RNA–Protein interactions for RNA: ENSMUST00000029912.10

Sdcbp-201, Transcript of Syntenin-1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Sdcbp, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdcbp-201ENSMUST00000029912 NischQ80TM9 1593 aa35.04■■■■□ 3.2
Sdcbp-201ENSMUST00000029912 Gm35339A0A140LHH9 1649 aa34.15■■■■□ 3.06
Sdcbp-201ENSMUST00000029912 Abcc9P70170 1546 aa33.92■■■■□ 3.02
Sdcbp-201ENSMUST00000029912 Abcc8B2RUS7 1588 aa33.23■■■□□ 2.91
Sdcbp-201ENSMUST00000029912 Rhox8Q6VSS7 320 aa32.91■■■□□ 2.86
Sdcbp-201ENSMUST00000029912 Rtl1Q7M732 1744 aa31.6■■■□□ 2.65
Sdcbp-201ENSMUST00000029912 Ccdc180J3QNE4 1664 aa31.17■■■□□ 2.58
Sdcbp-201ENSMUST00000029912 ScribQ80U72 1612 aa31.07■■■□□ 2.56
Sdcbp-201ENSMUST00000029912 Zcchc6Q5BLK4 1491 aaKnown RBP30.78■■■□□ 2.52
Sdcbp-201ENSMUST00000029912 Rb1cc1Q9ESK9 1588 aa30.73■■■□□ 2.51
Sdcbp-201ENSMUST00000029912 Dcaf1Q80TR8 1506 aa30.7■■■□□ 2.5
Sdcbp-201ENSMUST00000029912 Ccdc136Q3TVA9 1136 aa30.59■■■□□ 2.49
Sdcbp-201ENSMUST00000029912 Kdm5dQ62240 1548 aa30.5■■■□□ 2.47
Sdcbp-201ENSMUST00000029912 Baz1aO88379 1555 aa30.26■■■□□ 2.43
Sdcbp-201ENSMUST00000029912 NacadQ5SWP3 1504 aa30.14■■■□□ 2.42
Sdcbp-201ENSMUST00000029912 Ehmt2Q9Z148 1263 aaKnown RBP29.84■■■□□ 2.37
Sdcbp-201ENSMUST00000029912 HrcG5E8J6 738 aa29.81■■■□□ 2.36
Sdcbp-201ENSMUST00000029912 Trim41Q5NCC3 630 aa29.65■■■□□ 2.34
Sdcbp-201ENSMUST00000029912 Smarca2Q6DIC0 1577 aa29.57■■■□□ 2.32
Sdcbp-201ENSMUST00000029912 Sycp2Q9CUU3 1500 aa29.51■■■□□ 2.31
Sdcbp-201ENSMUST00000029912 Crybg2B7ZCC2 1516 aa29.46■■■□□ 2.31
Sdcbp-201ENSMUST00000029912 Rpgrip1Q9EPQ2 1331 aa29.28■■■□□ 2.28
Sdcbp-201ENSMUST00000029912 Acin1Q9JIX8 1338 aaKnown RBP29.22■■■□□ 2.27
Sdcbp-201ENSMUST00000029912 Cngb1E1AZ71 1325 aa29.21■■■□□ 2.27
Sdcbp-201ENSMUST00000029912 Cecr2E9Q2Z1 1453 aa29.13■■■□□ 2.25
Sdcbp-201ENSMUST00000029912 Cep164Q5DU05 1446 aa29.01■■■□□ 2.23
Sdcbp-201ENSMUST00000029912 Chic1Q8CBW7 227 aa28.99■■■□□ 2.23
Sdcbp-201ENSMUST00000029912 Gab3Q8BSM5 595 aa28.94■■■□□ 2.22
Sdcbp-201ENSMUST00000029912 BicraF8VPZ9 1578 aa28.94■■■□□ 2.22
Sdcbp-201ENSMUST00000029912 Brd4Q9ESU6 1400 aaKnown RBP28.92■■■□□ 2.22
Sdcbp-201ENSMUST00000029912 Rsf1E9PWW9 1441 aaKnown RBP28.87■■■□□ 2.21
Sdcbp-201ENSMUST00000029912 Synj1Q8CHC4 1574 aa28.79■■■□□ 2.2
Sdcbp-201ENSMUST00000029912 Esf1Q3V1V3 845 aaKnown RBP28.75■■■□□ 2.19
Sdcbp-201ENSMUST00000029912 Ccdc88bQ4QRL3 1481 aa28.71■■■□□ 2.19
Sdcbp-201ENSMUST00000029912 Golga3P55937 1487 aa28.65■■■□□ 2.18
Sdcbp-201ENSMUST00000029912 CftrP26361 1476 aa28.55■■■□□ 2.16
Sdcbp-201ENSMUST00000029912 Cttnbp2B9EJA2 1648 aa28.29■■■□□ 2.12
Sdcbp-201ENSMUST00000029912 Smarca4Q3TKT4 1613 aaKnown RBP28.25■■■□□ 2.11
Sdcbp-201ENSMUST00000029912 Top2bQ64511 1612 aa28.22■■■□□ 2.11
Sdcbp-201ENSMUST00000029912 Cc2d2aQ8CFW7 1633 aa28.17■■■□□ 2.1
Sdcbp-201ENSMUST00000029912 Pcgf6Q99NA9 353 aa28.07■■■□□ 2.08
Sdcbp-201ENSMUST00000029912 Iqgap2Q3UQ44 1575 aa27.93■■■□□ 2.06
Sdcbp-201ENSMUST00000029912 Mier1Q5UAK0 511 aa27.89■■■□□ 2.06
Sdcbp-201ENSMUST00000029912 Myt1lP97500 1187 aa27.89■■■□□ 2.05
Sdcbp-201ENSMUST00000029912 Fmn1Q05860 1466 aa27.83■■■□□ 2.05
Sdcbp-201ENSMUST00000029912 Supt5hO55201 1082 aaKnown RBP27.82■■■□□ 2.04
Sdcbp-201ENSMUST00000029912 Zeb1Q64318 1117 aa27.77■■■□□ 2.04
Sdcbp-201ENSMUST00000029912 UbtfP25976 765 aaKnown RBP27.74■■■□□ 2.03
Sdcbp-201ENSMUST00000029912 Rapgef2Q8CHG7 1496 aa27.73■■■□□ 2.03
Sdcbp-201ENSMUST00000029912 Top2aQ01320 1528 aaKnown RBP27.72■■■□□ 2.03
Sdcbp-201ENSMUST00000029912 Npm2Q80W85 207 aa27.72■■■□□ 2.03
Sdcbp-201ENSMUST00000029912 Atad2bE9Q166 1460 aaKnown RBP27.71■■■□□ 2.03
Sdcbp-201ENSMUST00000029912 Cep162Q6ZQ06 1403 aa27.59■■■□□ 2.01
Sdcbp-201ENSMUST00000029912 Pds5bQ4VA53 1446 aaKnown RBP27.56■■■□□ 2
Sdcbp-201ENSMUST00000029912 Il27Q8K3I6 234 aa27.52■■■□□ 2
Sdcbp-201ENSMUST00000029912 NefmP08553 848 aa27.52■■■□□ 2
Sdcbp-201ENSMUST00000029912 Frmpd1A2AKB4 1549 aa27.42■■□□□ 1.98
Sdcbp-201ENSMUST00000029912 Plekhg3Q4VAC9 1341 aa27.37■■□□□ 1.97
Sdcbp-201ENSMUST00000029912 Wdr62Q3U3T8 1523 aa27.31■■□□□ 1.96
Sdcbp-201ENSMUST00000029912 TnnQ80Z71 1560 aa27.29■■□□□ 1.96
Sdcbp-201ENSMUST00000029912 Clip1Q922J3 1391 aa27.29■■□□□ 1.96
Sdcbp-201ENSMUST00000029912 Kif15Q6P9L6 1387 aa27.27■■□□□ 1.96
Sdcbp-201ENSMUST00000029912 PtprkP35822 1457 aa27.26■■□□□ 1.95
Sdcbp-201ENSMUST00000029912 Ap3b1Q9Z1T1 1105 aa27.21■■□□□ 1.95
Sdcbp-201ENSMUST00000029912 Sall2Q9QX96 1004 aa27.17■■□□□ 1.94
Sdcbp-201ENSMUST00000029912 Ercc6F8VPZ5 1481 aa27.17■■□□□ 1.94
Sdcbp-201ENSMUST00000029912 Eif4g1Q6NZJ6 1600 aaKnown RBP27.17■■□□□ 1.94
Sdcbp-201ENSMUST00000029912 Arhgap35Q91YM2 1499 aa27.13■■□□□ 1.93
Sdcbp-201ENSMUST00000029912 Lamc3Q9R0B6 1581 aa27.1■■□□□ 1.93
Sdcbp-201ENSMUST00000029912 Unc13aQ4KUS2 1712 aa27.08■■□□□ 1.92
Sdcbp-201ENSMUST00000029912 Wdr66E9Q743 1299 aa27.03■■□□□ 1.92
Sdcbp-201ENSMUST00000029912 Aebp2Q9Z248 504 aaKnown RBP26.99■■□□□ 1.91
Sdcbp-201ENSMUST00000029912 Ppargc1bQ8VHJ7 1014 aa26.98■■□□□ 1.91
Sdcbp-201ENSMUST00000029912 Camsap1A2AHC3 1581 aa26.98■■□□□ 1.91
Sdcbp-201ENSMUST00000029912 Las1lA2BE28 776 aaKnown RBP26.97■■□□□ 1.91
Sdcbp-201ENSMUST00000029912 NrkQ9R0G8 1455 aa26.97■■□□□ 1.91
Sdcbp-201ENSMUST00000029912 Shroom4Q1W617 1475 aa26.92■■□□□ 1.9
Sdcbp-201ENSMUST00000029912 Arap1Q4LDD4 1452 aa26.92■■□□□ 1.9
Sdcbp-201ENSMUST00000029912 Neurod1Q60867 357 aa26.91■■□□□ 1.9
Sdcbp-201ENSMUST00000029912 Eea1Q8BL66 1411 aa26.89■■□□□ 1.9
Sdcbp-201ENSMUST00000029912 Setd5Q5XJV7 1441 aa26.89■■□□□ 1.89
Sdcbp-201ENSMUST00000029912 Ccdc18Q640L5 1455 aa26.86■■□□□ 1.89
Sdcbp-201ENSMUST00000029912 Ubl4bQ9CQ84 188 aa26.83■■□□□ 1.89
Sdcbp-201ENSMUST00000029912 Grin2bQ01097 1482 aa26.82■■□□□ 1.88
Sdcbp-201ENSMUST00000029912 Ncapd3Q6ZQK0 1506 aa26.79■■□□□ 1.88
Sdcbp-201ENSMUST00000029912 Cux2P70298 1426 aa26.77■■□□□ 1.88
Sdcbp-201ENSMUST00000029912 TonslQ6NZL6 1363 aa26.77■■□□□ 1.88
Sdcbp-201ENSMUST00000029912 Baz1bQ9Z277 1479 aa26.77■■□□□ 1.88
Sdcbp-201ENSMUST00000029912 Npm1Q61937 292 aaKnown RBP26.75■■□□□ 1.87
Sdcbp-201ENSMUST00000029912 Phldb1Q6PDH0 1371 aaKnown RBP26.73■■□□□ 1.87
Sdcbp-201ENSMUST00000029912 Arhgef5E9Q7D5 1581 aa26.71■■□□□ 1.87
Sdcbp-201ENSMUST00000029912 Eid3Q3V124 375 aa26.7■■□□□ 1.87
Sdcbp-201ENSMUST00000029912 Mroh2bQ7M6Y6 1581 aa26.68■■□□□ 1.86
Sdcbp-201ENSMUST00000029912 Map3k1P53349 1493 aa26.67■■□□□ 1.86
Sdcbp-201ENSMUST00000029912 Lmod2Q3UHZ5 550 aa26.65■■□□□ 1.86
Sdcbp-201ENSMUST00000029912 AqrQ8CFQ3 1481 aaKnown RBP26.62■■□□□ 1.85
Sdcbp-201ENSMUST00000029912 Thoc2B1AZI6 1594 aaKnown RBP26.61■■□□□ 1.85
Sdcbp-201ENSMUST00000029912 BlmO88700 1416 aa26.6■■□□□ 1.85
Sdcbp-201ENSMUST00000029912 Ankrd26Q811D2 1581 aa26.56■■□□□ 1.84
Sdcbp-201ENSMUST00000029912 ClspnQ80YR7 1315 aa26.55■■□□□ 1.84
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms