RNA–Protein interactions for RNA: ENSMUST00000049941.11

Scn3b-201, Transcript of Sodium channel subunit beta-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn3b, Length 4,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3b-201ENSMUST00000049941 Rhox8Q6VSS7 320 aa15.57■□□□□ 0.08
Scn3b-201ENSMUST00000049941 NischQ80TM9 1593 aa15.36■□□□□ 0.05
Scn3b-201ENSMUST00000049941 Abcc9P70170 1546 aa14.59□□□□□ -0.07
Scn3b-201ENSMUST00000049941 Abcc8B2RUS7 1588 aa14.39□□□□□ -0.11
Scn3b-201ENSMUST00000049941 Gm35339A0A140LHH9 1649 aa14.28□□□□□ -0.12
Scn3b-201ENSMUST00000049941 Ccdc136Q3TVA9 1136 aa14.21□□□□□ -0.13
Scn3b-201ENSMUST00000049941 Trim41Q5NCC3 630 aa13.82□□□□□ -0.2
Scn3b-201ENSMUST00000049941 Esf1Q3V1V3 845 aaKnown RBP13.81□□□□□ -0.2
Scn3b-201ENSMUST00000049941 Cngb1E1AZ71 1325 aa13.77□□□□□ -0.21
Scn3b-201ENSMUST00000049941 Zcchc6Q5BLK4 1491 aaKnown RBP13.69□□□□□ -0.22
Scn3b-201ENSMUST00000049941 Ehmt2Q9Z148 1263 aaKnown RBP13.56□□□□□ -0.24
Scn3b-201ENSMUST00000049941 Gab3Q8BSM5 595 aa13.53□□□□□ -0.24
Scn3b-201ENSMUST00000049941 Rb1cc1Q9ESK9 1588 aa13.44□□□□□ -0.26
Scn3b-201ENSMUST00000049941 Rtl1Q7M732 1744 aa13.43□□□□□ -0.26
Scn3b-201ENSMUST00000049941 Ccdc180J3QNE4 1664 aa13.42□□□□□ -0.26
Scn3b-201ENSMUST00000049941 NacadQ5SWP3 1504 aa13.42□□□□□ -0.26
Scn3b-201ENSMUST00000049941 Kdm5dQ62240 1548 aa13.32□□□□□ -0.28
Scn3b-201ENSMUST00000049941 HrcG5E8J6 738 aa13.31□□□□□ -0.28
Scn3b-201ENSMUST00000049941 Npm2Q80W85 207 aa13.28□□□□□ -0.28
Scn3b-201ENSMUST00000049941 Dcaf1Q80TR8 1506 aa13.23□□□□□ -0.29
Scn3b-201ENSMUST00000049941 ScribQ80U72 1612 aa13.23□□□□□ -0.29
Scn3b-201ENSMUST00000049941 Zeb1Q64318 1117 aa13.23□□□□□ -0.29
Scn3b-201ENSMUST00000049941 Myt1lP97500 1187 aa13.22□□□□□ -0.29
Scn3b-201ENSMUST00000049941 Baz1aO88379 1555 aa13.19□□□□□ -0.3
Scn3b-201ENSMUST00000049941 Il27Q8K3I6 234 aa13.19□□□□□ -0.3
Scn3b-201ENSMUST00000049941 Brd4Q9ESU6 1400 aaKnown RBP13.07□□□□□ -0.32
Scn3b-201ENSMUST00000049941 Rpgrip1Q9EPQ2 1331 aa13.06□□□□□ -0.32
Scn3b-201ENSMUST00000049941 Sycp2Q9CUU3 1500 aa12.98□□□□□ -0.33
Scn3b-201ENSMUST00000049941 Chic1Q8CBW7 227 aa12.93□□□□□ -0.34
Scn3b-201ENSMUST00000049941 UbtfP25976 765 aaKnown RBP12.86□□□□□ -0.35
Scn3b-201ENSMUST00000049941 Npm1Q61937 292 aaKnown RBP12.83□□□□□ -0.36
Scn3b-201ENSMUST00000049941 Crybg2B7ZCC2 1516 aa12.8□□□□□ -0.36
Scn3b-201ENSMUST00000049941 Acin1Q9JIX8 1338 aaKnown RBP12.77□□□□□ -0.36
Scn3b-201ENSMUST00000049941 Ubl4bQ9CQ84 188 aa12.77□□□□□ -0.37
Scn3b-201ENSMUST00000049941 Ube2uB1AUC4 352 aa12.75□□□□□ -0.37
Scn3b-201ENSMUST00000049941 Ap3b1Q9Z1T1 1105 aa12.75□□□□□ -0.37
Scn3b-201ENSMUST00000049941 Cep164Q5DU05 1446 aa12.74□□□□□ -0.37
Scn3b-201ENSMUST00000049941 Cecr2E9Q2Z1 1453 aa12.73□□□□□ -0.37
Scn3b-201ENSMUST00000049941 Golga3P55937 1487 aa12.71□□□□□ -0.37
Scn3b-201ENSMUST00000049941 Smarca2Q6DIC0 1577 aa12.68□□□□□ -0.38
Scn3b-201ENSMUST00000049941 Pds5bQ4VA53 1446 aaKnown RBP12.65□□□□□ -0.39
Scn3b-201ENSMUST00000049941 Las1lA2BE28 776 aaKnown RBP12.64□□□□□ -0.39
Scn3b-201ENSMUST00000049941 Wdr66E9Q743 1299 aa12.61□□□□□ -0.39
Scn3b-201ENSMUST00000049941 Rsf1E9PWW9 1441 aaKnown RBP12.6□□□□□ -0.39
Scn3b-201ENSMUST00000049941 Kif15Q6P9L6 1387 aa12.59□□□□□ -0.39
Scn3b-201ENSMUST00000049941 Ercc6F8VPZ5 1481 aa12.59□□□□□ -0.39
Scn3b-201ENSMUST00000049941 CftrP26361 1476 aa12.58□□□□□ -0.39
Scn3b-201ENSMUST00000049941 Plekhg3Q4VAC9 1341 aa12.55□□□□□ -0.4
Scn3b-201ENSMUST00000049941 NefmP08553 848 aa12.54□□□□□ -0.4
Scn3b-201ENSMUST00000049941 Ccdc88bQ4QRL3 1481 aa12.52□□□□□ -0.41
Scn3b-201ENSMUST00000049941 Atad2bE9Q166 1460 aaKnown RBP12.5□□□□□ -0.41
Scn3b-201ENSMUST00000049941 Lmod2Q3UHZ5 550 aa12.5□□□□□ -0.41
Scn3b-201ENSMUST00000049941 Synj1Q8CHC4 1574 aa12.5□□□□□ -0.41
Scn3b-201ENSMUST00000049941 Fam50aQ9WV03 339 aaKnown RBP12.49□□□□□ -0.41
Scn3b-201ENSMUST00000049941 Smarca4Q3TKT4 1613 aaKnown RBP12.46□□□□□ -0.42
Scn3b-201ENSMUST00000049941 Mier1Q5UAK0 511 aa12.45□□□□□ -0.42
Scn3b-201ENSMUST00000049941 Clip1Q922J3 1391 aa12.45□□□□□ -0.42
Scn3b-201ENSMUST00000049941 BicraF8VPZ9 1578 aa12.43□□□□□ -0.42
Scn3b-201ENSMUST00000049941 Ccdc18Q640L5 1455 aa12.36□□□□□ -0.43
Scn3b-201ENSMUST00000049941 Fmn1Q05860 1466 aa12.36□□□□□ -0.43
Scn3b-201ENSMUST00000049941 Iqgap2Q3UQ44 1575 aa12.34□□□□□ -0.43
Scn3b-201ENSMUST00000049941 Cttnbp2B9EJA2 1648 aa12.32□□□□□ -0.44
Scn3b-201ENSMUST00000049941 Phldb1Q6PDH0 1371 aaKnown RBP12.31□□□□□ -0.44
Scn3b-201ENSMUST00000049941 Fkbp15Q6P9Q6 1216 aaKnown RBP12.28□□□□□ -0.44
Scn3b-201ENSMUST00000049941 Setd5Q5XJV7 1441 aa12.27□□□□□ -0.44
Scn3b-201ENSMUST00000049941 Cux2P70298 1426 aa12.27□□□□□ -0.45
Scn3b-201ENSMUST00000049941 Ifnlr1Q8CGK5 535 aa12.24□□□□□ -0.45
Scn3b-201ENSMUST00000049941 BlmO88700 1416 aa12.2□□□□□ -0.46
Scn3b-201ENSMUST00000049941 Cep162Q6ZQ06 1403 aa12.2□□□□□ -0.46
Scn3b-201ENSMUST00000049941 Ppargc1bQ8VHJ7 1014 aa12.2□□□□□ -0.46
Scn3b-201ENSMUST00000049941 Eid3Q3V124 375 aa12.18□□□□□ -0.46
Scn3b-201ENSMUST00000049941 Neurod1Q60867 357 aa12.18□□□□□ -0.46
Scn3b-201ENSMUST00000049941 TonslQ6NZL6 1363 aa12.18□□□□□ -0.46
Scn3b-201ENSMUST00000049941 Eea1Q8BL66 1411 aa12.16□□□□□ -0.46
Scn3b-201ENSMUST00000049941 NclP09405 707 aaKnown RBP12.15□□□□□ -0.46
Scn3b-201ENSMUST00000049941 Zbtb7cQ8VCZ7 619 aa12.15□□□□□ -0.46
Scn3b-201ENSMUST00000049941 Pcgf6Q99NA9 353 aa12.15□□□□□ -0.46
Scn3b-201ENSMUST00000049941 Frmpd1A2AKB4 1549 aa12.13□□□□□ -0.47
Scn3b-201ENSMUST00000049941 Rapgef2Q8CHG7 1496 aa12.12□□□□□ -0.47
Scn3b-201ENSMUST00000049941 Supt5hO55201 1082 aaKnown RBP12.11□□□□□ -0.47
Scn3b-201ENSMUST00000049941 Pelp1Q9DBD5 1123 aaKnown RBP12.11□□□□□ -0.47
Scn3b-201ENSMUST00000049941 Arhgap27A2AB59 869 aa12.1□□□□□ -0.47
Scn3b-201ENSMUST00000049941 LrpprcQ6PB66 1392 aaKnown RBP12.09□□□□□ -0.47
Scn3b-201ENSMUST00000049941 Chic2Q9D9G3 165 aa12.08□□□□□ -0.47
Scn3b-201ENSMUST00000049941 Baz1bQ9Z277 1479 aa12.05□□□□□ -0.48
Scn3b-201ENSMUST00000049941 Dhx29Q6PGC1 1365 aaKnown RBP12.05□□□□□ -0.48
Scn3b-201ENSMUST00000049941 Cc2d2aQ8CFW7 1633 aa12.04□□□□□ -0.48
Scn3b-201ENSMUST00000049941 Hnrnpul2Q00PI9 745 aaKnown RBP12.04□□□□□ -0.48
Scn3b-201ENSMUST00000049941 Slc24a1Q91WD8 1130 aa12.01□□□□□ -0.49
Scn3b-201ENSMUST00000049941 Dnajc5bQ9CQ94 199 aa12□□□□□ -0.49
Scn3b-201ENSMUST00000049941 Wdr62Q3U3T8 1523 aa12□□□□□ -0.49
Scn3b-201ENSMUST00000049941 Aebp1Q640N1 1128 aa11.98□□□□□ -0.49
Scn3b-201ENSMUST00000049941 Top2aQ01320 1528 aaKnown RBP11.95□□□□□ -0.5
Scn3b-201ENSMUST00000049941 Carmil1Q6EDY6 1374 aa11.94□□□□□ -0.5
Scn3b-201ENSMUST00000049941 Top2bQ64511 1612 aa11.93□□□□□ -0.5
Scn3b-201ENSMUST00000049941 Ccer2J3QPU5 274 aa11.93□□□□□ -0.5
Scn3b-201ENSMUST00000049941 Os9Q8K2C7 672 aa11.93□□□□□ -0.5
Scn3b-201ENSMUST00000049941 Rpap1Q80TE0 1409 aa11.92□□□□□ -0.5
Scn3b-201ENSMUST00000049941 Kif27Q7M6Z4 1394 aa11.91□□□□□ -0.5
Scn3b-201ENSMUST00000049941 Efcab5A0JP43 1406 aa11.9□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms