RNA–Protein interactions for RNA: ENSMUST00000050029.7

Six1-201, Transcript of Homeobox protein SIX1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Six1, Length 3,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six1-201ENSMUST00000050029 NischQ80TM9 1593 aa28,07■■■□□ 2,08
Six1-201ENSMUST00000050029 Gm35339A0A140LHH9 1649 aa27,22■■□□□ 1,95
Six1-201ENSMUST00000050029 Abcc9P70170 1546 aa26,99■■□□□ 1,91
Six1-201ENSMUST00000050029 Abcc8B2RUS7 1588 aa26,68■■□□□ 1,86
Six1-201ENSMUST00000050029 Rhox8Q6VSS7 320 aa26,42■■□□□ 1,82
Six1-201ENSMUST00000050029 DiexfQ8BTT6 772 aaKnown RBP25,49■■□□□ 1,67
Six1-201ENSMUST00000050029 ScribQ80U72 1612 aa25,15■■□□□ 1,62
Six1-201ENSMUST00000050029 Pcgf6Q99NA9 353 aa24,83■■□□□ 1,57
Six1-201ENSMUST00000050029 Amer1Q7TS75 1132 aa24,76■■□□□ 1,55
Six1-201ENSMUST00000050029 Myt1Q8CFC2 1127 aa24,69■■□□□ 1,54
Six1-201ENSMUST00000050029 Kdm5dQ62240 1548 aa24,67■■□□□ 1,54
Six1-201ENSMUST00000050029 Ccdc136Q3TVA9 1136 aa24,62■■□□□ 1,53
Six1-201ENSMUST00000050029 Rpgrip1Q9EPQ2 1331 aa24,59■■□□□ 1,53
Six1-201ENSMUST00000050029 Rb1cc1Q9ESK9 1588 aa24,54■■□□□ 1,52
Six1-201ENSMUST00000050029 Bcl11aQ9QYE3 773 aa24,48■■□□□ 1,51
Six1-201ENSMUST00000050029 CenpbP27790 599 aa24,48■■□□□ 1,51
Six1-201ENSMUST00000050029 NacadQ5SWP3 1504 aa24,44■■□□□ 1,5
Six1-201ENSMUST00000050029 Dcaf1Q80TR8 1506 aa24,38■■□□□ 1,49
Six1-201ENSMUST00000050029 Zcchc6Q5BLK4 1491 aaKnown RBP24,23■■□□□ 1,47
Six1-201ENSMUST00000050029 Plppr3Q7TPB0 716 aa24,13■■□□□ 1,45
Six1-201ENSMUST00000050029 Baz1aO88379 1555 aa24,1■■□□□ 1,45
Six1-201ENSMUST00000050029 Ttbk1Q6PCN3 1308 aa24,08■■□□□ 1,45
Six1-201ENSMUST00000050029 Rtl1Q7M732 1744 aa24,07■■□□□ 1,44
Six1-201ENSMUST00000050029 PrkcshO08795 521 aa24,04■■□□□ 1,44
Six1-201ENSMUST00000050029 Las1lA2BE28 776 aaKnown RBP23,95■■□□□ 1,42
Six1-201ENSMUST00000050029 Sycp2Q9CUU3 1500 aa23,93■■□□□ 1,42
Six1-201ENSMUST00000050029 CatipB9EKE5 520 aa23,82■■□□□ 1,4
Six1-201ENSMUST00000050029 Ccdc180J3QNE4 1664 aa23,81■■□□□ 1,4
Six1-201ENSMUST00000050029 Trim41Q5NCC3 630 aa23,62■■□□□ 1,37
Six1-201ENSMUST00000050029 Ube2uB1AUC4 352 aa23,61■■□□□ 1,37
Six1-201ENSMUST00000050029 Cngb1E1AZ71 1325 aa23,52■■□□□ 1,36
Six1-201ENSMUST00000050029 BicraF8VPZ9 1578 aa23,51■■□□□ 1,35
Six1-201ENSMUST00000050029 Cecr2E9Q2Z1 1453 aa23,48■■□□□ 1,35
Six1-201ENSMUST00000050029 Crybg2B7ZCC2 1516 aa23,47■■□□□ 1,35
Six1-201ENSMUST00000050029 Smarca2Q6DIC0 1577 aa23,46■■□□□ 1,35
Six1-201ENSMUST00000050029 Esf1Q3V1V3 845 aaKnown RBP23,43■■□□□ 1,34
Six1-201ENSMUST00000050029 1700123L14RikQ3V2K7 440 aa23,39■■□□□ 1,34
Six1-201ENSMUST00000050029 Neurod1Q60867 357 aa23,25■■□□□ 1,31
Six1-201ENSMUST00000050029 Ehmt2Q9Z148 1263 aaKnown RBP23,2■■□□□ 1,3
Six1-201ENSMUST00000050029 Gab3Q8BSM5 595 aa23,13■■□□□ 1,29
Six1-201ENSMUST00000050029 Brd4Q9ESU6 1400 aaKnown RBP23,1■■□□□ 1,29
Six1-201ENSMUST00000050029 HrcG5E8J6 738 aa23,1■■□□□ 1,29
Six1-201ENSMUST00000050029 Chic1Q8CBW7 227 aa23,05■■□□□ 1,28
Six1-201ENSMUST00000050029 Pknox2Q8BG99 474 aa23■■□□□ 1,27
Six1-201ENSMUST00000050029 Synj1Q8CHC4 1574 aa23■■□□□ 1,27
Six1-201ENSMUST00000050029 Gm38655A0A286YDK6 273 aa22,95■■□□□ 1,26
Six1-201ENSMUST00000050029 CftrP26361 1476 aa22,88■■□□□ 1,25
Six1-201ENSMUST00000050029 Gtf3c5Q8R2T8 520 aa22,88■■□□□ 1,25
Six1-201ENSMUST00000050029 Acin1Q9JIX8 1338 aaKnown RBP22,81■■□□□ 1,24
Six1-201ENSMUST00000050029 Smarca4Q3TKT4 1613 aaKnown RBP22,79■■□□□ 1,24
Six1-201ENSMUST00000050029 Ifnlr1Q8CGK5 535 aa22,77■■□□□ 1,23
Six1-201ENSMUST00000050029 Rsf1E9PWW9 1441 aaKnown RBP22,74■■□□□ 1,23
Six1-201ENSMUST00000050029 ArxO35085 564 aa22,72■■□□□ 1,23
Six1-201ENSMUST00000050029 Golga3P55937 1487 aa22,71■■□□□ 1,23
Six1-201ENSMUST00000050029 Ccdc88bQ4QRL3 1481 aa22,71■■□□□ 1,23
Six1-201ENSMUST00000050029 Il27Q8K3I6 234 aa22,62■■□□□ 1,21
Six1-201ENSMUST00000050029 Pds5bQ4VA53 1446 aaKnown RBP22,62■■□□□ 1,21
Six1-201ENSMUST00000050029 Iqgap2Q3UQ44 1575 aa22,62■■□□□ 1,21
Six1-201ENSMUST00000050029 Atad2bE9Q166 1460 aaKnown RBP22,61■■□□□ 1,21
Six1-201ENSMUST00000050029 BccipQ9CWI3 316 aa22,6■■□□□ 1,21
Six1-201ENSMUST00000050029 Csrnp3P59055 597 aa22,59■■□□□ 1,21
Six1-201ENSMUST00000050029 Cttnbp2B9EJA2 1648 aa22,57■■□□□ 1,2
Six1-201ENSMUST00000050029 Fgd1P52734 960 aa22,56■■□□□ 1,2
Six1-201ENSMUST00000050029 Cep164Q5DU05 1446 aa22,54■■□□□ 1,2
Six1-201ENSMUST00000050029 NrdcQ8BHG1 1161 aa22,5■■□□□ 1,19
Six1-201ENSMUST00000050029 Aplp2Q06335 707 aa22,48■■□□□ 1,19
Six1-201ENSMUST00000050029 Eif5bQ05D44 1216 aaKnown RBP22,43■■□□□ 1,18
Six1-201ENSMUST00000050029 Myt1lP97500 1187 aa22,42■■□□□ 1,18
Six1-201ENSMUST00000050029 TimelessQ9R1X4 1197 aa22,4■■□□□ 1,18
Six1-201ENSMUST00000050029 Anks4bQ8K3X6 423 aa22,37■■□□□ 1,17
Six1-201ENSMUST00000050029 Npm2Q80W85 207 aa22,36■■□□□ 1,17
Six1-201ENSMUST00000050029 Supt5hO55201 1082 aaKnown RBP22,35■■□□□ 1,17
Six1-201ENSMUST00000050029 Cc2d2aQ8CFW7 1633 aa22,33■■□□□ 1,17
Six1-201ENSMUST00000050029 Frmpd1A2AKB4 1549 aa22,32■■□□□ 1,16
Six1-201ENSMUST00000050029 Ercc6F8VPZ5 1481 aa22,3■■□□□ 1,16
Six1-201ENSMUST00000050029 Ubl4bQ9CQ84 188 aa22,29■■□□□ 1,16
Six1-201ENSMUST00000050029 Dnajc5bQ9CQ94 199 aa22,29■■□□□ 1,16
Six1-201ENSMUST00000050029 Top2bQ64511 1612 aa22,24■■□□□ 1,15
Six1-201ENSMUST00000050029 Hdac5Q9Z2V6 1113 aa22,23■■□□□ 1,15
Six1-201ENSMUST00000050029 Kif15Q6P9L6 1387 aa22,22■■□□□ 1,15
Six1-201ENSMUST00000050029 Wdr62Q3U3T8 1523 aa22,16■■□□□ 1,14
Six1-201ENSMUST00000050029 Zeb1Q64318 1117 aa22,12■■□□□ 1,13
Six1-201ENSMUST00000050029 Fmn1Q05860 1466 aa22,11■■□□□ 1,13
Six1-201ENSMUST00000050029 Scaf1Q5U4C3 1256 aaKnown RBP22,05■■□□□ 1,12
Six1-201ENSMUST00000050029 Znf316Q6PGE4 1016 aa22,03■■□□□ 1,12
Six1-201ENSMUST00000050029 Rsph4aQ8BYM7 716 aa22,03■■□□□ 1,12
Six1-201ENSMUST00000050029 Npm1Q61937 292 aaKnown RBP22,02■■□□□ 1,12
Six1-201ENSMUST00000050029 Phldb1Q6PDH0 1371 aaKnown RBP21,97■■□□□ 1,11
Six1-201ENSMUST00000050029 Ap3b1Q9Z1T1 1105 aa21,91■■□□□ 1,1
Six1-201ENSMUST00000050029 Zfp777B9EKF4 885 aa21,88■■□□□ 1,09
Six1-201ENSMUST00000050029 Rapgef2Q8CHG7 1496 aa21,88■■□□□ 1,09
Six1-201ENSMUST00000050029 Cux2P70298 1426 aa21,88■■□□□ 1,09
Six1-201ENSMUST00000050029 UbtfP25976 765 aaKnown RBP21,86■■□□□ 1,09
Six1-201ENSMUST00000050029 Top2aQ01320 1528 aaKnown RBP21,86■■□□□ 1,09
Six1-201ENSMUST00000050029 Thoc2B1AZI6 1594 aaKnown RBP21,84■■□□□ 1,09
Six1-201ENSMUST00000050029 Unc13aQ4KUS2 1712 aa21,84■■□□□ 1,09
Six1-201ENSMUST00000050029 Cdk11bP24788 784 aaKnown RBP21,79■■□□□ 1,08
Six1-201ENSMUST00000050029 PtprkP35822 1457 aa21,78■■□□□ 1,08
Six1-201ENSMUST00000050029 Fam71e1A1L3C1 212 aa21,77■■□□□ 1,08
Six1-201ENSMUST00000050029 Cep162Q6ZQ06 1403 aa21,76■■□□□ 1,07
Retrieved 100 of 22,080 RNA–protein pairs in 9,7 ms