RNA–Protein interactions for RNA: ENSMUST00000046898.15

Rfx3-201, Transcript of Transcription factor RFX3, mousemouse

TSL 1 (best) BASIC

Gene Rfx3, Length 4,274 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3-201ENSMUST00000046898 Rhox8Q6VSS7 320 aa11.98□□□□□ -0.49
Rfx3-201ENSMUST00000046898 NischQ80TM9 1593 aa11.97□□□□□ -0.49
Rfx3-201ENSMUST00000046898 Abcc9P70170 1546 aa11.39□□□□□ -0.59
Rfx3-201ENSMUST00000046898 Gm35339A0A140LHH9 1649 aa11.25□□□□□ -0.61
Rfx3-201ENSMUST00000046898 Abcc8B2RUS7 1588 aa11.21□□□□□ -0.61
Rfx3-201ENSMUST00000046898 Ccdc136Q3TVA9 1136 aa10.87□□□□□ -0.67
Rfx3-201ENSMUST00000046898 Trim41Q5NCC3 630 aa10.77□□□□□ -0.69
Rfx3-201ENSMUST00000046898 Esf1Q3V1V3 845 aaKnown RBP10.7□□□□□ -0.7
Rfx3-201ENSMUST00000046898 Rtl1Q7M732 1744 aa10.64□□□□□ -0.71
Rfx3-201ENSMUST00000046898 Zcchc6Q5BLK4 1491 aaKnown RBP10.61□□□□□ -0.71
Rfx3-201ENSMUST00000046898 Cngb1E1AZ71 1325 aa10.61□□□□□ -0.71
Rfx3-201ENSMUST00000046898 Ccdc180J3QNE4 1664 aa10.53□□□□□ -0.72
Rfx3-201ENSMUST00000046898 NacadQ5SWP3 1504 aa10.52□□□□□ -0.72
Rfx3-201ENSMUST00000046898 Rb1cc1Q9ESK9 1588 aa10.48□□□□□ -0.73
Rfx3-201ENSMUST00000046898 Dcaf1Q80TR8 1506 aa10.44□□□□□ -0.74
Rfx3-201ENSMUST00000046898 Kdm5dQ62240 1548 aa10.37□□□□□ -0.75
Rfx3-201ENSMUST00000046898 HrcG5E8J6 738 aa10.35□□□□□ -0.75
Rfx3-201ENSMUST00000046898 Gab3Q8BSM5 595 aa10.33□□□□□ -0.76
Rfx3-201ENSMUST00000046898 Baz1aO88379 1555 aa10.32□□□□□ -0.76
Rfx3-201ENSMUST00000046898 Npm2Q80W85 207 aa10.28□□□□□ -0.76
Rfx3-201ENSMUST00000046898 Rpgrip1Q9EPQ2 1331 aa10.28□□□□□ -0.76
Rfx3-201ENSMUST00000046898 ScribQ80U72 1612 aa10.27□□□□□ -0.77
Rfx3-201ENSMUST00000046898 Zeb1Q64318 1117 aa10.25□□□□□ -0.77
Rfx3-201ENSMUST00000046898 Brd4Q9ESU6 1400 aaKnown RBP10.24□□□□□ -0.77
Rfx3-201ENSMUST00000046898 Ehmt2Q9Z148 1263 aaKnown RBP10.18□□□□□ -0.78
Rfx3-201ENSMUST00000046898 Myt1lP97500 1187 aa10.15□□□□□ -0.78
Rfx3-201ENSMUST00000046898 Sycp2Q9CUU3 1500 aa10.14□□□□□ -0.79
Rfx3-201ENSMUST00000046898 Il27Q8K3I6 234 aa10.13□□□□□ -0.79
Rfx3-201ENSMUST00000046898 Crybg2B7ZCC2 1516 aa10.1□□□□□ -0.79
Rfx3-201ENSMUST00000046898 Las1lA2BE28 776 aaKnown RBP10.04□□□□□ -0.8
Rfx3-201ENSMUST00000046898 Npm1Q61937 292 aaKnown RBP9.99□□□□□ -0.81
Rfx3-201ENSMUST00000046898 Pds5bQ4VA53 1446 aaKnown RBP9.95□□□□□ -0.82
Rfx3-201ENSMUST00000046898 Ercc6F8VPZ5 1481 aa9.91□□□□□ -0.82
Rfx3-201ENSMUST00000046898 Cep164Q5DU05 1446 aa9.91□□□□□ -0.82
Rfx3-201ENSMUST00000046898 Ubl4bQ9CQ84 188 aa9.91□□□□□ -0.82
Rfx3-201ENSMUST00000046898 Smarca2Q6DIC0 1577 aa9.89□□□□□ -0.83
Rfx3-201ENSMUST00000046898 Golga3P55937 1487 aa9.89□□□□□ -0.83
Rfx3-201ENSMUST00000046898 Chic1Q8CBW7 227 aa9.86□□□□□ -0.83
Rfx3-201ENSMUST00000046898 Ube2uB1AUC4 352 aa9.85□□□□□ -0.83
Rfx3-201ENSMUST00000046898 UbtfP25976 765 aaKnown RBP9.84□□□□□ -0.83
Rfx3-201ENSMUST00000046898 Rsf1E9PWW9 1441 aaKnown RBP9.83□□□□□ -0.84
Rfx3-201ENSMUST00000046898 Acin1Q9JIX8 1338 aaKnown RBP9.82□□□□□ -0.84
Rfx3-201ENSMUST00000046898 Cecr2E9Q2Z1 1453 aa9.8□□□□□ -0.84
Rfx3-201ENSMUST00000046898 Atad2bE9Q166 1460 aaKnown RBP9.8□□□□□ -0.84
Rfx3-201ENSMUST00000046898 Kif15Q6P9L6 1387 aa9.78□□□□□ -0.84
Rfx3-201ENSMUST00000046898 CftrP26361 1476 aa9.78□□□□□ -0.84
Rfx3-201ENSMUST00000046898 Smarca4Q3TKT4 1613 aaKnown RBP9.76□□□□□ -0.85
Rfx3-201ENSMUST00000046898 NefmP08553 848 aa9.76□□□□□ -0.85
Rfx3-201ENSMUST00000046898 DiexfQ8BTT6 772 aaKnown RBP9.74□□□□□ -0.85
Rfx3-201ENSMUST00000046898 CenpbP27790 599 aa9.73□□□□□ -0.85
Rfx3-201ENSMUST00000046898 Ap3b1Q9Z1T1 1105 aa9.73□□□□□ -0.85
Rfx3-201ENSMUST00000046898 Pcgf6Q99NA9 353 aa9.71□□□□□ -0.85
Rfx3-201ENSMUST00000046898 Ccdc18Q640L5 1455 aa9.71□□□□□ -0.86
Rfx3-201ENSMUST00000046898 Synj1Q8CHC4 1574 aa9.69□□□□□ -0.86
Rfx3-201ENSMUST00000046898 Amer1Q7TS75 1132 aa9.67□□□□□ -0.86
Rfx3-201ENSMUST00000046898 Cttnbp2B9EJA2 1648 aa9.67□□□□□ -0.86
Rfx3-201ENSMUST00000046898 Wdr66E9Q743 1299 aa9.67□□□□□ -0.86
Rfx3-201ENSMUST00000046898 Fmn1Q05860 1466 aa9.66□□□□□ -0.86
Rfx3-201ENSMUST00000046898 BicraF8VPZ9 1578 aa9.65□□□□□ -0.86
Rfx3-201ENSMUST00000046898 Phldb1Q6PDH0 1371 aaKnown RBP9.64□□□□□ -0.87
Rfx3-201ENSMUST00000046898 Iqgap2Q3UQ44 1575 aa9.64□□□□□ -0.87
Rfx3-201ENSMUST00000046898 Clip1Q922J3 1391 aa9.62□□□□□ -0.87
Rfx3-201ENSMUST00000046898 Myt1Q8CFC2 1127 aa9.61□□□□□ -0.87
Rfx3-201ENSMUST00000046898 Fam50aQ9WV03 339 aaKnown RBP9.61□□□□□ -0.87
Rfx3-201ENSMUST00000046898 Ccdc88bQ4QRL3 1481 aa9.6□□□□□ -0.87
Rfx3-201ENSMUST00000046898 Plekhg3Q4VAC9 1341 aa9.59□□□□□ -0.87
Rfx3-201ENSMUST00000046898 Lmod2Q3UHZ5 550 aa9.56□□□□□ -0.88
Rfx3-201ENSMUST00000046898 Cux2P70298 1426 aa9.53□□□□□ -0.88
Rfx3-201ENSMUST00000046898 Mier1Q5UAK0 511 aa9.51□□□□□ -0.89
Rfx3-201ENSMUST00000046898 Setd5Q5XJV7 1441 aa9.51□□□□□ -0.89
Rfx3-201ENSMUST00000046898 NclP09405 707 aaKnown RBP9.5□□□□□ -0.89
Rfx3-201ENSMUST00000046898 Eea1Q8BL66 1411 aa9.47□□□□□ -0.89
Rfx3-201ENSMUST00000046898 Cep162Q6ZQ06 1403 aa9.44□□□□□ -0.9
Rfx3-201ENSMUST00000046898 BlmO88700 1416 aa9.43□□□□□ -0.9
Rfx3-201ENSMUST00000046898 Frmpd1A2AKB4 1549 aa9.43□□□□□ -0.9
Rfx3-201ENSMUST00000046898 LrpprcQ6PB66 1392 aaKnown RBP9.42□□□□□ -0.9
Rfx3-201ENSMUST00000046898 Fkbp15Q6P9Q6 1216 aaKnown RBP9.41□□□□□ -0.9
Rfx3-201ENSMUST00000046898 TonslQ6NZL6 1363 aa9.4□□□□□ -0.9
Rfx3-201ENSMUST00000046898 Supt5hO55201 1082 aaKnown RBP9.39□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Wdr62Q3U3T8 1523 aa9.39□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Pelp1Q9DBD5 1123 aaKnown RBP9.38□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Ifnlr1Q8CGK5 535 aa9.38□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Neurod1Q60867 357 aa9.37□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Ccer2J3QPU5 274 aa9.36□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Cdk11bP24788 784 aaKnown RBP9.36□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Dhx29Q6PGC1 1365 aaKnown RBP9.36□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Baz1bQ9Z277 1479 aa9.36□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Arhgap27A2AB59 869 aa9.35□□□□□ -0.91
Rfx3-201ENSMUST00000046898 Rapgef2Q8CHG7 1496 aa9.34□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Cc2d2aQ8CFW7 1633 aa9.33□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Ttbk1Q6PCN3 1308 aa9.33□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Carmil1Q6EDY6 1374 aa9.32□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Top2aQ01320 1528 aaKnown RBP9.31□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Top2bQ64511 1612 aa9.31□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Efcab5A0JP43 1406 aa9.31□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Mrc2Q64449 1479 aa9.29□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Stra8P70278 393 aa9.28□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Hnrnpul2Q00PI9 745 aaKnown RBP9.28□□□□□ -0.92
Rfx3-201ENSMUST00000046898 Zbtb7cQ8VCZ7 619 aa9.27□□□□□ -0.93
Rfx3-201ENSMUST00000046898 Shroom4Q1W617 1475 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms