RNA–Protein interactions for RNA: ENSMUST00000050029.7

Six1-201, Transcript of Homeobox protein SIX1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Six1, Length 3,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six1-201ENSMUST00000050029 NischQ80TM9 1593 aa28.07■■■□□ 2.08
Six1-201ENSMUST00000050029 Gm35339A0A140LHH9 1649 aa27.22■■□□□ 1.95
Six1-201ENSMUST00000050029 Abcc9P70170 1546 aa26.99■■□□□ 1.91
Six1-201ENSMUST00000050029 Abcc8B2RUS7 1588 aa26.68■■□□□ 1.86
Six1-201ENSMUST00000050029 Rhox8Q6VSS7 320 aa26.42■■□□□ 1.82
Six1-201ENSMUST00000050029 DiexfQ8BTT6 772 aaKnown RBP25.49■■□□□ 1.67
Six1-201ENSMUST00000050029 ScribQ80U72 1612 aa25.15■■□□□ 1.62
Six1-201ENSMUST00000050029 Pcgf6Q99NA9 353 aa24.83■■□□□ 1.57
Six1-201ENSMUST00000050029 Amer1Q7TS75 1132 aa24.76■■□□□ 1.55
Six1-201ENSMUST00000050029 Myt1Q8CFC2 1127 aa24.69■■□□□ 1.54
Six1-201ENSMUST00000050029 Kdm5dQ62240 1548 aa24.67■■□□□ 1.54
Six1-201ENSMUST00000050029 Ccdc136Q3TVA9 1136 aa24.62■■□□□ 1.53
Six1-201ENSMUST00000050029 Rpgrip1Q9EPQ2 1331 aa24.59■■□□□ 1.53
Six1-201ENSMUST00000050029 Rb1cc1Q9ESK9 1588 aa24.54■■□□□ 1.52
Six1-201ENSMUST00000050029 Bcl11aQ9QYE3 773 aa24.48■■□□□ 1.51
Six1-201ENSMUST00000050029 CenpbP27790 599 aa24.48■■□□□ 1.51
Six1-201ENSMUST00000050029 NacadQ5SWP3 1504 aa24.44■■□□□ 1.5
Six1-201ENSMUST00000050029 Dcaf1Q80TR8 1506 aa24.38■■□□□ 1.49
Six1-201ENSMUST00000050029 Zcchc6Q5BLK4 1491 aaKnown RBP24.23■■□□□ 1.47
Six1-201ENSMUST00000050029 Plppr3Q7TPB0 716 aa24.13■■□□□ 1.45
Six1-201ENSMUST00000050029 Baz1aO88379 1555 aa24.1■■□□□ 1.45
Six1-201ENSMUST00000050029 Ttbk1Q6PCN3 1308 aa24.08■■□□□ 1.45
Six1-201ENSMUST00000050029 Rtl1Q7M732 1744 aa24.07■■□□□ 1.44
Six1-201ENSMUST00000050029 PrkcshO08795 521 aa24.04■■□□□ 1.44
Six1-201ENSMUST00000050029 Las1lA2BE28 776 aaKnown RBP23.95■■□□□ 1.42
Six1-201ENSMUST00000050029 Sycp2Q9CUU3 1500 aa23.93■■□□□ 1.42
Six1-201ENSMUST00000050029 CatipB9EKE5 520 aa23.82■■□□□ 1.4
Six1-201ENSMUST00000050029 Ccdc180J3QNE4 1664 aa23.81■■□□□ 1.4
Six1-201ENSMUST00000050029 Trim41Q5NCC3 630 aa23.62■■□□□ 1.37
Six1-201ENSMUST00000050029 Ube2uB1AUC4 352 aa23.61■■□□□ 1.37
Six1-201ENSMUST00000050029 Cngb1E1AZ71 1325 aa23.52■■□□□ 1.36
Six1-201ENSMUST00000050029 BicraF8VPZ9 1578 aa23.51■■□□□ 1.35
Six1-201ENSMUST00000050029 Cecr2E9Q2Z1 1453 aa23.48■■□□□ 1.35
Six1-201ENSMUST00000050029 Crybg2B7ZCC2 1516 aa23.47■■□□□ 1.35
Six1-201ENSMUST00000050029 Smarca2Q6DIC0 1577 aa23.46■■□□□ 1.35
Six1-201ENSMUST00000050029 Esf1Q3V1V3 845 aaKnown RBP23.43■■□□□ 1.34
Six1-201ENSMUST00000050029 1700123L14RikQ3V2K7 440 aa23.39■■□□□ 1.34
Six1-201ENSMUST00000050029 Neurod1Q60867 357 aa23.25■■□□□ 1.31
Six1-201ENSMUST00000050029 Ehmt2Q9Z148 1263 aaKnown RBP23.2■■□□□ 1.3
Six1-201ENSMUST00000050029 Gab3Q8BSM5 595 aa23.13■■□□□ 1.29
Six1-201ENSMUST00000050029 Brd4Q9ESU6 1400 aaKnown RBP23.1■■□□□ 1.29
Six1-201ENSMUST00000050029 HrcG5E8J6 738 aa23.1■■□□□ 1.29
Six1-201ENSMUST00000050029 Chic1Q8CBW7 227 aa23.05■■□□□ 1.28
Six1-201ENSMUST00000050029 Pknox2Q8BG99 474 aa23■■□□□ 1.27
Six1-201ENSMUST00000050029 Synj1Q8CHC4 1574 aa23■■□□□ 1.27
Six1-201ENSMUST00000050029 Gm38655A0A286YDK6 273 aa22.95■■□□□ 1.26
Six1-201ENSMUST00000050029 CftrP26361 1476 aa22.88■■□□□ 1.25
Six1-201ENSMUST00000050029 Gtf3c5Q8R2T8 520 aa22.88■■□□□ 1.25
Six1-201ENSMUST00000050029 Acin1Q9JIX8 1338 aaKnown RBP22.81■■□□□ 1.24
Six1-201ENSMUST00000050029 Smarca4Q3TKT4 1613 aaKnown RBP22.79■■□□□ 1.24
Six1-201ENSMUST00000050029 Ifnlr1Q8CGK5 535 aa22.77■■□□□ 1.23
Six1-201ENSMUST00000050029 Rsf1E9PWW9 1441 aaKnown RBP22.74■■□□□ 1.23
Six1-201ENSMUST00000050029 ArxO35085 564 aa22.72■■□□□ 1.23
Six1-201ENSMUST00000050029 Golga3P55937 1487 aa22.71■■□□□ 1.23
Six1-201ENSMUST00000050029 Ccdc88bQ4QRL3 1481 aa22.71■■□□□ 1.23
Six1-201ENSMUST00000050029 Il27Q8K3I6 234 aa22.62■■□□□ 1.21
Six1-201ENSMUST00000050029 Pds5bQ4VA53 1446 aaKnown RBP22.62■■□□□ 1.21
Six1-201ENSMUST00000050029 Iqgap2Q3UQ44 1575 aa22.62■■□□□ 1.21
Six1-201ENSMUST00000050029 Atad2bE9Q166 1460 aaKnown RBP22.61■■□□□ 1.21
Six1-201ENSMUST00000050029 BccipQ9CWI3 316 aa22.6■■□□□ 1.21
Six1-201ENSMUST00000050029 Csrnp3P59055 597 aa22.59■■□□□ 1.21
Six1-201ENSMUST00000050029 Cttnbp2B9EJA2 1648 aa22.57■■□□□ 1.2
Six1-201ENSMUST00000050029 Fgd1P52734 960 aa22.56■■□□□ 1.2
Six1-201ENSMUST00000050029 Cep164Q5DU05 1446 aa22.54■■□□□ 1.2
Six1-201ENSMUST00000050029 NrdcQ8BHG1 1161 aa22.5■■□□□ 1.19
Six1-201ENSMUST00000050029 Aplp2Q06335 707 aa22.48■■□□□ 1.19
Six1-201ENSMUST00000050029 Eif5bQ05D44 1216 aaKnown RBP22.43■■□□□ 1.18
Six1-201ENSMUST00000050029 Myt1lP97500 1187 aa22.42■■□□□ 1.18
Six1-201ENSMUST00000050029 TimelessQ9R1X4 1197 aa22.4■■□□□ 1.18
Six1-201ENSMUST00000050029 Anks4bQ8K3X6 423 aa22.37■■□□□ 1.17
Six1-201ENSMUST00000050029 Npm2Q80W85 207 aa22.36■■□□□ 1.17
Six1-201ENSMUST00000050029 Supt5hO55201 1082 aaKnown RBP22.35■■□□□ 1.17
Six1-201ENSMUST00000050029 Cc2d2aQ8CFW7 1633 aa22.33■■□□□ 1.17
Six1-201ENSMUST00000050029 Frmpd1A2AKB4 1549 aa22.32■■□□□ 1.16
Six1-201ENSMUST00000050029 Ercc6F8VPZ5 1481 aa22.3■■□□□ 1.16
Six1-201ENSMUST00000050029 Ubl4bQ9CQ84 188 aa22.29■■□□□ 1.16
Six1-201ENSMUST00000050029 Dnajc5bQ9CQ94 199 aa22.29■■□□□ 1.16
Six1-201ENSMUST00000050029 Top2bQ64511 1612 aa22.24■■□□□ 1.15
Six1-201ENSMUST00000050029 Hdac5Q9Z2V6 1113 aa22.23■■□□□ 1.15
Six1-201ENSMUST00000050029 Kif15Q6P9L6 1387 aa22.22■■□□□ 1.15
Six1-201ENSMUST00000050029 Wdr62Q3U3T8 1523 aa22.16■■□□□ 1.14
Six1-201ENSMUST00000050029 Zeb1Q64318 1117 aa22.12■■□□□ 1.13
Six1-201ENSMUST00000050029 Fmn1Q05860 1466 aa22.11■■□□□ 1.13
Six1-201ENSMUST00000050029 Scaf1Q5U4C3 1256 aaKnown RBP22.05■■□□□ 1.12
Six1-201ENSMUST00000050029 Znf316Q6PGE4 1016 aa22.03■■□□□ 1.12
Six1-201ENSMUST00000050029 Rsph4aQ8BYM7 716 aa22.03■■□□□ 1.12
Six1-201ENSMUST00000050029 Npm1Q61937 292 aaKnown RBP22.02■■□□□ 1.12
Six1-201ENSMUST00000050029 Phldb1Q6PDH0 1371 aaKnown RBP21.97■■□□□ 1.11
Six1-201ENSMUST00000050029 Ap3b1Q9Z1T1 1105 aa21.91■■□□□ 1.1
Six1-201ENSMUST00000050029 Zfp777B9EKF4 885 aa21.88■■□□□ 1.09
Six1-201ENSMUST00000050029 Rapgef2Q8CHG7 1496 aa21.88■■□□□ 1.09
Six1-201ENSMUST00000050029 Cux2P70298 1426 aa21.88■■□□□ 1.09
Six1-201ENSMUST00000050029 UbtfP25976 765 aaKnown RBP21.86■■□□□ 1.09
Six1-201ENSMUST00000050029 Top2aQ01320 1528 aaKnown RBP21.86■■□□□ 1.09
Six1-201ENSMUST00000050029 Thoc2B1AZI6 1594 aaKnown RBP21.84■■□□□ 1.09
Six1-201ENSMUST00000050029 Unc13aQ4KUS2 1712 aa21.84■■□□□ 1.09
Six1-201ENSMUST00000050029 Cdk11bP24788 784 aaKnown RBP21.79■■□□□ 1.08
Six1-201ENSMUST00000050029 PtprkP35822 1457 aa21.78■■□□□ 1.08
Six1-201ENSMUST00000050029 Fam71e1A1L3C1 212 aa21.77■■□□□ 1.08
Six1-201ENSMUST00000050029 Cep162Q6ZQ06 1403 aa21.76■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms