RNA–Protein interactions for RNA: ENSMUST00000007250.13

Msh5-201, Transcript of MutS protein homolog 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh5, Length 2,886 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5-201ENSMUST00000007250 NischQ80TM9 1593 aa21.47■■□□□ 1.03
Msh5-201ENSMUST00000007250 Gm35339A0A140LHH9 1649 aa20.98■□□□□ 0.95
Msh5-201ENSMUST00000007250 Abcc9P70170 1546 aa20.69■□□□□ 0.9
Msh5-201ENSMUST00000007250 Abcc8B2RUS7 1588 aa20.45■□□□□ 0.86
Msh5-201ENSMUST00000007250 Rhox8Q6VSS7 320 aa19.94■□□□□ 0.78
Msh5-201ENSMUST00000007250 ScribQ80U72 1612 aa19.34■□□□□ 0.69
Msh5-201ENSMUST00000007250 Rtl1Q7M732 1744 aa19.18■□□□□ 0.66
Msh5-201ENSMUST00000007250 Rpgrip1Q9EPQ2 1331 aa19.14■□□□□ 0.65
Msh5-201ENSMUST00000007250 Kdm5dQ62240 1548 aa18.92■□□□□ 0.62
Msh5-201ENSMUST00000007250 Ccdc180J3QNE4 1664 aa18.91■□□□□ 0.62
Msh5-201ENSMUST00000007250 Rb1cc1Q9ESK9 1588 aa18.78■□□□□ 0.6
Msh5-201ENSMUST00000007250 NacadQ5SWP3 1504 aa18.74■□□□□ 0.59
Msh5-201ENSMUST00000007250 Zcchc6Q5BLK4 1491 aaKnown RBP18.73■□□□□ 0.59
Msh5-201ENSMUST00000007250 Dcaf1Q80TR8 1506 aa18.71■□□□□ 0.59
Msh5-201ENSMUST00000007250 Ccdc136Q3TVA9 1136 aa18.6■□□□□ 0.57
Msh5-201ENSMUST00000007250 Acin1Q9JIX8 1338 aaKnown RBP18.58■□□□□ 0.56
Msh5-201ENSMUST00000007250 Ehmt2Q9Z148 1263 aaKnown RBP18.54■□□□□ 0.56
Msh5-201ENSMUST00000007250 Pcgf6Q99NA9 353 aa18.45■□□□□ 0.54
Msh5-201ENSMUST00000007250 Baz1aO88379 1555 aa18.45■□□□□ 0.54
Msh5-201ENSMUST00000007250 Sycp2Q9CUU3 1500 aa18.36■□□□□ 0.53
Msh5-201ENSMUST00000007250 BicraF8VPZ9 1578 aa18.07■□□□□ 0.48
Msh5-201ENSMUST00000007250 HrcG5E8J6 738 aa18.05■□□□□ 0.48
Msh5-201ENSMUST00000007250 Crybg2B7ZCC2 1516 aa17.99■□□□□ 0.47
Msh5-201ENSMUST00000007250 Smarca2Q6DIC0 1577 aa17.98■□□□□ 0.47
Msh5-201ENSMUST00000007250 Trim41Q5NCC3 630 aa17.97■□□□□ 0.47
Msh5-201ENSMUST00000007250 Supt5hO55201 1082 aaKnown RBP17.94■□□□□ 0.46
Msh5-201ENSMUST00000007250 Cecr2E9Q2Z1 1453 aa17.94■□□□□ 0.46
Msh5-201ENSMUST00000007250 Neurod1Q60867 357 aa17.83■□□□□ 0.45
Msh5-201ENSMUST00000007250 Cngb1E1AZ71 1325 aa17.78■□□□□ 0.44
Msh5-201ENSMUST00000007250 Esf1Q3V1V3 845 aaKnown RBP17.73■□□□□ 0.43
Msh5-201ENSMUST00000007250 Las1lA2BE28 776 aaKnown RBP17.63■□□□□ 0.41
Msh5-201ENSMUST00000007250 Brd4Q9ESU6 1400 aaKnown RBP17.61■□□□□ 0.41
Msh5-201ENSMUST00000007250 Chic1Q8CBW7 227 aa17.61■□□□□ 0.41
Msh5-201ENSMUST00000007250 Cep164Q5DU05 1446 aa17.6■□□□□ 0.41
Msh5-201ENSMUST00000007250 Synj1Q8CHC4 1574 aa17.58■□□□□ 0.4
Msh5-201ENSMUST00000007250 Gab3Q8BSM5 595 aa17.56■□□□□ 0.4
Msh5-201ENSMUST00000007250 Rsf1E9PWW9 1441 aaKnown RBP17.55■□□□□ 0.4
Msh5-201ENSMUST00000007250 Zeb1Q64318 1117 aa17.52■□□□□ 0.39
Msh5-201ENSMUST00000007250 CftrP26361 1476 aa17.49■□□□□ 0.39
Msh5-201ENSMUST00000007250 Smarca4Q3TKT4 1613 aaKnown RBP17.47■□□□□ 0.39
Msh5-201ENSMUST00000007250 Ccdc88bQ4QRL3 1481 aa17.46■□□□□ 0.39
Msh5-201ENSMUST00000007250 1700123L14RikQ3V2K7 440 aa17.41■□□□□ 0.38
Msh5-201ENSMUST00000007250 Golga3P55937 1487 aa17.38■□□□□ 0.37
Msh5-201ENSMUST00000007250 Iqgap2Q3UQ44 1575 aa17.35■□□□□ 0.37
Msh5-201ENSMUST00000007250 Pds5bQ4VA53 1446 aaKnown RBP17.34■□□□□ 0.37
Msh5-201ENSMUST00000007250 Atad2bE9Q166 1460 aaKnown RBP17.33■□□□□ 0.37
Msh5-201ENSMUST00000007250 Csrnp3P59055 597 aa17.32■□□□□ 0.36
Msh5-201ENSMUST00000007250 Cttnbp2B9EJA2 1648 aa17.3■□□□□ 0.36
Msh5-201ENSMUST00000007250 CenpbP27790 599 aa17.22■□□□□ 0.35
Msh5-201ENSMUST00000007250 Sall2Q9QX96 1004 aa17.21■□□□□ 0.35
Msh5-201ENSMUST00000007250 Anks4bQ8K3X6 423 aa17.18■□□□□ 0.34
Msh5-201ENSMUST00000007250 Top2bQ64511 1612 aa17.17■□□□□ 0.34
Msh5-201ENSMUST00000007250 Cc2d2aQ8CFW7 1633 aa17.15■□□□□ 0.34
Msh5-201ENSMUST00000007250 Il27Q8K3I6 234 aa17.13■□□□□ 0.33
Msh5-201ENSMUST00000007250 Frmpd1A2AKB4 1549 aa17.11■□□□□ 0.33
Msh5-201ENSMUST00000007250 Ercc6F8VPZ5 1481 aa17.09■□□□□ 0.33
Msh5-201ENSMUST00000007250 Dnajc5bQ9CQ94 199 aa17.07■□□□□ 0.32
Msh5-201ENSMUST00000007250 Myt1Q8CFC2 1127 aa17.07■□□□□ 0.32
Msh5-201ENSMUST00000007250 NefmP08553 848 aa17.05■□□□□ 0.32
Msh5-201ENSMUST00000007250 Wdr62Q3U3T8 1523 aa17.02■□□□□ 0.31
Msh5-201ENSMUST00000007250 Gm38655A0A286YDK6 273 aa16.97■□□□□ 0.31
Msh5-201ENSMUST00000007250 Mier1Q5UAK0 511 aa16.97■□□□□ 0.31
Msh5-201ENSMUST00000007250 Ubl4bQ9CQ84 188 aa16.96■□□□□ 0.31
Msh5-201ENSMUST00000007250 Wdr66E9Q743 1299 aa16.96■□□□□ 0.31
Msh5-201ENSMUST00000007250 Kif15Q6P9L6 1387 aa16.94■□□□□ 0.3
Msh5-201ENSMUST00000007250 Aplp2Q06335 707 aa16.92■□□□□ 0.3
Msh5-201ENSMUST00000007250 Myt1lP97500 1187 aa16.91■□□□□ 0.3
Msh5-201ENSMUST00000007250 DiexfQ8BTT6 772 aaKnown RBP16.9■□□□□ 0.3
Msh5-201ENSMUST00000007250 Cdk11bP24788 784 aaKnown RBP16.89■□□□□ 0.29
Msh5-201ENSMUST00000007250 Npm2Q80W85 207 aa16.88■□□□□ 0.29
Msh5-201ENSMUST00000007250 Fmn1Q05860 1466 aa16.88■□□□□ 0.29
Msh5-201ENSMUST00000007250 Ppargc1bQ8VHJ7 1014 aa16.86■□□□□ 0.29
Msh5-201ENSMUST00000007250 Thoc2B1AZI6 1594 aaKnown RBP16.84■□□□□ 0.29
Msh5-201ENSMUST00000007250 Top2aQ01320 1528 aaKnown RBP16.84■□□□□ 0.29
Msh5-201ENSMUST00000007250 Rapgef2Q8CHG7 1496 aa16.84■□□□□ 0.29
Msh5-201ENSMUST00000007250 Nop58Q6DFW4 536 aaKnown RBP16.83■□□□□ 0.28
Msh5-201ENSMUST00000007250 Phldb1Q6PDH0 1371 aaKnown RBP16.82■□□□□ 0.28
Msh5-201ENSMUST00000007250 UbtfP25976 765 aaKnown RBP16.81■□□□□ 0.28
Msh5-201ENSMUST00000007250 Unc13aQ4KUS2 1712 aa16.81■□□□□ 0.28
Msh5-201ENSMUST00000007250 Aebp2Q9Z248 504 aaKnown RBP16.76■□□□□ 0.27
Msh5-201ENSMUST00000007250 Cep162Q6ZQ06 1403 aa16.75■□□□□ 0.27
Msh5-201ENSMUST00000007250 Npm1Q61937 292 aaKnown RBP16.73■□□□□ 0.27
Msh5-201ENSMUST00000007250 Cux2P70298 1426 aa16.71■□□□□ 0.27
Msh5-201ENSMUST00000007250 Bcl11aQ9QYE3 773 aa16.67■□□□□ 0.26
Msh5-201ENSMUST00000007250 Lamc3Q9R0B6 1581 aa16.65■□□□□ 0.26
Msh5-201ENSMUST00000007250 Plekhg3Q4VAC9 1341 aa16.62■□□□□ 0.25
Msh5-201ENSMUST00000007250 TnnQ80Z71 1560 aa16.61■□□□□ 0.25
Msh5-201ENSMUST00000007250 PtprkP35822 1457 aa16.6■□□□□ 0.25
Msh5-201ENSMUST00000007250 Fam135aQ6NS59 1506 aa16.58■□□□□ 0.25
Msh5-201ENSMUST00000007250 ClspnQ80YR7 1315 aa16.58■□□□□ 0.24
Msh5-201ENSMUST00000007250 Ccdc18Q640L5 1455 aa16.58■□□□□ 0.24
Msh5-201ENSMUST00000007250 Camsap1A2AHC3 1581 aa16.55■□□□□ 0.24
Msh5-201ENSMUST00000007250 Fam71e1A1L3C1 212 aa16.54■□□□□ 0.24
Msh5-201ENSMUST00000007250 Clip1Q922J3 1391 aa16.54■□□□□ 0.24
Msh5-201ENSMUST00000007250 Eif4g1Q6NZJ6 1600 aaKnown RBP16.54■□□□□ 0.24
Msh5-201ENSMUST00000007250 Ap3b1Q9Z1T1 1105 aa16.53■□□□□ 0.24
Msh5-201ENSMUST00000007250 Mapk8ip2Q9ERE9 830 aa16.48■□□□□ 0.23
Msh5-201ENSMUST00000007250 Arhgap35Q91YM2 1499 aa16.48■□□□□ 0.23
Msh5-201ENSMUST00000007250 LrpprcQ6PB66 1392 aaKnown RBP16.43■□□□□ 0.22
Msh5-201ENSMUST00000007250 Grin2bQ01097 1482 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms