aaKnown RBP14.53□□□□□ -0.08
Pcdhb4-201ENSMUST00000056712 Ube2uB1AUC4 352 aa14.51□□□□□ -0.09
Pcdhb4-201ENSMUST00000056712 Cc2d2aQ8CFW7 1633 aa14.5□□□□□ -0.09
Pcdhb4-201ENSMUST00000056712 Wdr62Q3U3T8 1523 aa14.48□□□□□ -0.09
Pcdhb4-201ENSMUST00000056712 Ccdc18Q640L5 1455 aa14.46□□□□□ -0.1
Pcdhb4-201ENSMUST00000056712 Fmn1Q05860 1466 aa14.44□□□□□ -0.1
Pcdhb4-201ENSMUST00000056712 Pelp1Q9DBD5 1123 aaKnown RBP14.4□□□□□ -0.1
Pcdhb4-201ENSMUST00000056712 Fam50aQ9WV03 339 aaKnown RBP14.34□□□□□ -0.11
Pcdhb4-201ENSMUST00000056712 Clip1Q922J3 1391 aa14.33□□□□□ -0.12
Pcdhb4-201ENSMUST00000056712 Dhx29Q6PGC1 1365 aaKnown RBP14.32□□□□□ -0.12
Pcdhb4-201ENSMUST00000056712 Rapgef2Q8CHG7 1496 aa14.32□□□□□ -0.12
Pcdhb4-201ENSMUST00000056712 LrpprcQ6PB66 1392 aaKnown RBP14.3□□□□□ -0.12
Pcdhb4-201ENSMUST00000056712 Arhgap27A2AB59 869 aa14.26□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 PtprkP35822 1457 aa14.25□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 Zbtb7cQ8VCZ7 619 aa14.25□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 Cep162Q6ZQ06 1403 aa14.23□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 Thoc2B1AZI6 1594 aaKnown RBP14.23□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 Top2bQ64511 1612 aa14.23□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 Setd5Q5XJV7 1441 aa14.22□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 Baz1bQ9Z277 1479 aa14.22□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 Mrc2Q64449 1479 aa14.21□□□□□ -0.13
Pcdhb4-201ENSMUST00000056712 Eid3Q3V124 375 aa14.2□□□□□ -0.14
Pcdhb4-201ENSMUST00000056712 Rad54l2Q99NG0 1466 aa14.19□□□□□ -0.14
Pcdhb4-201ENSMUST00000056712 Sall2Q9QX96 1004 aa14.18□□□□□ -0.14
Pcdhb4-201ENSMUST00000056712 TonslQ6NZL6 1363 aa14.17□□□□□ -0.14
Pcdhb4-201ENSMUST00000056712 Plppr3Q7TPB0 716 aa14.13□□□□□ -0.15
Pcdhb4-201ENSMUST00000056712 Urb2E9Q7L1 1524 aaKnown RBP14.12□□□□□ -0.15
Pcdhb4-201ENSMUST00000056712 Top2aQ01320 1528 aaKnown RBP14.12□□□□□ -0.15
Pcdhb4-201ENSMUST00000056712 Duox2A2AQ99 1517 aa14.11□□□□□ -0.15
Pcdhb4-201ENSMUST00000056712 BlmO88700 1416 aa14.11□□□□□ -0.15
Pcdhb4-201ENSMUST00000056712 Plb1Q3TTY0 1478 aa14.09□□□□□ -0.15
Pcdhb4-201ENSMUST00000056712 Chic2Q9D9G3 165 aa14.09□□□□□ -0.15
Pcdhb4-201ENSMUST00000056712 Lamc3Q9R0B6 1581 aa14.09□□□□□ -0.15
Pcdhb4-201ENSMUST00000056712 Camsap1A2AHC3 1581 aa14.08□□□□□ -0.16
Pcdhb4-201ENSMUST00000056712 Cdk11bP24788 784 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms