RNA–Protein interactions for RNA: ENSMUST00000026188.9

R3hcc1l-201, Transcript of Coiled-coil domain-containing protein R3HCC1L, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene R3hcc1l, Length 4,112 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1l-201ENSMUST00000026188 NischQ80TM9 1593 aa18.93■□□□□ 0.62
R3hcc1l-201ENSMUST00000026188 Rhox8Q6VSS7 320 aa18.56■□□□□ 0.56
R3hcc1l-201ENSMUST00000026188 Abcc9P70170 1546 aa18.1■□□□□ 0.49
R3hcc1l-201ENSMUST00000026188 Gm35339A0A140LHH9 1649 aa17.95■□□□□ 0.46
R3hcc1l-201ENSMUST00000026188 Abcc8B2RUS7 1588 aa17.86■□□□□ 0.45
R3hcc1l-201ENSMUST00000026188 Ccdc136Q3TVA9 1136 aa17.13■□□□□ 0.33
R3hcc1l-201ENSMUST00000026188 ScribQ80U72 1612 aa16.61■□□□□ 0.25
R3hcc1l-201ENSMUST00000026188 Zcchc6Q5BLK4 1491 aaKnown RBP16.6■□□□□ 0.25
R3hcc1l-201ENSMUST00000026188 Rb1cc1Q9ESK9 1588 aa16.56■□□□□ 0.24
R3hcc1l-201ENSMUST00000026188 Kdm5dQ62240 1548 aa16.5■□□□□ 0.23
R3hcc1l-201ENSMUST00000026188 Trim41Q5NCC3 630 aa16.5■□□□□ 0.23
R3hcc1l-201ENSMUST00000026188 Rtl1Q7M732 1744 aa16.48■□□□□ 0.23
R3hcc1l-201ENSMUST00000026188 NacadQ5SWP3 1504 aa16.45■□□□□ 0.22
R3hcc1l-201ENSMUST00000026188 Cngb1E1AZ71 1325 aa16.45■□□□□ 0.22
R3hcc1l-201ENSMUST00000026188 Ccdc180J3QNE4 1664 aa16.42■□□□□ 0.22
R3hcc1l-201ENSMUST00000026188 Esf1Q3V1V3 845 aaKnown RBP16.4■□□□□ 0.22
R3hcc1l-201ENSMUST00000026188 Ehmt2Q9Z148 1263 aaKnown RBP16.4■□□□□ 0.22
R3hcc1l-201ENSMUST00000026188 Dcaf1Q80TR8 1506 aa16.36■□□□□ 0.21
R3hcc1l-201ENSMUST00000026188 Baz1aO88379 1555 aa16.26■□□□□ 0.19
R3hcc1l-201ENSMUST00000026188 Gab3Q8BSM5 595 aa16.22■□□□□ 0.19
R3hcc1l-201ENSMUST00000026188 HrcG5E8J6 738 aa16.1■□□□□ 0.17
R3hcc1l-201ENSMUST00000026188 Sycp2Q9CUU3 1500 aa16.02■□□□□ 0.16
R3hcc1l-201ENSMUST00000026188 Brd4Q9ESU6 1400 aaKnown RBP15.84■□□□□ 0.13
R3hcc1l-201ENSMUST00000026188 Chic1Q8CBW7 227 aa15.84■□□□□ 0.13
R3hcc1l-201ENSMUST00000026188 Cecr2E9Q2Z1 1453 aa15.79■□□□□ 0.12
R3hcc1l-201ENSMUST00000026188 Crybg2B7ZCC2 1516 aa15.79■□□□□ 0.12
R3hcc1l-201ENSMUST00000026188 Myt1lP97500 1187 aa15.76■□□□□ 0.11
R3hcc1l-201ENSMUST00000026188 Smarca2Q6DIC0 1577 aa15.75■□□□□ 0.11
R3hcc1l-201ENSMUST00000026188 Il27Q8K3I6 234 aa15.74■□□□□ 0.11
R3hcc1l-201ENSMUST00000026188 Npm2Q80W85 207 aa15.73■□□□□ 0.11
R3hcc1l-201ENSMUST00000026188 Zeb1Q64318 1117 aa15.59■□□□□ 0.09
R3hcc1l-201ENSMUST00000026188 BicraF8VPZ9 1578 aa15.56■□□□□ 0.08
R3hcc1l-201ENSMUST00000026188 Cep164Q5DU05 1446 aa15.55■□□□□ 0.08
R3hcc1l-201ENSMUST00000026188 Rpgrip1Q9EPQ2 1331 aa15.55■□□□□ 0.08
R3hcc1l-201ENSMUST00000026188 Rsf1E9PWW9 1441 aaKnown RBP15.53■□□□□ 0.08
R3hcc1l-201ENSMUST00000026188 Golga3P55937 1487 aa15.53■□□□□ 0.08
R3hcc1l-201ENSMUST00000026188 Acin1Q9JIX8 1338 aaKnown RBP15.49■□□□□ 0.07
R3hcc1l-201ENSMUST00000026188 CftrP26361 1476 aa15.48■□□□□ 0.07
R3hcc1l-201ENSMUST00000026188 Synj1Q8CHC4 1574 aa15.48■□□□□ 0.07
R3hcc1l-201ENSMUST00000026188 Ccdc88bQ4QRL3 1481 aa15.46■□□□□ 0.07
R3hcc1l-201ENSMUST00000026188 UbtfP25976 765 aaKnown RBP15.41■□□□□ 0.06
R3hcc1l-201ENSMUST00000026188 Pds5bQ4VA53 1446 aaKnown RBP15.32■□□□□ 0.04
R3hcc1l-201ENSMUST00000026188 Smarca4Q3TKT4 1613 aaKnown RBP15.32■□□□□ 0.04
R3hcc1l-201ENSMUST00000026188 Ubl4bQ9CQ84 188 aa15.31■□□□□ 0.04
R3hcc1l-201ENSMUST00000026188 Ap3b1Q9Z1T1 1105 aa15.3■□□□□ 0.04
R3hcc1l-201ENSMUST00000026188 Npm1Q61937 292 aaKnown RBP15.27■□□□□ 0.03
R3hcc1l-201ENSMUST00000026188 Atad2bE9Q166 1460 aaKnown RBP15.26■□□□□ 0.03
R3hcc1l-201ENSMUST00000026188 Kif15Q6P9L6 1387 aa15.22■□□□□ 0.03
R3hcc1l-201ENSMUST00000026188 Iqgap2Q3UQ44 1575 aa15.19■□□□□ 0.02
R3hcc1l-201ENSMUST00000026188 Cttnbp2B9EJA2 1648 aa15.19■□□□□ 0.02
R3hcc1l-201ENSMUST00000026188 Ercc6F8VPZ5 1481 aa15.17■□□□□ 0.02
R3hcc1l-201ENSMUST00000026188 Plekhg3Q4VAC9 1341 aa15.16■□□□□ 0.02
R3hcc1l-201ENSMUST00000026188 Mier1Q5UAK0 511 aa15.11■□□□□ 0.01
R3hcc1l-201ENSMUST00000026188 Fmn1Q05860 1466 aa15.08■□□□□ 0
R3hcc1l-201ENSMUST00000026188 Clip1Q922J3 1391 aa15.01□□□□□ -0.01
R3hcc1l-201ENSMUST00000026188 Lmod2Q3UHZ5 550 aa14.99□□□□□ -0.01
R3hcc1l-201ENSMUST00000026188 Cc2d2aQ8CFW7 1633 aa14.99□□□□□ -0.01
R3hcc1l-201ENSMUST00000026188 Frmpd1A2AKB4 1549 aa14.97□□□□□ -0.01
R3hcc1l-201ENSMUST00000026188 Wdr66E9Q743 1299 aa14.95□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 NefmP08553 848 aa14.95□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 Ube2uB1AUC4 352 aa14.95□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 Cep162Q6ZQ06 1403 aa14.93□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 Rapgef2Q8CHG7 1496 aa14.92□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 Phldb1Q6PDH0 1371 aaKnown RBP14.92□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 Las1lA2BE28 776 aaKnown RBP14.91□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 Ccdc18Q640L5 1455 aa14.91□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 Cux2P70298 1426 aa14.9□□□□□ -0.02
R3hcc1l-201ENSMUST00000026188 Top2bQ64511 1612 aa14.89□□□□□ -0.03
R3hcc1l-201ENSMUST00000026188 Fam50aQ9WV03 339 aaKnown RBP14.89□□□□□ -0.03
R3hcc1l-201ENSMUST00000026188 Dnajc5bQ9CQ94 199 aa14.82□□□□□ -0.04
R3hcc1l-201ENSMUST00000026188 Setd5Q5XJV7 1441 aa14.82□□□□□ -0.04
R3hcc1l-201ENSMUST00000026188 Wdr62Q3U3T8 1523 aa14.82□□□□□ -0.04
R3hcc1l-201ENSMUST00000026188 Ppargc1bQ8VHJ7 1014 aa14.81□□□□□ -0.04
R3hcc1l-201ENSMUST00000026188 Pcgf6Q99NA9 353 aa14.81□□□□□ -0.04
R3hcc1l-201ENSMUST00000026188 Supt5hO55201 1082 aaKnown RBP14.78□□□□□ -0.04
R3hcc1l-201ENSMUST00000026188 Top2aQ01320 1528 aaKnown RBP14.78□□□□□ -0.04
R3hcc1l-201ENSMUST00000026188 Eid3Q3V124 375 aa14.74□□□□□ -0.05
R3hcc1l-201ENSMUST00000026188 PtprkP35822 1457 aa14.72□□□□□ -0.05
R3hcc1l-201ENSMUST00000026188 BlmO88700 1416 aa14.71□□□□□ -0.05
R3hcc1l-201ENSMUST00000026188 Eea1Q8BL66 1411 aa14.71□□□□□ -0.05
R3hcc1l-201ENSMUST00000026188 LrpprcQ6PB66 1392 aaKnown RBP14.69□□□□□ -0.06
R3hcc1l-201ENSMUST00000026188 Baz1bQ9Z277 1479 aa14.68□□□□□ -0.06
R3hcc1l-201ENSMUST00000026188 Fkbp15Q6P9Q6 1216 aaKnown RBP14.64□□□□□ -0.07
R3hcc1l-201ENSMUST00000026188 Dhx29Q6PGC1 1365 aaKnown RBP14.63□□□□□ -0.07
R3hcc1l-201ENSMUST00000026188 TonslQ6NZL6 1363 aa14.61□□□□□ -0.07
R3hcc1l-201ENSMUST00000026188 Arhgap35Q91YM2 1499 aa14.58□□□□□ -0.07
R3hcc1l-201ENSMUST00000026188 Lamc3Q9R0B6 1581 aa14.58□□□□□ -0.08
R3hcc1l-201ENSMUST00000026188 Shroom4Q1W617 1475 aa14.57□□□□□ -0.08
R3hcc1l-201ENSMUST00000026188 Chic2Q9D9G3 165 aa14.55□□□□□ -0.08
R3hcc1l-201ENSMUST00000026188 Grin2bQ01097 1482 aa14.55□□□□□ -0.08
R3hcc1l-201ENSMUST00000026188 Camsap1A2AHC3 1581 aa14.55□□□□□ -0.08
R3hcc1l-201ENSMUST00000026188 Arhgap27A2AB59 869 aa14.53□□□□□ -0.08
R3hcc1l-201ENSMUST00000026188 Ifnlr1Q8CGK5 535 aa14.52□□□□□ -0.08
R3hcc1l-201ENSMUST00000026188 Aebp1Q640N1 1128 aa14.51□□□□□ -0.09
R3hcc1l-201ENSMUST00000026188 Duox2A2AQ99 1517 aa14.51□□□□□ -0.09
R3hcc1l-201ENSMUST00000026188 NrkQ9R0G8 1455 aa14.51□□□□□ -0.09
R3hcc1l-201ENSMUST00000026188 Rad54l2Q99NG0 1466 aa14.5□□□□□ -0.09
R3hcc1l-201ENSMUST00000026188 Sall2Q9QX96 1004 aa14.5□□□□□ -0.09
R3hcc1l-201ENSMUST00000026188 Neurod1Q60867 357 aa14.49□□□□□ -0.09
R3hcc1l-201ENSMUST00000026188 Efcab5A0JP43 1406 aa14.48□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms