RNA–Protein interactions for RNA: ENSMUST00000018737.12

Sparc-201, Transcript of SPARC, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sparc, Length 2,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sparc-201ENSMUST00000018737 NischQ80TM9 1593 aa23.08■■□□□ 1.29
Sparc-201ENSMUST00000018737 Gm35339A0A140LHH9 1649 aa22.73■■□□□ 1.23
Sparc-201ENSMUST00000018737 Abcc9P70170 1546 aa22.46■■□□□ 1.19
Sparc-201ENSMUST00000018737 Abcc8B2RUS7 1588 aa21.92■■□□□ 1.1
Sparc-201ENSMUST00000018737 Rhox8Q6VSS7 320 aa21.34■■□□□ 1.01
Sparc-201ENSMUST00000018737 Rtl1Q7M732 1744 aa21.27■■□□□ 1
Sparc-201ENSMUST00000018737 Ccdc180J3QNE4 1664 aa20.87■□□□□ 0.93
Sparc-201ENSMUST00000018737 Dcaf1Q80TR8 1506 aa20.51■□□□□ 0.87
Sparc-201ENSMUST00000018737 Zcchc6Q5BLK4 1491 aaKnown RBP20.48■□□□□ 0.87
Sparc-201ENSMUST00000018737 ScribQ80U72 1612 aa20.4■□□□□ 0.86
Sparc-201ENSMUST00000018737 Rb1cc1Q9ESK9 1588 aa20.23■□□□□ 0.83
Sparc-201ENSMUST00000018737 Kdm5dQ62240 1548 aa20.03■□□□□ 0.8
Sparc-201ENSMUST00000018737 Baz1aO88379 1555 aa20.02■□□□□ 0.8
Sparc-201ENSMUST00000018737 NacadQ5SWP3 1504 aa19.86■□□□□ 0.77
Sparc-201ENSMUST00000018737 HrcG5E8J6 738 aa19.85■□□□□ 0.77
Sparc-201ENSMUST00000018737 Ccdc136Q3TVA9 1136 aa19.79■□□□□ 0.76
Sparc-201ENSMUST00000018737 Rpgrip1Q9EPQ2 1331 aa19.77■□□□□ 0.76
Sparc-201ENSMUST00000018737 Crybg2B7ZCC2 1516 aa19.66■□□□□ 0.74
Sparc-201ENSMUST00000018737 Smarca2Q6DIC0 1577 aa19.58■□□□□ 0.73
Sparc-201ENSMUST00000018737 Acin1Q9JIX8 1338 aaKnown RBP19.47■□□□□ 0.71
Sparc-201ENSMUST00000018737 Sycp2Q9CUU3 1500 aa19.43■□□□□ 0.7
Sparc-201ENSMUST00000018737 Trim41Q5NCC3 630 aa19.42■□□□□ 0.7
Sparc-201ENSMUST00000018737 Ehmt2Q9Z148 1263 aaKnown RBP19.27■□□□□ 0.68
Sparc-201ENSMUST00000018737 Cep164Q5DU05 1446 aa19.26■□□□□ 0.67
Sparc-201ENSMUST00000018737 Brd4Q9ESU6 1400 aaKnown RBP19.09■□□□□ 0.65
Sparc-201ENSMUST00000018737 Cecr2E9Q2Z1 1453 aa19.05■□□□□ 0.64
Sparc-201ENSMUST00000018737 BicraF8VPZ9 1578 aa18.99■□□□□ 0.63
Sparc-201ENSMUST00000018737 Rsf1E9PWW9 1441 aaKnown RBP18.97■□□□□ 0.63
Sparc-201ENSMUST00000018737 Synj1Q8CHC4 1574 aa18.93■□□□□ 0.62
Sparc-201ENSMUST00000018737 Golga3P55937 1487 aa18.92■□□□□ 0.62
Sparc-201ENSMUST00000018737 Cngb1E1AZ71 1325 aa18.92■□□□□ 0.62
Sparc-201ENSMUST00000018737 Chic1Q8CBW7 227 aa18.9■□□□□ 0.62
Sparc-201ENSMUST00000018737 Ccdc88bQ4QRL3 1481 aa18.84■□□□□ 0.61
Sparc-201ENSMUST00000018737 CftrP26361 1476 aa18.8■□□□□ 0.6
Sparc-201ENSMUST00000018737 Top2bQ64511 1612 aa18.73■□□□□ 0.59
Sparc-201ENSMUST00000018737 Cttnbp2B9EJA2 1648 aa18.72■□□□□ 0.59
Sparc-201ENSMUST00000018737 Gab3Q8BSM5 595 aa18.72■□□□□ 0.59
Sparc-201ENSMUST00000018737 Pcgf6Q99NA9 353 aa18.63■□□□□ 0.57
Sparc-201ENSMUST00000018737 Esf1Q3V1V3 845 aaKnown RBP18.62■□□□□ 0.57
Sparc-201ENSMUST00000018737 Smarca4Q3TKT4 1613 aaKnown RBP18.61■□□□□ 0.57
Sparc-201ENSMUST00000018737 Cc2d2aQ8CFW7 1633 aa18.51■□□□□ 0.55
Sparc-201ENSMUST00000018737 Fmn1Q05860 1466 aa18.42■□□□□ 0.54
Sparc-201ENSMUST00000018737 Rapgef2Q8CHG7 1496 aa18.38■□□□□ 0.53
Sparc-201ENSMUST00000018737 Top2aQ01320 1528 aaKnown RBP18.36■□□□□ 0.53
Sparc-201ENSMUST00000018737 Iqgap2Q3UQ44 1575 aa18.34■□□□□ 0.53
Sparc-201ENSMUST00000018737 Supt5hO55201 1082 aaKnown RBP18.34■□□□□ 0.53
Sparc-201ENSMUST00000018737 Mier1Q5UAK0 511 aa18.33■□□□□ 0.53
Sparc-201ENSMUST00000018737 NefmP08553 848 aa18.33■□□□□ 0.52
Sparc-201ENSMUST00000018737 Atad2bE9Q166 1460 aaKnown RBP18.22■□□□□ 0.51
Sparc-201ENSMUST00000018737 Cep162Q6ZQ06 1403 aa18.21■□□□□ 0.51
Sparc-201ENSMUST00000018737 Zeb1Q64318 1117 aa18.12■□□□□ 0.49
Sparc-201ENSMUST00000018737 TnnQ80Z71 1560 aa18.12■□□□□ 0.49
Sparc-201ENSMUST00000018737 Pds5bQ4VA53 1446 aaKnown RBP18.11■□□□□ 0.49
Sparc-201ENSMUST00000018737 Eif4g1Q6NZJ6 1600 aaKnown RBP18.1■□□□□ 0.49
Sparc-201ENSMUST00000018737 UbtfP25976 765 aaKnown RBP18.05■□□□□ 0.48
Sparc-201ENSMUST00000018737 Myt1lP97500 1187 aa18.02■□□□□ 0.48
Sparc-201ENSMUST00000018737 Npm2Q80W85 207 aa17.99■□□□□ 0.47
Sparc-201ENSMUST00000018737 Frmpd1A2AKB4 1549 aa17.97■□□□□ 0.47
Sparc-201ENSMUST00000018737 Wdr62Q3U3T8 1523 aa17.97■□□□□ 0.47
Sparc-201ENSMUST00000018737 Clip1Q922J3 1391 aa17.92■□□□□ 0.46
Sparc-201ENSMUST00000018737 Lamc3Q9R0B6 1581 aa17.92■□□□□ 0.46
Sparc-201ENSMUST00000018737 Sall2Q9QX96 1004 aa17.92■□□□□ 0.46
Sparc-201ENSMUST00000018737 Arhgap35Q91YM2 1499 aa17.89■□□□□ 0.45
Sparc-201ENSMUST00000018737 NrkQ9R0G8 1455 aa17.88■□□□□ 0.45
Sparc-201ENSMUST00000018737 PtprkP35822 1457 aa17.85■□□□□ 0.45
Sparc-201ENSMUST00000018737 Neurod1Q60867 357 aa17.84■□□□□ 0.45
Sparc-201ENSMUST00000018737 Las1lA2BE28 776 aaKnown RBP17.81■□□□□ 0.44
Sparc-201ENSMUST00000018737 Unc13aQ4KUS2 1712 aa17.8■□□□□ 0.44
Sparc-201ENSMUST00000018737 Ncapd3Q6ZQK0 1506 aa17.79■□□□□ 0.44
Sparc-201ENSMUST00000018737 Plekhg3Q4VAC9 1341 aa17.79■□□□□ 0.44
Sparc-201ENSMUST00000018737 Ercc6F8VPZ5 1481 aa17.78■□□□□ 0.44
Sparc-201ENSMUST00000018737 Kif15Q6P9L6 1387 aa17.78■□□□□ 0.44
Sparc-201ENSMUST00000018737 Shroom4Q1W617 1475 aa17.78■□□□□ 0.44
Sparc-201ENSMUST00000018737 Camsap1A2AHC3 1581 aa17.78■□□□□ 0.44
Sparc-201ENSMUST00000018737 Map3k1P53349 1493 aa17.74■□□□□ 0.43
Sparc-201ENSMUST00000018737 Eea1Q8BL66 1411 aa17.74■□□□□ 0.43
Sparc-201ENSMUST00000018737 Arap1Q4LDD4 1452 aa17.74■□□□□ 0.43
Sparc-201ENSMUST00000018737 Aebp2Q9Z248 504 aaKnown RBP17.72■□□□□ 0.43
Sparc-201ENSMUST00000018737 Arhgef5E9Q7D5 1581 aa17.69■□□□□ 0.42
Sparc-201ENSMUST00000018737 Il27Q8K3I6 234 aa17.68■□□□□ 0.42
Sparc-201ENSMUST00000018737 Ccdc18Q640L5 1455 aa17.67■□□□□ 0.42
Sparc-201ENSMUST00000018737 Wdr66E9Q743 1299 aa17.67■□□□□ 0.42
Sparc-201ENSMUST00000018737 Grin2bQ01097 1482 aa17.66■□□□□ 0.42
Sparc-201ENSMUST00000018737 TonslQ6NZL6 1363 aa17.66■□□□□ 0.42
Sparc-201ENSMUST00000018737 ClspnQ80YR7 1315 aa17.65■□□□□ 0.42
Sparc-201ENSMUST00000018737 Setd5Q5XJV7 1441 aa17.63■□□□□ 0.41
Sparc-201ENSMUST00000018737 Mroh2bQ7M6Y6 1581 aa17.61■□□□□ 0.41
Sparc-201ENSMUST00000018737 Erich3F6QRE9 1637 aa17.58■□□□□ 0.4
Sparc-201ENSMUST00000018737 Tiam1Q60610 1591 aa17.58■□□□□ 0.4
Sparc-201ENSMUST00000018737 Kdm5bQ80Y84 1544 aa17.57■□□□□ 0.4
Sparc-201ENSMUST00000018737 AqrQ8CFQ3 1481 aaKnown RBP17.55■□□□□ 0.4
Sparc-201ENSMUST00000018737 Ap3b1Q9Z1T1 1105 aa17.54■□□□□ 0.4
Sparc-201ENSMUST00000018737 Ankrd26Q811D2 1581 aa17.54■□□□□ 0.4
Sparc-201ENSMUST00000018737 Baz1bQ9Z277 1479 aa17.53■□□□□ 0.4
Sparc-201ENSMUST00000018737 Phldb1Q6PDH0 1371 aaKnown RBP17.51■□□□□ 0.39
Sparc-201ENSMUST00000018737 Anks4bQ8K3X6 423 aa17.51■□□□□ 0.39
Sparc-201ENSMUST00000018737 TchhA0A0B4J1F9 1599 aa17.5■□□□□ 0.39
Sparc-201ENSMUST00000018737 Naip1Q9QWK5 1403 aa17.5■□□□□ 0.39
Sparc-201ENSMUST00000018737 Thoc2B1AZI6 1594 aaKnown RBP17.48■□□□□ 0.39
Sparc-201ENSMUST00000018737 Cux2P70298 1426 aa17.46■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms