RNA–Protein interactions for RNA: ENSMUST00000028515.3

Chrna1-201, Transcript of Acetylcholine receptor subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chrna1, Length 4,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1-201ENSMUST00000028515 NischQ80TM9 1593 aa15.45■□□□□ 0.06
Chrna1-201ENSMUST00000028515 Rhox8Q6VSS7 320 aa15.31■□□□□ 0.04
Chrna1-201ENSMUST00000028515 Abcc9P70170 1546 aa14.74□□□□□ -0.05
Chrna1-201ENSMUST00000028515 Gm35339A0A140LHH9 1649 aa14.57□□□□□ -0.08
Chrna1-201ENSMUST00000028515 Abcc8B2RUS7 1588 aa14.53□□□□□ -0.08
Chrna1-201ENSMUST00000028515 Ccdc136Q3TVA9 1136 aa14.07□□□□□ -0.16
Chrna1-201ENSMUST00000028515 Zcchc6Q5BLK4 1491 aaKnown RBP13.62□□□□□ -0.23
Chrna1-201ENSMUST00000028515 Trim41Q5NCC3 630 aa13.6□□□□□ -0.23
Chrna1-201ENSMUST00000028515 Cngb1E1AZ71 1325 aa13.58□□□□□ -0.24
Chrna1-201ENSMUST00000028515 Esf1Q3V1V3 845 aaKnown RBP13.55□□□□□ -0.24
Chrna1-201ENSMUST00000028515 Rtl1Q7M732 1744 aa13.54□□□□□ -0.24
Chrna1-201ENSMUST00000028515 Rb1cc1Q9ESK9 1588 aa13.53□□□□□ -0.24
Chrna1-201ENSMUST00000028515 Ehmt2Q9Z148 1263 aaKnown RBP13.49□□□□□ -0.25
Chrna1-201ENSMUST00000028515 Ccdc180J3QNE4 1664 aa13.49□□□□□ -0.25
Chrna1-201ENSMUST00000028515 ScribQ80U72 1612 aa13.45□□□□□ -0.26
Chrna1-201ENSMUST00000028515 NacadQ5SWP3 1504 aa13.44□□□□□ -0.26
Chrna1-201ENSMUST00000028515 Kdm5dQ62240 1548 aa13.44□□□□□ -0.26
Chrna1-201ENSMUST00000028515 Gab3Q8BSM5 595 aa13.37□□□□□ -0.27
Chrna1-201ENSMUST00000028515 Dcaf1Q80TR8 1506 aa13.33□□□□□ -0.28
Chrna1-201ENSMUST00000028515 Baz1aO88379 1555 aa13.28□□□□□ -0.28
Chrna1-201ENSMUST00000028515 HrcG5E8J6 738 aa13.22□□□□□ -0.29
Chrna1-201ENSMUST00000028515 Sycp2Q9CUU3 1500 aa13.05□□□□□ -0.32
Chrna1-201ENSMUST00000028515 Npm2Q80W85 207 aa13.02□□□□□ -0.32
Chrna1-201ENSMUST00000028515 Myt1lP97500 1187 aa13.02□□□□□ -0.33
Chrna1-201ENSMUST00000028515 Brd4Q9ESU6 1400 aaKnown RBP13□□□□□ -0.33
Chrna1-201ENSMUST00000028515 Il27Q8K3I6 234 aa12.98□□□□□ -0.33
Chrna1-201ENSMUST00000028515 Chic1Q8CBW7 227 aa12.94□□□□□ -0.34
Chrna1-201ENSMUST00000028515 Zeb1Q64318 1117 aa12.93□□□□□ -0.34
Chrna1-201ENSMUST00000028515 Rpgrip1Q9EPQ2 1331 aa12.89□□□□□ -0.35
Chrna1-201ENSMUST00000028515 Crybg2B7ZCC2 1516 aa12.86□□□□□ -0.35
Chrna1-201ENSMUST00000028515 Cecr2E9Q2Z1 1453 aa12.84□□□□□ -0.35
Chrna1-201ENSMUST00000028515 Smarca2Q6DIC0 1577 aa12.82□□□□□ -0.36
Chrna1-201ENSMUST00000028515 Cep164Q5DU05 1446 aa12.74□□□□□ -0.37
Chrna1-201ENSMUST00000028515 Acin1Q9JIX8 1338 aaKnown RBP12.74□□□□□ -0.37
Chrna1-201ENSMUST00000028515 Golga3P55937 1487 aa12.71□□□□□ -0.37
Chrna1-201ENSMUST00000028515 UbtfP25976 765 aaKnown RBP12.71□□□□□ -0.38
Chrna1-201ENSMUST00000028515 Rsf1E9PWW9 1441 aaKnown RBP12.66□□□□□ -0.38
Chrna1-201ENSMUST00000028515 CftrP26361 1476 aa12.62□□□□□ -0.39
Chrna1-201ENSMUST00000028515 Synj1Q8CHC4 1574 aa12.62□□□□□ -0.39
Chrna1-201ENSMUST00000028515 BicraF8VPZ9 1578 aa12.61□□□□□ -0.39
Chrna1-201ENSMUST00000028515 Ap3b1Q9Z1T1 1105 aa12.61□□□□□ -0.39
Chrna1-201ENSMUST00000028515 Ccdc88bQ4QRL3 1481 aa12.59□□□□□ -0.39
Chrna1-201ENSMUST00000028515 Npm1Q61937 292 aaKnown RBP12.59□□□□□ -0.39
Chrna1-201ENSMUST00000028515 Ubl4bQ9CQ84 188 aa12.58□□□□□ -0.39
Chrna1-201ENSMUST00000028515 Pds5bQ4VA53 1446 aaKnown RBP12.56□□□□□ -0.4
Chrna1-201ENSMUST00000028515 Smarca4Q3TKT4 1613 aaKnown RBP12.51□□□□□ -0.41
Chrna1-201ENSMUST00000028515 Kif15Q6P9L6 1387 aa12.49□□□□□ -0.41
Chrna1-201ENSMUST00000028515 Ercc6F8VPZ5 1481 aa12.49□□□□□ -0.41
Chrna1-201ENSMUST00000028515 Atad2bE9Q166 1460 aaKnown RBP12.47□□□□□ -0.41
Chrna1-201ENSMUST00000028515 Plekhg3Q4VAC9 1341 aa12.45□□□□□ -0.42
Chrna1-201ENSMUST00000028515 Ube2uB1AUC4 352 aa12.43□□□□□ -0.42
Chrna1-201ENSMUST00000028515 Mier1Q5UAK0 511 aa12.41□□□□□ -0.42
Chrna1-201ENSMUST00000028515 Wdr66E9Q743 1299 aa12.41□□□□□ -0.42
Chrna1-201ENSMUST00000028515 Cttnbp2B9EJA2 1648 aa12.41□□□□□ -0.42
Chrna1-201ENSMUST00000028515 Iqgap2Q3UQ44 1575 aa12.4□□□□□ -0.42
Chrna1-201ENSMUST00000028515 Las1lA2BE28 776 aaKnown RBP12.39□□□□□ -0.43
Chrna1-201ENSMUST00000028515 NefmP08553 848 aa12.36□□□□□ -0.43
Chrna1-201ENSMUST00000028515 Fmn1Q05860 1466 aa12.35□□□□□ -0.43
Chrna1-201ENSMUST00000028515 Lmod2Q3UHZ5 550 aa12.34□□□□□ -0.43
Chrna1-201ENSMUST00000028515 Clip1Q922J3 1391 aa12.34□□□□□ -0.43
Chrna1-201ENSMUST00000028515 Fam50aQ9WV03 339 aaKnown RBP12.29□□□□□ -0.44
Chrna1-201ENSMUST00000028515 Ccdc18Q640L5 1455 aa12.26□□□□□ -0.45
Chrna1-201ENSMUST00000028515 Cc2d2aQ8CFW7 1633 aa12.22□□□□□ -0.45
Chrna1-201ENSMUST00000028515 Phldb1Q6PDH0 1371 aaKnown RBP12.22□□□□□ -0.45
Chrna1-201ENSMUST00000028515 Cep162Q6ZQ06 1403 aa12.21□□□□□ -0.46
Chrna1-201ENSMUST00000028515 Cux2P70298 1426 aa12.2□□□□□ -0.46
Chrna1-201ENSMUST00000028515 Frmpd1A2AKB4 1549 aa12.19□□□□□ -0.46
Chrna1-201ENSMUST00000028515 Rapgef2Q8CHG7 1496 aa12.17□□□□□ -0.46
Chrna1-201ENSMUST00000028515 Setd5Q5XJV7 1441 aa12.17□□□□□ -0.46
Chrna1-201ENSMUST00000028515 Ppargc1bQ8VHJ7 1014 aa12.16□□□□□ -0.46
Chrna1-201ENSMUST00000028515 Pcgf6Q99NA9 353 aa12.15□□□□□ -0.46
Chrna1-201ENSMUST00000028515 Supt5hO55201 1082 aaKnown RBP12.13□□□□□ -0.47
Chrna1-201ENSMUST00000028515 Top2bQ64511 1612 aa12.11□□□□□ -0.47
Chrna1-201ENSMUST00000028515 Eid3Q3V124 375 aa12.09□□□□□ -0.47
Chrna1-201ENSMUST00000028515 BlmO88700 1416 aa12.09□□□□□ -0.47
Chrna1-201ENSMUST00000028515 Eea1Q8BL66 1411 aa12.08□□□□□ -0.48
Chrna1-201ENSMUST00000028515 Wdr62Q3U3T8 1523 aa12.08□□□□□ -0.48
Chrna1-201ENSMUST00000028515 Fkbp15Q6P9Q6 1216 aaKnown RBP12.08□□□□□ -0.48
Chrna1-201ENSMUST00000028515 Top2aQ01320 1528 aaKnown RBP12.06□□□□□ -0.48
Chrna1-201ENSMUST00000028515 TonslQ6NZL6 1363 aa12.06□□□□□ -0.48
Chrna1-201ENSMUST00000028515 Baz1bQ9Z277 1479 aa12.03□□□□□ -0.48
Chrna1-201ENSMUST00000028515 Dnajc5bQ9CQ94 199 aa12.02□□□□□ -0.48
Chrna1-201ENSMUST00000028515 LrpprcQ6PB66 1392 aaKnown RBP12.02□□□□□ -0.49
Chrna1-201ENSMUST00000028515 Ifnlr1Q8CGK5 535 aa12□□□□□ -0.49
Chrna1-201ENSMUST00000028515 Neurod1Q60867 357 aa11.98□□□□□ -0.49
Chrna1-201ENSMUST00000028515 PtprkP35822 1457 aa11.98□□□□□ -0.49
Chrna1-201ENSMUST00000028515 Dhx29Q6PGC1 1365 aaKnown RBP11.97□□□□□ -0.49
Chrna1-201ENSMUST00000028515 Chic2Q9D9G3 165 aa11.97□□□□□ -0.49
Chrna1-201ENSMUST00000028515 NclP09405 707 aaKnown RBP11.95□□□□□ -0.5
Chrna1-201ENSMUST00000028515 Arhgap27A2AB59 869 aa11.95□□□□□ -0.5
Chrna1-201ENSMUST00000028515 Zbtb7cQ8VCZ7 619 aa11.95□□□□□ -0.5
Chrna1-201ENSMUST00000028515 Shroom4Q1W617 1475 aa11.91□□□□□ -0.5
Chrna1-201ENSMUST00000028515 Arhgap35Q91YM2 1499 aa11.9□□□□□ -0.5
Chrna1-201ENSMUST00000028515 Aebp1Q640N1 1128 aa11.9□□□□□ -0.51
Chrna1-201ENSMUST00000028515 Lamc3Q9R0B6 1581 aa11.89□□□□□ -0.51
Chrna1-201ENSMUST00000028515 Sall2Q9QX96 1004 aa11.88□□□□□ -0.51
Chrna1-201ENSMUST00000028515 Grin2bQ01097 1482 aa11.88□□□□□ -0.51
Chrna1-201ENSMUST00000028515 Camsap1A2AHC3 1581 aa11.87□□□□□ -0.51
Chrna1-201ENSMUST00000028515 Carmil1Q6EDY6 1374 aa11.87□□□□□ -0.51
Chrna1-201ENSMUST00000028515 Duox2A2AQ99 1517 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms