RNA–Protein interactions for RNA: ENSMUST00000022356.11

Usp54-201, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-201ENSMUST00000022356 Rhox8Q6VSS7 320 aa14.34□□□□□ -0.11
Usp54-201ENSMUST00000022356 Esf1Q3V1V3 845 aaKnown RBP13.11□□□□□ -0.31
Usp54-201ENSMUST00000022356 NischQ80TM9 1593 aa12.88□□□□□ -0.35
Usp54-201ENSMUST00000022356 Zeb1Q64318 1117 aa12.86□□□□□ -0.35
Usp54-201ENSMUST00000022356 Trim41Q5NCC3 630 aa12.84□□□□□ -0.35
Usp54-201ENSMUST00000022356 Cngb1E1AZ71 1325 aa12.76□□□□□ -0.37
Usp54-201ENSMUST00000022356 Npm2Q80W85 207 aa12.68□□□□□ -0.38
Usp54-201ENSMUST00000022356 Ube2uB1AUC4 352 aa12.57□□□□□ -0.4
Usp54-201ENSMUST00000022356 Ccdc136Q3TVA9 1136 aa12.53□□□□□ -0.4
Usp54-201ENSMUST00000022356 Abcc9P70170 1546 aa12.36□□□□□ -0.43
Usp54-201ENSMUST00000022356 Rpgrip1Q9EPQ2 1331 aa12.26□□□□□ -0.45
Usp54-201ENSMUST00000022356 Las1lA2BE28 776 aaKnown RBP12.24□□□□□ -0.45
Usp54-201ENSMUST00000022356 Myt1lP97500 1187 aa12.21□□□□□ -0.45
Usp54-201ENSMUST00000022356 Il27Q8K3I6 234 aa12.15□□□□□ -0.47
Usp54-201ENSMUST00000022356 Gab3Q8BSM5 595 aa12.13□□□□□ -0.47
Usp54-201ENSMUST00000022356 Npm1Q61937 292 aaKnown RBP12.1□□□□□ -0.47
Usp54-201ENSMUST00000022356 Zcchc6Q5BLK4 1491 aaKnown RBP12.08□□□□□ -0.48
Usp54-201ENSMUST00000022356 Gm35339A0A140LHH9 1649 aa12.04□□□□□ -0.48
Usp54-201ENSMUST00000022356 NclP09405 707 aaKnown RBP11.99□□□□□ -0.49
Usp54-201ENSMUST00000022356 Ttbk1Q6PCN3 1308 aa11.97□□□□□ -0.49
Usp54-201ENSMUST00000022356 Pelp1Q9DBD5 1123 aaKnown RBP11.96□□□□□ -0.5
Usp54-201ENSMUST00000022356 Hdac5Q9Z2V6 1113 aa11.96□□□□□ -0.5
Usp54-201ENSMUST00000022356 Gm13697A2AK42 830 aa11.91□□□□□ -0.5
Usp54-201ENSMUST00000022356 Rtl1Q7M732 1744 aa11.85□□□□□ -0.51
Usp54-201ENSMUST00000022356 Anp32bQ9EST5 272 aaKnown RBP11.84□□□□□ -0.51
Usp54-201ENSMUST00000022356 Wdr66E9Q743 1299 aa11.83□□□□□ -0.51
Usp54-201ENSMUST00000022356 Os9Q8K2C7 672 aa11.82□□□□□ -0.52
Usp54-201ENSMUST00000022356 Stra8P70278 393 aa11.77□□□□□ -0.52
Usp54-201ENSMUST00000022356 Ccdc180J3QNE4 1664 aa11.74□□□□□ -0.53
Usp54-201ENSMUST00000022356 Ubl4bQ9CQ84 188 aa11.74□□□□□ -0.53
Usp54-201ENSMUST00000022356 Abcc8B2RUS7 1588 aa11.74□□□□□ -0.53
Usp54-201ENSMUST00000022356 Ercc6F8VPZ5 1481 aa11.71□□□□□ -0.53
Usp54-201ENSMUST00000022356 HrcG5E8J6 738 aa11.68□□□□□ -0.54
Usp54-201ENSMUST00000022356 Brd4Q9ESU6 1400 aaKnown RBP11.67□□□□□ -0.54
Usp54-201ENSMUST00000022356 NefmP08553 848 aa11.64□□□□□ -0.55
Usp54-201ENSMUST00000022356 Safb2Q80YR5 991 aaKnown RBP11.62□□□□□ -0.55
Usp54-201ENSMUST00000022356 Gm13695A2AK44 830 aa11.61□□□□□ -0.55
Usp54-201ENSMUST00000022356 NacadQ5SWP3 1504 aa11.6□□□□□ -0.55
Usp54-201ENSMUST00000022356 UbtfP25976 765 aaKnown RBP11.58□□□□□ -0.56
Usp54-201ENSMUST00000022356 Ifnlr1Q8CGK5 535 aa11.57□□□□□ -0.56
Usp54-201ENSMUST00000022356 Cdk11bP24788 784 aaKnown RBP11.57□□□□□ -0.56
Usp54-201ENSMUST00000022356 Ehmt2Q9Z148 1263 aaKnown RBP11.55□□□□□ -0.56
Usp54-201ENSMUST00000022356 Fam50aQ9WV03 339 aaKnown RBP11.55□□□□□ -0.56
Usp54-201ENSMUST00000022356 Rb1cc1Q9ESK9 1588 aa11.53□□□□□ -0.56
Usp54-201ENSMUST00000022356 Ap3b1Q9Z1T1 1105 aa11.51□□□□□ -0.57
Usp54-201ENSMUST00000022356 DiexfQ8BTT6 772 aaKnown RBP11.48□□□□□ -0.57
Usp54-201ENSMUST00000022356 Hnrnpul2Q00PI9 745 aaKnown RBP11.48□□□□□ -0.57
Usp54-201ENSMUST00000022356 Atp1b4Q99ME6 356 aa11.46□□□□□ -0.58
Usp54-201ENSMUST00000022356 Clstn2Q9ER65 966 aa11.42□□□□□ -0.58
Usp54-201ENSMUST00000022356 NrdcQ8BHG1 1161 aa11.42□□□□□ -0.58
Usp54-201ENSMUST00000022356 Pds5bQ4VA53 1446 aaKnown RBP11.41□□□□□ -0.58
Usp54-201ENSMUST00000022356 Rsf1E9PWW9 1441 aaKnown RBP11.41□□□□□ -0.58
Usp54-201ENSMUST00000022356 Cep164Q5DU05 1446 aa11.38□□□□□ -0.59
Usp54-201ENSMUST00000022356 Plppr3Q7TPB0 716 aa11.38□□□□□ -0.59
Usp54-201ENSMUST00000022356 Slc24a1Q91WD8 1130 aa11.37□□□□□ -0.59
Usp54-201ENSMUST00000022356 Ccdc18Q640L5 1455 aa11.37□□□□□ -0.59
Usp54-201ENSMUST00000022356 Fkbp15Q6P9Q6 1216 aaKnown RBP11.33□□□□□ -0.6
Usp54-201ENSMUST00000022356 Erich6D3Z6S9 713 aa11.32□□□□□ -0.6
Usp54-201ENSMUST00000022356 NeflP08551 543 aa11.32□□□□□ -0.6
Usp54-201ENSMUST00000022356 Neurod1Q60867 357 aa11.31□□□□□ -0.6
Usp54-201ENSMUST00000022356 Ccer2J3QPU5 274 aa11.26□□□□□ -0.61
Usp54-201ENSMUST00000022356 Zbtb7cQ8VCZ7 619 aa11.26□□□□□ -0.61
Usp54-201ENSMUST00000022356 Kif15Q6P9L6 1387 aa11.24□□□□□ -0.61
Usp54-201ENSMUST00000022356 Lmod2Q3UHZ5 550 aa11.23□□□□□ -0.61
Usp54-201ENSMUST00000022356 Rsph4aQ8BYM7 716 aa11.21□□□□□ -0.62
Usp54-201ENSMUST00000022356 Zfp777B9EKF4 885 aa11.18□□□□□ -0.62
Usp54-201ENSMUST00000022356 Ppp1r18Q8BQ30 594 aa11.17□□□□□ -0.62
Usp54-201ENSMUST00000022356 Chic1Q8CBW7 227 aa11.17□□□□□ -0.62
Usp54-201ENSMUST00000022356 Nlrp6Q91WS2 869 aa11.17□□□□□ -0.62
Usp54-201ENSMUST00000022356 MyclP10166 368 aa11.13□□□□□ -0.63
Usp54-201ENSMUST00000022356 Acin1Q9JIX8 1338 aaKnown RBP11.12□□□□□ -0.63
Usp54-201ENSMUST00000022356 Baz1aO88379 1555 aa11.12□□□□□ -0.63
Usp54-201ENSMUST00000022356 Dcaf1Q80TR8 1506 aa11.09□□□□□ -0.63
Usp54-201ENSMUST00000022356 Clip1Q922J3 1391 aa11.07□□□□□ -0.64
Usp54-201ENSMUST00000022356 Arhgap27A2AB59 869 aa11.06□□□□□ -0.64
Usp54-201ENSMUST00000022356 TonslQ6NZL6 1363 aa11.05□□□□□ -0.64
Usp54-201ENSMUST00000022356 Tnnt3Q9QZ47 272 aa11.04□□□□□ -0.64
Usp54-201ENSMUST00000022356 Eif5bQ05D44 1216 aaKnown RBP11.04□□□□□ -0.64
Usp54-201ENSMUST00000022356 IqubQ8CDK3 788 aa11.04□□□□□ -0.64
Usp54-201ENSMUST00000022356 P3h3Q8CG70 732 aa11.03□□□□□ -0.64
Usp54-201ENSMUST00000022356 Phldb1Q6PDH0 1371 aaKnown RBP11.02□□□□□ -0.65
Usp54-201ENSMUST00000022356 Kdm5dQ62240 1548 aa10.98□□□□□ -0.65
Usp54-201ENSMUST00000022356 Pabpn1Q8CCS6 302 aaKnown RBP10.98□□□□□ -0.65
Usp54-201ENSMUST00000022356 HdgfP51859 237 aaKnown RBP10.97□□□□□ -0.65
Usp54-201ENSMUST00000022356 Eif4g2Q62448 906 aaKnown RBP10.94□□□□□ -0.66
Usp54-201ENSMUST00000022356 Plekhg3Q4VAC9 1341 aa10.94□□□□□ -0.66
Usp54-201ENSMUST00000022356 MlecQ6ZQI3 291 aaKnown RBP10.92□□□□□ -0.66
Usp54-201ENSMUST00000022356 Ggt6Q6PDE7 497 aa10.92□□□□□ -0.66
Usp54-201ENSMUST00000022356 Golga3P55937 1487 aa10.91□□□□□ -0.66
Usp54-201ENSMUST00000022356 Dhx57Q6P5D3 1388 aaKnown RBP10.91□□□□□ -0.66
Usp54-201ENSMUST00000022356 AknaQ80VW7 1404 aa10.9□□□□□ -0.66
Usp54-201ENSMUST00000022356 Atad2bE9Q166 1460 aaKnown RBP10.89□□□□□ -0.67
Usp54-201ENSMUST00000022356 BlmO88700 1416 aa10.88□□□□□ -0.67
Usp54-201ENSMUST00000022356 Sycp2Q9CUU3 1500 aa10.88□□□□□ -0.67
Usp54-201ENSMUST00000022356 Setd5Q5XJV7 1441 aa10.88□□□□□ -0.67
Usp54-201ENSMUST00000022356 CenpbP27790 599 aa10.88□□□□□ -0.67
Usp54-201ENSMUST00000022356 Srpk2O54781 681 aaKnown RBP10.87□□□□□ -0.67
Usp54-201ENSMUST00000022356 Lemd3Q9WU40 921 aa10.86□□□□□ -0.67
Usp54-201ENSMUST00000022356 Mtus2Q3UHD3 1353 aa10.85□□□□□ -0.67
Usp54-201ENSMUST00000022356 4930567H17RikQ3V0K5 233 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms