RNA–Protein interactions for RNA: ENSMUST00000034511.6

Trim29-201, Transcript of Tripartite motif-containing protein 29, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim29, Length 2,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29-201ENSMUST00000034511 NischQ80TM9 1593 aa25■■□□□ 1.59
Trim29-201ENSMUST00000034511 Gm35339A0A140LHH9 1649 aa24.47■■□□□ 1.51
Trim29-201ENSMUST00000034511 Abcc9P70170 1546 aa24.19■■□□□ 1.46
Trim29-201ENSMUST00000034511 Abcc8B2RUS7 1588 aa23.77■■□□□ 1.4
Trim29-201ENSMUST00000034511 Rhox8Q6VSS7 320 aa23.25■■□□□ 1.31
Trim29-201ENSMUST00000034511 ScribQ80U72 1612 aa22.24■■□□□ 1.15
Trim29-201ENSMUST00000034511 Rtl1Q7M732 1744 aa22.22■■□□□ 1.15
Trim29-201ENSMUST00000034511 Dcaf1Q80TR8 1506 aa22.02■■□□□ 1.12
Trim29-201ENSMUST00000034511 Rb1cc1Q9ESK9 1588 aa21.88■■□□□ 1.09
Trim29-201ENSMUST00000034511 Ccdc180J3QNE4 1664 aa21.87■■□□□ 1.09
Trim29-201ENSMUST00000034511 Kdm5dQ62240 1548 aa21.83■■□□□ 1.09
Trim29-201ENSMUST00000034511 NacadQ5SWP3 1504 aa21.68■■□□□ 1.06
Trim29-201ENSMUST00000034511 Zcchc6Q5BLK4 1491 aaKnown RBP21.61■■□□□ 1.05
Trim29-201ENSMUST00000034511 Ccdc136Q3TVA9 1136 aa21.61■■□□□ 1.05
Trim29-201ENSMUST00000034511 Baz1aO88379 1555 aa21.58■■□□□ 1.05
Trim29-201ENSMUST00000034511 Rpgrip1Q9EPQ2 1331 aa21.27■■□□□ 1
Trim29-201ENSMUST00000034511 Sycp2Q9CUU3 1500 aa21.21■□□□□ 0.99
Trim29-201ENSMUST00000034511 Crybg2B7ZCC2 1516 aa21.17■□□□□ 0.98
Trim29-201ENSMUST00000034511 Smarca2Q6DIC0 1577 aa21.06■□□□□ 0.96
Trim29-201ENSMUST00000034511 Trim41Q5NCC3 630 aa21.05■□□□□ 0.96
Trim29-201ENSMUST00000034511 HrcG5E8J6 738 aa21.04■□□□□ 0.96
Trim29-201ENSMUST00000034511 BicraF8VPZ9 1578 aa20.76■□□□□ 0.91
Trim29-201ENSMUST00000034511 Cecr2E9Q2Z1 1453 aa20.75■□□□□ 0.91
Trim29-201ENSMUST00000034511 Cngb1E1AZ71 1325 aa20.66■□□□□ 0.9
Trim29-201ENSMUST00000034511 Brd4Q9ESU6 1400 aaKnown RBP20.65■□□□□ 0.9
Trim29-201ENSMUST00000034511 Ehmt2Q9Z148 1263 aaKnown RBP20.58■□□□□ 0.89
Trim29-201ENSMUST00000034511 Acin1Q9JIX8 1338 aaKnown RBP20.58■□□□□ 0.89
Trim29-201ENSMUST00000034511 Esf1Q3V1V3 845 aaKnown RBP20.49■□□□□ 0.87
Trim29-201ENSMUST00000034511 Synj1Q8CHC4 1574 aa20.47■□□□□ 0.87
Trim29-201ENSMUST00000034511 Cep164Q5DU05 1446 aa20.44■□□□□ 0.86
Trim29-201ENSMUST00000034511 Chic1Q8CBW7 227 aa20.44■□□□□ 0.86
Trim29-201ENSMUST00000034511 CftrP26361 1476 aa20.38■□□□□ 0.85
Trim29-201ENSMUST00000034511 Golga3P55937 1487 aa20.35■□□□□ 0.85
Trim29-201ENSMUST00000034511 Rsf1E9PWW9 1441 aaKnown RBP20.35■□□□□ 0.85
Trim29-201ENSMUST00000034511 Gab3Q8BSM5 595 aa20.34■□□□□ 0.85
Trim29-201ENSMUST00000034511 Ccdc88bQ4QRL3 1481 aa20.26■□□□□ 0.83
Trim29-201ENSMUST00000034511 Smarca4Q3TKT4 1613 aaKnown RBP20.24■□□□□ 0.83
Trim29-201ENSMUST00000034511 Cttnbp2B9EJA2 1648 aa20.19■□□□□ 0.82
Trim29-201ENSMUST00000034511 Top2bQ64511 1612 aa20.03■□□□□ 0.8
Trim29-201ENSMUST00000034511 Iqgap2Q3UQ44 1575 aa20.02■□□□□ 0.8
Trim29-201ENSMUST00000034511 Pcgf6Q99NA9 353 aa20.01■□□□□ 0.79
Trim29-201ENSMUST00000034511 Atad2bE9Q166 1460 aaKnown RBP19.98■□□□□ 0.79
Trim29-201ENSMUST00000034511 Pds5bQ4VA53 1446 aaKnown RBP19.93■□□□□ 0.78
Trim29-201ENSMUST00000034511 Cc2d2aQ8CFW7 1633 aa19.92■□□□□ 0.78
Trim29-201ENSMUST00000034511 Fmn1Q05860 1466 aa19.83■□□□□ 0.76
Trim29-201ENSMUST00000034511 Frmpd1A2AKB4 1549 aa19.69■□□□□ 0.74
Trim29-201ENSMUST00000034511 Myt1lP97500 1187 aa19.68■□□□□ 0.74
Trim29-201ENSMUST00000034511 Top2aQ01320 1528 aaKnown RBP19.67■□□□□ 0.74
Trim29-201ENSMUST00000034511 Npm2Q80W85 207 aa19.66■□□□□ 0.74
Trim29-201ENSMUST00000034511 Rapgef2Q8CHG7 1496 aa19.62■□□□□ 0.73
Trim29-201ENSMUST00000034511 Wdr62Q3U3T8 1523 aa19.61■□□□□ 0.73
Trim29-201ENSMUST00000034511 Il27Q8K3I6 234 aa19.6■□□□□ 0.73
Trim29-201ENSMUST00000034511 Ercc6F8VPZ5 1481 aa19.59■□□□□ 0.73
Trim29-201ENSMUST00000034511 Cep162Q6ZQ06 1403 aa19.53■□□□□ 0.72
Trim29-201ENSMUST00000034511 Kif15Q6P9L6 1387 aa19.52■□□□□ 0.72
Trim29-201ENSMUST00000034511 Supt5hO55201 1082 aaKnown RBP19.46■□□□□ 0.71
Trim29-201ENSMUST00000034511 TnnQ80Z71 1560 aa19.46■□□□□ 0.71
Trim29-201ENSMUST00000034511 Mier1Q5UAK0 511 aa19.45■□□□□ 0.7
Trim29-201ENSMUST00000034511 UbtfP25976 765 aaKnown RBP19.43■□□□□ 0.7
Trim29-201ENSMUST00000034511 Lamc3Q9R0B6 1581 aa19.4■□□□□ 0.7
Trim29-201ENSMUST00000034511 Ubl4bQ9CQ84 188 aa19.35■□□□□ 0.69
Trim29-201ENSMUST00000034511 Unc13aQ4KUS2 1712 aa19.35■□□□□ 0.69
Trim29-201ENSMUST00000034511 PtprkP35822 1457 aa19.33■□□□□ 0.68
Trim29-201ENSMUST00000034511 Phldb1Q6PDH0 1371 aaKnown RBP19.32■□□□□ 0.68
Trim29-201ENSMUST00000034511 Zeb1Q64318 1117 aa19.29■□□□□ 0.68
Trim29-201ENSMUST00000034511 Clip1Q922J3 1391 aa19.29■□□□□ 0.68
Trim29-201ENSMUST00000034511 Ccdc18Q640L5 1455 aa19.25■□□□□ 0.67
Trim29-201ENSMUST00000034511 Camsap1A2AHC3 1581 aa19.25■□□□□ 0.67
Trim29-201ENSMUST00000034511 Neurod1Q60867 357 aa19.24■□□□□ 0.67
Trim29-201ENSMUST00000034511 NefmP08553 848 aa19.24■□□□□ 0.67
Trim29-201ENSMUST00000034511 Plekhg3Q4VAC9 1341 aa19.23■□□□□ 0.67
Trim29-201ENSMUST00000034511 Arhgap35Q91YM2 1499 aa19.23■□□□□ 0.67
Trim29-201ENSMUST00000034511 Npm1Q61937 292 aaKnown RBP19.23■□□□□ 0.67
Trim29-201ENSMUST00000034511 Thoc2B1AZI6 1594 aaKnown RBP19.22■□□□□ 0.67
Trim29-201ENSMUST00000034511 Eif4g1Q6NZJ6 1600 aaKnown RBP19.21■□□□□ 0.67
Trim29-201ENSMUST00000034511 Cux2P70298 1426 aa19.21■□□□□ 0.67
Trim29-201ENSMUST00000034511 NrkQ9R0G8 1455 aa19.19■□□□□ 0.66
Trim29-201ENSMUST00000034511 Ap3b1Q9Z1T1 1105 aa19.17■□□□□ 0.66
Trim29-201ENSMUST00000034511 Shroom4Q1W617 1475 aa19.17■□□□□ 0.66
Trim29-201ENSMUST00000034511 Grin2bQ01097 1482 aa19.14■□□□□ 0.65
Trim29-201ENSMUST00000034511 Las1lA2BE28 776 aaKnown RBP19.14■□□□□ 0.65
Trim29-201ENSMUST00000034511 Eea1Q8BL66 1411 aa19.07■□□□□ 0.64
Trim29-201ENSMUST00000034511 Setd5Q5XJV7 1441 aa19.06■□□□□ 0.64
Trim29-201ENSMUST00000034511 Baz1bQ9Z277 1479 aa19.04■□□□□ 0.64
Trim29-201ENSMUST00000034511 LrpprcQ6PB66 1392 aaKnown RBP19.02■□□□□ 0.64
Trim29-201ENSMUST00000034511 Fam135aQ6NS59 1506 aa19.02■□□□□ 0.63
Trim29-201ENSMUST00000034511 Mroh2bQ7M6Y6 1581 aa19■□□□□ 0.63
Trim29-201ENSMUST00000034511 Map3k1P53349 1493 aa18.99■□□□□ 0.63
Trim29-201ENSMUST00000034511 Arap1Q4LDD4 1452 aa18.99■□□□□ 0.63
Trim29-201ENSMUST00000034511 Efcab5A0JP43 1406 aa18.95■□□□□ 0.62
Trim29-201ENSMUST00000034511 Duox2A2AQ99 1517 aa18.93■□□□□ 0.62
Trim29-201ENSMUST00000034511 PogzQ8BZH4 1409 aaKnown RBP18.93■□□□□ 0.62
Trim29-201ENSMUST00000034511 Dnajc5bQ9CQ94 199 aa18.92■□□□□ 0.62
Trim29-201ENSMUST00000034511 Dhx29Q6PGC1 1365 aaKnown RBP18.88■□□□□ 0.61
Trim29-201ENSMUST00000034511 Arhgef5E9Q7D5 1581 aa18.87■□□□□ 0.61
Trim29-201ENSMUST00000034511 Anks4bQ8K3X6 423 aa18.84■□□□□ 0.61
Trim29-201ENSMUST00000034511 BlmO88700 1416 aa18.83■□□□□ 0.6
Trim29-201ENSMUST00000034511 Carmil1Q6EDY6 1374 aa18.83■□□□□ 0.6
Trim29-201ENSMUST00000034511 Lmod2Q3UHZ5 550 aa18.82■□□□□ 0.6
Trim29-201ENSMUST00000034511 Sall2Q9QX96 1004 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms