RNA–Protein interactions for RNA: ENSMUST00000045970.7

Gpc1-201, Transcript of Glypican-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gpc1, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc1-201ENSMUST00000045970 NischQ80TM9 1593 aa27.13■■□□□ 1.93
Gpc1-201ENSMUST00000045970 Rhox8Q6VSS7 320 aa26.81■■□□□ 1.88
Gpc1-201ENSMUST00000045970 Abcc9P70170 1546 aa25.86■■□□□ 1.73
Gpc1-201ENSMUST00000045970 Rpgrip1Q9EPQ2 1331 aa25.8■■□□□ 1.72
Gpc1-201ENSMUST00000045970 Gm35339A0A140LHH9 1649 aa25.76■■□□□ 1.71
Gpc1-201ENSMUST00000045970 Abcc8B2RUS7 1588 aa25.67■■□□□ 1.7
Gpc1-201ENSMUST00000045970 Ehmt2Q9Z148 1263 aaKnown RBP25.63■■□□□ 1.69
Gpc1-201ENSMUST00000045970 Las1lA2BE28 776 aaKnown RBP24.67■■□□□ 1.54
Gpc1-201ENSMUST00000045970 Ccdc136Q3TVA9 1136 aa24.51■■□□□ 1.51
Gpc1-201ENSMUST00000045970 Zeb1Q64318 1117 aa24.41■■□□□ 1.5
Gpc1-201ENSMUST00000045970 Acin1Q9JIX8 1338 aaKnown RBP24.41■■□□□ 1.5
Gpc1-201ENSMUST00000045970 Pcgf6Q99NA9 353 aa24.18■■□□□ 1.46
Gpc1-201ENSMUST00000045970 ScribQ80U72 1612 aa24.17■■□□□ 1.46
Gpc1-201ENSMUST00000045970 Wdr66E9Q743 1299 aa24.16■■□□□ 1.46
Gpc1-201ENSMUST00000045970 Cngb1E1AZ71 1325 aa24.07■■□□□ 1.44
Gpc1-201ENSMUST00000045970 Kdm5dQ62240 1548 aa23.88■■□□□ 1.41
Gpc1-201ENSMUST00000045970 Zcchc6Q5BLK4 1491 aaKnown RBP23.88■■□□□ 1.41
Gpc1-201ENSMUST00000045970 NacadQ5SWP3 1504 aa23.74■■□□□ 1.39
Gpc1-201ENSMUST00000045970 Rb1cc1Q9ESK9 1588 aa23.73■■□□□ 1.39
Gpc1-201ENSMUST00000045970 Gab3Q8BSM5 595 aa23.71■■□□□ 1.39
Gpc1-201ENSMUST00000045970 CenpbP27790 599 aa23.68■■□□□ 1.38
Gpc1-201ENSMUST00000045970 Trim41Q5NCC3 630 aa23.66■■□□□ 1.38
Gpc1-201ENSMUST00000045970 Supt5hO55201 1082 aaKnown RBP23.62■■□□□ 1.37
Gpc1-201ENSMUST00000045970 Esf1Q3V1V3 845 aaKnown RBP23.57■■□□□ 1.36
Gpc1-201ENSMUST00000045970 NefmP08553 848 aa23.3■■□□□ 1.32
Gpc1-201ENSMUST00000045970 Pelp1Q9DBD5 1123 aaKnown RBP23.25■■□□□ 1.31
Gpc1-201ENSMUST00000045970 Dcaf1Q80TR8 1506 aa23.21■■□□□ 1.31
Gpc1-201ENSMUST00000045970 Baz1aO88379 1555 aa23.2■■□□□ 1.3
Gpc1-201ENSMUST00000045970 Ppargc1bQ8VHJ7 1014 aa23.18■■□□□ 1.3
Gpc1-201ENSMUST00000045970 Cdk11bP24788 784 aaKnown RBP23.17■■□□□ 1.3
Gpc1-201ENSMUST00000045970 Neurod1Q60867 357 aa23.17■■□□□ 1.3
Gpc1-201ENSMUST00000045970 Sycp2Q9CUU3 1500 aa23.17■■□□□ 1.3
Gpc1-201ENSMUST00000045970 Ccdc180J3QNE4 1664 aa23.11■■□□□ 1.29
Gpc1-201ENSMUST00000045970 Myt1Q8CFC2 1127 aa23.08■■□□□ 1.29
Gpc1-201ENSMUST00000045970 UbtfP25976 765 aaKnown RBP23.08■■□□□ 1.28
Gpc1-201ENSMUST00000045970 HrcG5E8J6 738 aa23.07■■□□□ 1.28
Gpc1-201ENSMUST00000045970 Nop58Q6DFW4 536 aaKnown RBP23■■□□□ 1.27
Gpc1-201ENSMUST00000045970 Amer1Q7TS75 1132 aa22.97■■□□□ 1.27
Gpc1-201ENSMUST00000045970 Myt1lP97500 1187 aa22.93■■□□□ 1.26
Gpc1-201ENSMUST00000045970 Ttbk1Q6PCN3 1308 aa22.87■■□□□ 1.25
Gpc1-201ENSMUST00000045970 Il27Q8K3I6 234 aa22.85■■□□□ 1.25
Gpc1-201ENSMUST00000045970 Rtl1Q7M732 1744 aa22.85■■□□□ 1.25
Gpc1-201ENSMUST00000045970 DiexfQ8BTT6 772 aaKnown RBP22.85■■□□□ 1.25
Gpc1-201ENSMUST00000045970 Gm38655A0A286YDK6 273 aa22.81■■□□□ 1.24
Gpc1-201ENSMUST00000045970 Cecr2E9Q2Z1 1453 aa22.79■■□□□ 1.24
Gpc1-201ENSMUST00000045970 Csrnp3P59055 597 aa22.78■■□□□ 1.24
Gpc1-201ENSMUST00000045970 Slc24a1Q91WD8 1130 aa22.78■■□□□ 1.24
Gpc1-201ENSMUST00000045970 Ube2uB1AUC4 352 aa22.74■■□□□ 1.23
Gpc1-201ENSMUST00000045970 BicraF8VPZ9 1578 aa22.66■■□□□ 1.22
Gpc1-201ENSMUST00000045970 Npm2Q80W85 207 aa22.66■■□□□ 1.22
Gpc1-201ENSMUST00000045970 Sall2Q9QX96 1004 aa22.61■■□□□ 1.21
Gpc1-201ENSMUST00000045970 Mier1Q5UAK0 511 aa22.6■■□□□ 1.21
Gpc1-201ENSMUST00000045970 Chic1Q8CBW7 227 aa22.52■■□□□ 1.2
Gpc1-201ENSMUST00000045970 Brd4Q9ESU6 1400 aaKnown RBP22.51■■□□□ 1.19
Gpc1-201ENSMUST00000045970 Anks4bQ8K3X6 423 aa22.49■■□□□ 1.19
Gpc1-201ENSMUST00000045970 Stra8P70278 393 aa22.47■■□□□ 1.19
Gpc1-201ENSMUST00000045970 1700123L14RikQ3V2K7 440 aa22.46■■□□□ 1.19
Gpc1-201ENSMUST00000045970 Smarca2Q6DIC0 1577 aa22.45■■□□□ 1.18
Gpc1-201ENSMUST00000045970 Tnnt3Q9QZ47 272 aa22.42■■□□□ 1.18
Gpc1-201ENSMUST00000045970 Crybg2B7ZCC2 1516 aa22.41■■□□□ 1.18
Gpc1-201ENSMUST00000045970 Ubl4bQ9CQ84 188 aa22.35■■□□□ 1.17
Gpc1-201ENSMUST00000045970 Dnajc5bQ9CQ94 199 aa22.31■■□□□ 1.16
Gpc1-201ENSMUST00000045970 Aplp2Q06335 707 aa22.28■■□□□ 1.16
Gpc1-201ENSMUST00000045970 TonslQ6NZL6 1363 aa22.25■■□□□ 1.15
Gpc1-201ENSMUST00000045970 Pds5bQ4VA53 1446 aaKnown RBP22.23■■□□□ 1.15
Gpc1-201ENSMUST00000045970 Eif5bQ05D44 1216 aaKnown RBP22.22■■□□□ 1.15
Gpc1-201ENSMUST00000045970 ClspnQ80YR7 1315 aa22.22■■□□□ 1.15
Gpc1-201ENSMUST00000045970 4933416C03RikQ3V063 378 aa22.21■■□□□ 1.15
Gpc1-201ENSMUST00000045970 Synj1Q8CHC4 1574 aa22.19■■□□□ 1.14
Gpc1-201ENSMUST00000045970 CftrP26361 1476 aa22.16■■□□□ 1.14
Gpc1-201ENSMUST00000045970 NclP09405 707 aaKnown RBP22.1■■□□□ 1.13
Gpc1-201ENSMUST00000045970 Npm1Q61937 292 aaKnown RBP22.09■■□□□ 1.13
Gpc1-201ENSMUST00000045970 Atad2bE9Q166 1460 aaKnown RBP22.08■■□□□ 1.13
Gpc1-201ENSMUST00000045970 Mapk8ip2Q9ERE9 830 aa22.08■■□□□ 1.13
Gpc1-201ENSMUST00000045970 Smarca4Q3TKT4 1613 aaKnown RBP22.08■■□□□ 1.12
Gpc1-201ENSMUST00000045970 Ercc6F8VPZ5 1481 aa22.04■■□□□ 1.12
Gpc1-201ENSMUST00000045970 Anp32aO35381 247 aa22.01■■□□□ 1.11
Gpc1-201ENSMUST00000045970 Kif15Q6P9L6 1387 aa21.99■■□□□ 1.11
Gpc1-201ENSMUST00000045970 Golga3P55937 1487 aa21.99■■□□□ 1.11
Gpc1-201ENSMUST00000045970 Iqgap2Q3UQ44 1575 aa21.98■■□□□ 1.11
Gpc1-201ENSMUST00000045970 Rsf1E9PWW9 1441 aaKnown RBP21.97■■□□□ 1.11
Gpc1-201ENSMUST00000045970 Rtl5Q5DTT4 599 aa21.96■■□□□ 1.11
Gpc1-201ENSMUST00000045970 Ccdc88bQ4QRL3 1481 aa21.96■■□□□ 1.11
Gpc1-201ENSMUST00000045970 Fam50aQ9WV03 339 aaKnown RBP21.93■■□□□ 1.1
Gpc1-201ENSMUST00000045970 Ap3b1Q9Z1T1 1105 aa21.92■■□□□ 1.1
Gpc1-201ENSMUST00000045970 NrdcQ8BHG1 1161 aa21.88■■□□□ 1.09
Gpc1-201ENSMUST00000045970 Fam71e1A1L3C1 212 aa21.86■■□□□ 1.09
Gpc1-201ENSMUST00000045970 Aebp2Q9Z248 504 aaKnown RBP21.84■■□□□ 1.09
Gpc1-201ENSMUST00000045970 Eid3Q3V124 375 aa21.83■■□□□ 1.08
Gpc1-201ENSMUST00000045970 Bcl11aQ9QYE3 773 aa21.8■■□□□ 1.08
Gpc1-201ENSMUST00000045970 Plekhg3Q4VAC9 1341 aa21.75■■□□□ 1.07
Gpc1-201ENSMUST00000045970 Frmpd1A2AKB4 1549 aa21.72■■□□□ 1.07
Gpc1-201ENSMUST00000045970 Cttnbp2B9EJA2 1648 aa21.72■■□□□ 1.07
Gpc1-201ENSMUST00000045970 DaxxO35613 739 aa21.7■■□□□ 1.06
Gpc1-201ENSMUST00000045970 Cep164Q5DU05 1446 aa21.67■■□□□ 1.06
Gpc1-201ENSMUST00000045970 Phldb1Q6PDH0 1371 aaKnown RBP21.65■■□□□ 1.06
Gpc1-201ENSMUST00000045970 Cux2P70298 1426 aa21.59■■□□□ 1.05
Gpc1-201ENSMUST00000045970 SafbD3YXK2 937 aaKnown RBP21.58■■□□□ 1.05
Gpc1-201ENSMUST00000045970 NeflP08551 543 aa21.58■■□□□ 1.05
Gpc1-201ENSMUST00000045970 Calr4Q3TQS0 420 aa21.57■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms