RNA–Protein interactions for RNA: ENSMUST00000052366.4

Pcdhb1-201, Transcript of Protocadherin beta 1, mousemouse

APPRIS P1 BASIC

Gene Pcdhb1, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1-201ENSMUST00000052366 NischQ80TM9 1593 aa24.19■■□□□ 1.46
Pcdhb1-201ENSMUST00000052366 Gm35339A0A140LHH9 1649 aa23.58■■□□□ 1.37
Pcdhb1-201ENSMUST00000052366 Abcc9P70170 1546 aa23.46■■□□□ 1.35
Pcdhb1-201ENSMUST00000052366 Abcc8B2RUS7 1588 aa22.89■■□□□ 1.26
Pcdhb1-201ENSMUST00000052366 Rhox8Q6VSS7 320 aa22.76■■□□□ 1.23
Pcdhb1-201ENSMUST00000052366 Rtl1Q7M732 1744 aa22.31■■□□□ 1.16
Pcdhb1-201ENSMUST00000052366 Ccdc180J3QNE4 1664 aa21.97■■□□□ 1.11
Pcdhb1-201ENSMUST00000052366 Zcchc6Q5BLK4 1491 aaKnown RBP21.5■■□□□ 1.03
Pcdhb1-201ENSMUST00000052366 Dcaf1Q80TR8 1506 aa21.29■■□□□ 1
Pcdhb1-201ENSMUST00000052366 ScribQ80U72 1612 aa21.29■■□□□ 1
Pcdhb1-201ENSMUST00000052366 Rb1cc1Q9ESK9 1588 aa21.23■□□□□ 0.99
Pcdhb1-201ENSMUST00000052366 Ccdc136Q3TVA9 1136 aa21.08■□□□□ 0.97
Pcdhb1-201ENSMUST00000052366 Rpgrip1Q9EPQ2 1331 aa21.03■□□□□ 0.96
Pcdhb1-201ENSMUST00000052366 Kdm5dQ62240 1548 aa20.95■□□□□ 0.94
Pcdhb1-201ENSMUST00000052366 Baz1aO88379 1555 aa20.94■□□□□ 0.94
Pcdhb1-201ENSMUST00000052366 HrcG5E8J6 738 aa20.92■□□□□ 0.94
Pcdhb1-201ENSMUST00000052366 Ehmt2Q9Z148 1263 aaKnown RBP20.79■□□□□ 0.92
Pcdhb1-201ENSMUST00000052366 Acin1Q9JIX8 1338 aaKnown RBP20.73■□□□□ 0.91
Pcdhb1-201ENSMUST00000052366 NacadQ5SWP3 1504 aa20.72■□□□□ 0.91
Pcdhb1-201ENSMUST00000052366 Trim41Q5NCC3 630 aa20.61■□□□□ 0.89
Pcdhb1-201ENSMUST00000052366 Smarca2Q6DIC0 1577 aa20.47■□□□□ 0.87
Pcdhb1-201ENSMUST00000052366 Crybg2B7ZCC2 1516 aa20.42■□□□□ 0.86
Pcdhb1-201ENSMUST00000052366 Cep164Q5DU05 1446 aa20.3■□□□□ 0.84
Pcdhb1-201ENSMUST00000052366 Sycp2Q9CUU3 1500 aa20.26■□□□□ 0.83
Pcdhb1-201ENSMUST00000052366 Cngb1E1AZ71 1325 aa20.16■□□□□ 0.82
Pcdhb1-201ENSMUST00000052366 Brd4Q9ESU6 1400 aaKnown RBP20.04■□□□□ 0.8
Pcdhb1-201ENSMUST00000052366 Chic1Q8CBW7 227 aa20.03■□□□□ 0.8
Pcdhb1-201ENSMUST00000052366 Rsf1E9PWW9 1441 aaKnown RBP20.02■□□□□ 0.8
Pcdhb1-201ENSMUST00000052366 Gab3Q8BSM5 595 aa20.01■□□□□ 0.79
Pcdhb1-201ENSMUST00000052366 Cecr2E9Q2Z1 1453 aa20■□□□□ 0.79
Pcdhb1-201ENSMUST00000052366 Pcgf6Q99NA9 353 aa19.96■□□□□ 0.79
Pcdhb1-201ENSMUST00000052366 Golga3P55937 1487 aa19.88■□□□□ 0.77
Pcdhb1-201ENSMUST00000052366 Ccdc88bQ4QRL3 1481 aa19.88■□□□□ 0.77
Pcdhb1-201ENSMUST00000052366 Synj1Q8CHC4 1574 aa19.87■□□□□ 0.77
Pcdhb1-201ENSMUST00000052366 BicraF8VPZ9 1578 aa19.81■□□□□ 0.76
Pcdhb1-201ENSMUST00000052366 Esf1Q3V1V3 845 aaKnown RBP19.79■□□□□ 0.76
Pcdhb1-201ENSMUST00000052366 CftrP26361 1476 aa19.7■□□□□ 0.74
Pcdhb1-201ENSMUST00000052366 Supt5hO55201 1082 aaKnown RBP19.66■□□□□ 0.74
Pcdhb1-201ENSMUST00000052366 Top2bQ64511 1612 aa19.58■□□□□ 0.73
Pcdhb1-201ENSMUST00000052366 Cttnbp2B9EJA2 1648 aa19.57■□□□□ 0.72
Pcdhb1-201ENSMUST00000052366 Mier1Q5UAK0 511 aa19.52■□□□□ 0.72
Pcdhb1-201ENSMUST00000052366 Zeb1Q64318 1117 aa19.51■□□□□ 0.71
Pcdhb1-201ENSMUST00000052366 Cc2d2aQ8CFW7 1633 aa19.48■□□□□ 0.71
Pcdhb1-201ENSMUST00000052366 NefmP08553 848 aa19.47■□□□□ 0.71
Pcdhb1-201ENSMUST00000052366 Smarca4Q3TKT4 1613 aaKnown RBP19.45■□□□□ 0.7
Pcdhb1-201ENSMUST00000052366 Fmn1Q05860 1466 aa19.31■□□□□ 0.68
Pcdhb1-201ENSMUST00000052366 UbtfP25976 765 aaKnown RBP19.3■□□□□ 0.68
Pcdhb1-201ENSMUST00000052366 Rapgef2Q8CHG7 1496 aa19.3■□□□□ 0.68
Pcdhb1-201ENSMUST00000052366 Myt1lP97500 1187 aa19.26■□□□□ 0.67
Pcdhb1-201ENSMUST00000052366 Top2aQ01320 1528 aaKnown RBP19.25■□□□□ 0.67
Pcdhb1-201ENSMUST00000052366 Iqgap2Q3UQ44 1575 aa19.19■□□□□ 0.66
Pcdhb1-201ENSMUST00000052366 Cep162Q6ZQ06 1403 aa19.18■□□□□ 0.66
Pcdhb1-201ENSMUST00000052366 Npm2Q80W85 207 aa19.17■□□□□ 0.66
Pcdhb1-201ENSMUST00000052366 Sall2Q9QX96 1004 aa19.15■□□□□ 0.66
Pcdhb1-201ENSMUST00000052366 Neurod1Q60867 357 aa19.14■□□□□ 0.65
Pcdhb1-201ENSMUST00000052366 Las1lA2BE28 776 aaKnown RBP19.03■□□□□ 0.64
Pcdhb1-201ENSMUST00000052366 Atad2bE9Q166 1460 aaKnown RBP19.02■□□□□ 0.63
Pcdhb1-201ENSMUST00000052366 Wdr66E9Q743 1299 aa19■□□□□ 0.63
Pcdhb1-201ENSMUST00000052366 Clip1Q922J3 1391 aa18.97■□□□□ 0.63
Pcdhb1-201ENSMUST00000052366 Plekhg3Q4VAC9 1341 aa18.96■□□□□ 0.63
Pcdhb1-201ENSMUST00000052366 Aebp2Q9Z248 504 aaKnown RBP18.92■□□□□ 0.62
Pcdhb1-201ENSMUST00000052366 Eif4g1Q6NZJ6 1600 aaKnown RBP18.9■□□□□ 0.62
Pcdhb1-201ENSMUST00000052366 Pds5bQ4VA53 1446 aaKnown RBP18.89■□□□□ 0.61
Pcdhb1-201ENSMUST00000052366 TnnQ80Z71 1560 aa18.88■□□□□ 0.61
Pcdhb1-201ENSMUST00000052366 Il27Q8K3I6 234 aa18.84■□□□□ 0.61
Pcdhb1-201ENSMUST00000052366 TonslQ6NZL6 1363 aa18.81■□□□□ 0.6
Pcdhb1-201ENSMUST00000052366 Arhgap35Q91YM2 1499 aa18.8■□□□□ 0.6
Pcdhb1-201ENSMUST00000052366 PtprkP35822 1457 aa18.79■□□□□ 0.6
Pcdhb1-201ENSMUST00000052366 ClspnQ80YR7 1315 aa18.78■□□□□ 0.6
Pcdhb1-201ENSMUST00000052366 Frmpd1A2AKB4 1549 aa18.78■□□□□ 0.6
Pcdhb1-201ENSMUST00000052366 Ppargc1bQ8VHJ7 1014 aa18.78■□□□□ 0.6
Pcdhb1-201ENSMUST00000052366 Ap3b1Q9Z1T1 1105 aa18.75■□□□□ 0.59
Pcdhb1-201ENSMUST00000052366 Wdr62Q3U3T8 1523 aa18.74■□□□□ 0.59
Pcdhb1-201ENSMUST00000052366 Ncapd3Q6ZQK0 1506 aa18.74■□□□□ 0.59
Pcdhb1-201ENSMUST00000052366 Kif15Q6P9L6 1387 aa18.72■□□□□ 0.59
Pcdhb1-201ENSMUST00000052366 Eea1Q8BL66 1411 aa18.71■□□□□ 0.59
Pcdhb1-201ENSMUST00000052366 NrkQ9R0G8 1455 aa18.71■□□□□ 0.59
Pcdhb1-201ENSMUST00000052366 Lamc3Q9R0B6 1581 aa18.7■□□□□ 0.58
Pcdhb1-201ENSMUST00000052366 Arap1Q4LDD4 1452 aa18.69■□□□□ 0.58
Pcdhb1-201ENSMUST00000052366 Anks4bQ8K3X6 423 aa18.67■□□□□ 0.58
Pcdhb1-201ENSMUST00000052366 Setd5Q5XJV7 1441 aa18.65■□□□□ 0.58
Pcdhb1-201ENSMUST00000052366 Shroom4Q1W617 1475 aa18.64■□□□□ 0.58
Pcdhb1-201ENSMUST00000052366 Nop58Q6DFW4 536 aaKnown RBP18.64■□□□□ 0.57
Pcdhb1-201ENSMUST00000052366 Cdk11bP24788 784 aaKnown RBP18.64■□□□□ 0.57
Pcdhb1-201ENSMUST00000052366 Ercc6F8VPZ5 1481 aa18.62■□□□□ 0.57
Pcdhb1-201ENSMUST00000052366 Camsap1A2AHC3 1581 aa18.61■□□□□ 0.57
Pcdhb1-201ENSMUST00000052366 Arhgef5E9Q7D5 1581 aa18.59■□□□□ 0.57
Pcdhb1-201ENSMUST00000052366 Unc13aQ4KUS2 1712 aa18.57■□□□□ 0.56
Pcdhb1-201ENSMUST00000052366 Map3k1P53349 1493 aa18.56■□□□□ 0.56
Pcdhb1-201ENSMUST00000052366 Eid3Q3V124 375 aa18.55■□□□□ 0.56
Pcdhb1-201ENSMUST00000052366 Ccdc18Q640L5 1455 aa18.55■□□□□ 0.56
Pcdhb1-201ENSMUST00000052366 Csrnp3P59055 597 aa18.51■□□□□ 0.55
Pcdhb1-201ENSMUST00000052366 Grin2bQ01097 1482 aa18.51■□□□□ 0.55
Pcdhb1-201ENSMUST00000052366 Tiam1Q60610 1591 aa18.48■□□□□ 0.55
Pcdhb1-201ENSMUST00000052366 Baz1bQ9Z277 1479 aa18.48■□□□□ 0.55
Pcdhb1-201ENSMUST00000052366 Mroh2bQ7M6Y6 1581 aa18.47■□□□□ 0.55
Pcdhb1-201ENSMUST00000052366 BlmO88700 1416 aa18.46■□□□□ 0.55
Pcdhb1-201ENSMUST00000052366 Kdm5bQ80Y84 1544 aa18.44■□□□□ 0.54
Pcdhb1-201ENSMUST00000052366 Naip1Q9QWK5 1403 aa18.42■□□□□ 0.54
Pcdhb1-201ENSMUST00000052366 Ankrd26Q811D2 1581 aa18.41■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms